Ashley (Contractor) M Spoljaric

Metagenomics analysis of groundwater, surface water, and sand samples at Jeorse Park in East Chicago, Indiana, 2017

This dataset provides results of a targeted bacterial community metagenomic analysis of surface water, groundwater, and sand samples at Jeorse Park on Lake Michigan in East Chicago, Indiana. Seventy-two samples were collected from 6 sites in 2017. Samples were analyzed for the 16S ribosomal RNA (16S rRNA) gene (the S in 16S refers to the rate of sedimentation, in Svedberg units, of the RNA molecule in a centrifugal field), and one sample was excluded because it produced too few reads. The 16S rRNA gene is the most conserved of three rRNA genes (16S, 23S, and 5S) and is considered the most reliable for identification and taxonomic classification of bacterial species (Bouchet and others, 2008). Taxonomic analysis...

Tags: 16S rRNA, East Chicago, IN, Great Lakes, Jeorse Park, Lake Michigan, All tags... Northwest Indiana, bacteria, beach health, gene sequence analysis, nearshore, Fewer tags

Cladophora biomass and supporting data collected in the Great Lakes, 2018 (ver. 1.1, September 2020)

Note: An error was discovered in the BenthicBiomas Table, mostly in designation of BDLs and zeros. Data are undergoing further QC and the corrected dataset will be posted soon. This dataset records Cladophora and associated submerged aquatic vegetation (SAV) biomass collected approximately monthly during the growing season of 2018 at stations located along the U.S. shoreline of Lakes Michigan, Huron, Erie, and Ontario. It also records a variety of supporting data collected at Cladophora measurement stations. These supporting data include: - seasonal time series of light, currents, wave action, temperature, specific conductivity, turbidity, pH, phycocyanin, chlorophyll, and dissolved oxygen from moored sensors...

Categories: Data, Data Release - Revised; Tags: Aquatic Biology, CTD measurement, Ecology, Great Lakes Region, Lake Erie, All tags... Lake Huron, Lake Michigan, Lake Ontario, Limnology, USGS Science Data Catalog (SDC), Water Quality, acoustic Doppler current profiling, algae, algal blooms, aquatic biology, aquatic vegetation, benthos, biota, environment, eutrophication, freshwater ecosystems, habitat alteration, inlandWaters, invasive species, mollusks, nuisance species, nutrient content (water), optical methods, oxygen content (water), phosphorus, submerged aquatic vegetation, surface water quality, suspended material (water), turbidity, water pH, water sampling, water temperature, Fewer tags

This dataset records Cladophora and associated submerged aquatic vegetation (SAV) biomass collected approximately monthly during the growing season of 2019 at stations located along the U.S. shoreline of Lakes Michigan, Huron, Erie, and Ontario. It also records a variety of supporting data collected at Cladophora measurement stations. These supporting data include: - seasonal time series of light, currents, wave action, temperature, specific conductivity, turbidity, pH, phycocyanin, chlorophyll, and dissolved oxygen from moored sensors at a subset of stations; - measurements of Secchi disk depth and water chemistry; - water column profiles of temperature, specific conductivity, turbidity, pH, phycocyanin, chlorophyll,...

Categories: Data, Data Release - Revised; Tags: CTD measurement, Great Lakes Region, Lake Erie, Lake Huron, Lake Michigan, All tags... Lake Ontario, USGS Science Data Catalog (SDC), acoustic Doppler current profiling, algae, algal blooms, aquatic biology, aquatic vegetation, benthos, biota, environment, eutrophication, freshwater ecosystems, habitat alteration and disturbance, inlandWaters, invasive species, mollusks, nuisance species, nutrient content (water), optical methods, oxygen content (water), phosphorus, submerged aquatic vegetation, surface water quality, suspended material (water), turbidity, water pH, water sampling, water temperature, Fewer tags

Round goby eDNA survey, evaluation, and laboratory data in Lakes Michigan and Huron 2016-2017

Data included are from a series of field sample collections from Lakes Michigan and Huron, and laboratory mesocosms targeting the round goby fish (Neogobius melanostomus). The round goby is a benthic fish that has heavily invaded four of the five Laurentian Great Lakes. Because it inhabits a variety of substrates, including coastal breakwaters, traditional methods (e.g., trawling, trapping) are inadequate to quantify overall population size. Environmental DNA (eDNA) may be a viable option for improving detection and quantification of the species. Field data include number of round goby caught and associated ambient conditions of the aquatic matrix (temperature, pH, turbidity, conductivity, dissolved oxygen). Mesocosm...

Categories: Data; Tags: Indiana Dunes National Lakeshore, Lake Huron, Lake Michigan, USGS Science Data Catalog (SDC), biota, All tags... environment, environmental DNA, field methods, freshwater ecosystems, invasive species, Fewer tags

This dataset records Cladophora and associated benthic algae, collectively Cladophora community or submerged aquatic vegetation (SAV), biomass collected during the growing season of 2021 at stations located along the U.S. shoreline of Lakes Michigan, Huron, Erie, and Ontario. It also records a variety of supporting data collected at Cladophora measurement stations. These supporting data include: - seasonal time series of light, currents, wave action, temperature, specific conductivity, turbidity, pH, phycocyanin, chlorophyll, and dissolved oxygen from moored sensors at a subset of stations; - measurements of Secchi disk depth and water chemistry; - water column profiles of PAR, temperature, specific conductivity,...

Categories: Data; Tags: Aquatic Biology, CTD measurement, Ecology, Great Lakes Region, Lake Erie, All tags... Lake Huron, Lake Michigan, Lake Ontario, Limnology, USGS Science Data Catalog (SDC), Water Quality, algae, algal blooms, aquatic biology, aquatic vegetation, benthos, biota, environment, eutrophication, field sampling, freshwater ecosystems, habitat alteration and disturbance, inlandWaters, invasive species, mollusks, nuisance species, nutrient content (water), optical methods, oxygen content (water), phosphorus, submerged aquatic vegetation, surface water quality, suspended material (water), turbidity, water pH, water sampling, water temperature, Fewer tags