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James E. Cloern

Phytoplankton photosynthesis drives many biogeochemical and ecological processes in lakes, estuaries, and the ocean. For example, dynamic changes in pH, trace metal speciation, and concentrations of dissolved gases (oxygen, carbon dioxide, methane), inorganic nutrients (nitrate, phosphate, silicate), and organic compounds (amino acids, organosulfur compounds) are all closely associated with fluctuations in phytoplankton photosynthesis. Trophic linkages also exist, between the phytoplankton as primary producers and populations of consumer organisms including bacteria, zooplankton, benthic invertebrates, and fish. Our scientific understanding of lakes and estuaries as dynamic ecosystems is therefore dependent upon...
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This Data Release makes available measurements of phytoplankton species composition, abundance and cell size made on samples collected in San Francisco Bay (CA) from January 2014 through December 2018. Whole water phytoplankton samples were collected at least monthly at fixed sampling stations along a 145-km transect where the variability of salinity, temperature, turbidity and nutrient concentrations reflected a broad range of environmental factors that regulate phytoplankton growth and abundance. A map and table of sampling locations are included in this Data Release. Immediately after samples were collected, they were preserved with acid Lugol’s solution. The samples were analyzed by BSA Environmental Services,...
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