A diatom-based transfer function was used to reconstruct water chemistry before European settlement in 55 Minnesota lakes. The lakes span three natural ecoregions, which differ in their history of land use, as well as in surficial geology, climate, and vegetation. Postsettlement trends were compared with water chemistry change reconstructed from two presettlement core sections (circa 1750 and 1800) as a measure of natural variability. Presettlement water quality changes were generally small and nondirectional in all three ecoregions. In contrast, half of the urban lakes showed a statistically significant increase in chloride, whereas 30% of urban and 30% of agricultural region lakes record a statistically significant increase in total [...]