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Annotated bibliography of grazing effects on amphibians and their habitats (ver. 2.0, February 2022)
This database contains literature citations and associated summaries pertaining to livestock grazing effects on amphibians and their habitats, with an emphasis on the Oregon spotted frog (Rana pretiosa) and other listed/sensitive wetland-breeding amphibians in the western United States. This is not meant to be an exhaustive list, nor did we perform a systematic meta-analysis; rather, literature records were included based on topical relevance. *HINT: If you are looking for the database SEARCH TOOL, scroll down to 'Attached Files' and download 'Annotated_bibliography_with_search_tool.accdb.' Open the database file to enter the search form.* This data release supersedes Rowe, J.C., Pearl, C.A., Adams, M.J., and McCreary,...
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Land Use Change,
USGS Science Data Catalog (SDC),
Wildlife Biology,
We used visual surveys to document the presence of all life stages of Cascades frog (Rana cascadae) at historically occupied sites. We surveyed 67 sites 1-2 times between May and August of 2018 and 2019. This effort was a continuation of 2001-2004 surveys conducted at the same site pool. This dataset includes counts of amphibians, reptiles, and fish observed during each site survey, as well as habitat covariates.
Categories: Data;
Tags: Aquatic Biology,
Clackamas County,
Deschutes County,
Douglas County,
Ecology,
This dataset contains information from mark-recapture and egg mass surveys conducted 2015-2018 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort at Jack Creek, Klamath County, Oregon. Data consist of spotted frog counts (handled by surveyors) aggregated by date, location, life stage, and sex, as well as data on environmental conditions at the time each survey. Note that due to updates in access permissions, surveyed area within each site varies over time. Thus, counts are not comparable among year, as surveyed area was not held constant.
Amphibian populations are declining globally at unprecedented rates but statistically rigorous identification of mechanisms is lacking. Identification of reasons underlying large-scale declines is imperative to plan and implement effective conservation efforts. Most research on amphibian population decline has focused on local populations and local factors. However, the ubiquity of declines across species and landscapes suggests that causal factors at a broader scale are also important. Elucidation of the mechanisms driving population change has lagged, mainly because data have been unavailable at continental scales. We propose to address this need by assembling data to answer questions about broad-scale drivers...
Categories: Data,
Project;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Active,
All Working Groups,
Amphibians,
Ecosystems,
Land Resources,
This dataset contains information from surveys conducted 2004-2015 by USGS as part of a long-term amphibian monitoring effort in the Willamette Valley, Oregon. Data consist of site, survey, habitat, and species detection covariates.
The data included here were gathered to determine the effects of cattle grazing on wetland water quality in the Klamath National Wildlife Refuge in Oregon. Surface water samples from sites representing a range of grazing histories were collected between June and October in 2017 and 2018. Samples were analyzed for nutrients (ammonia, nitrate plus nitrite, nitrite, and orthophosphate), total coliforms, E. coli, enterococci, and estrogenicity by U.S. Geological Survey laboratories. Basic water quality parameters such as temperature, pH, turbidity and specific conductance were also collected in the field during each site visit. Quality assurance samples (blanks and replicates) as well as method information is also included...
Categories: Data;
Tags: E. Coli,
Klamath National Wildlife Refuge,
USGS Science Data Catalog (SDC),
biota,
environment,
A key objective of the Trinity River Restoration Program (TRRP) is maintaining and enhancing other wildlife populations through the restoration initiatives. For herpetological species, the foothill yellow-legged frog and western pond turtle have been identified as important species on which to focus monitoring efforts due to their status as California state-listed Species of Concern. As a result, considerable prior effort has focused on understanding the distribution and demography of these species, both on the main Trinity River and on the South Fork Trinity River as a comparison population (potentially representing pre-dam population status). These studies have highlighted differences in life-history traits of...
Comma-separated values (.csv) file containing data related to amphibian sampling across the United States between 2016 and 2021. Data files contain mercury concentrations in amphibian and dragonfly tissues, mercury concentrations in sediment, as well as amphibian morphometrics, and habitat and climate characteristics where the samples were collected.
These data represent capture mark recapture data along with associated disease status for boreal toads (Anaxyrus boreas) from Wyoming and Montana from 2004-2016 and four frog species (Rana draytonii, R. muscosa, R. pretiosa, R. sierrae) from 2001-2016.
This dataset contains information from surveys conducted 2010-2018 by USGS as part of a long-term Oregon spotted frog monitoring effort in the central Oregon range. Data consist of site, survey, habitat, and species detection covariates, as well as inter-site distance measurements.
Forest harvest is one of the primary landscape-scale management actions affecting riparian forests of the Pacific Northwest, U.S, yet the effect of harvest on headwater steam amphibians is largely understudied. Existing information is often limited because of the difficulty separating movement and emigration processes from occupancy and abundance estimates. We designed a before-after control-impact experiment to account for instream movement in the responses of three unique headwater stream amphibians to clearcut logging as part of the Trask River Watershed Experimental Study in the Oregon Coast Range. We captured and marked larval tailed frogs (Ascaphus truei), Coastal giant salamanders (Dicamptodon tenebrosus),...
Amphibians in the US Caribbean, like the well-known coquí frog, are particularly vulnerable to human-caused climate change. Coquí frogs are represented by 17 species across Puerto Rico and US Virgin Islands and include several mountainous and coastal species that are threatened by extreme heat and drying, loss of coastal freshwater marshes through saltwater intrusion, or both. Over the past decade, the Southeast Climate Adaptation Science Center has invested in several scientific investigations to understand how global climate change is likely to affect the local climate of the US Caribbean and how sensitive different coquí species are to changes in local climate and habitat conditions in Puerto Rico. This project...
Categories: Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: 2022,
CASC,
Drought,
Drought,
Drought, Fire and Extreme Weather,
This data set contains mark-recapture information for individuals of Dicamptodon tenebrosus and Ascaphus truei marked for individual recognition. Amphibians represented in this data set were captured in 14 first-order perennial and seasonally intermittent streams in the East Fork of the South Fork of the Trask River in the northern Oregon Coast Range. Individuals are larval and mature aquatic Dicamptodon tenebrosus and larval Ascaphus truei. Of the Ascaphus truei larvae only individuals thought to be in their first summer when first captured are included (these are individuals whose knees had yet to emerge from under the anal flap or fold).
Categories: Data;
Tags: Oregon,
USGS Science Data Catalog (SDC),
amphibians,
biota,
dispersal (organisms),
Since amphibian declines were first proposed as a global phenomenon over a quarter century ago, the conservation community has made little progress in halting or reversing these trends. The early search for a “smoking gun” was replaced with the expectation that declines are caused by multiple drivers. While field observations and experiments have identified factors leading to increased local extinction risk, evidence for effects of these drivers is lacking at large spatial scales. Here, we use observations of 389 time-series of 83 species and complexes from 61 study areas across North America to test the effects of 4 of the major hypothesized drivers of declines. While we find that local amphibian populations are...
Categories: Publication;
Types: Citation
Data are the result of fixed-area, time-constrained searches for terrestrial salamanders within and nearby a wildfire-affected area of the Willamette National Forest, OR. The spatial extent of the study was within one kilometer of the border of the Clark fire that burned an area of 2,009 ha in 2003. Site surveys occurred during March and April, 2005. An important feature of the data is that 100m2 sub-plots (nested within plots) were repeatedly searched for terrestrial salamanders independently up to nine times so that variation in the probability of capture could be estimated and accounted for concurrent with estimates of occupancy probability.
This data set is an amalgamation of twenty-nine original data sets, which represent amphibian surveys in the seven national parks comprising the North Coast and Cascades Network (NCCN) of the National Park Service. The data were collected from 1984-2005, and include the localities of 19 species of amphibians at various life stages, 18 native to the Pacific Northwest and one invasive species.
A key objective of the Trinity River Restoration Program (TRRP) is maintaining and enhancing other wildlife populations through the restoration initiatives. For herpetological species, the foothill yellow-legged frog and western pond turtle have been identified as important species on which to focus monitoring efforts due to their status as California state-listed Species of Concern. As a result, considerable prior effort has focused on understanding the distribution and demography of these species, both on the main Trinity River and on the South Fork Trinity River as a comparison population (potentially representing pre-dam population status). These studies have highlighted differences in life-history traits of...
This dataset contains information from capture-mark-recapture sampling of Oregon spotted frogs (Rana pretiosa) conducted 2016-2019 by USGS as part of a study relating R. pretiosa survival and abundance to wetland inundation in the upper Deschutes River. Data consist of site, survey, habitat, and species detection covariates, as well as 10 years of hydrological and drought metrics used to establish relationships between river flow and area of inundation at survey sites. Remotely sensed and model predicted area wet estimates for the sites are also given.
We used radio-telemetry to study late-season movement and habitat use by Oregon spotted frogs (Rana pretiosa) at Crane Prairie Reservoir in Oregon. This dataset includes individual frog location data and habitat use during each tracking event that occurred roughly weekly between September and late November of 2018.
We used radio-telemetry to study late-season movement and habitat use by Oregon spotted frogs (Rana pretiosa) at Klamath Marsh National Wildlife Refuge in Oregon. This data release includes frog location and habitat use data, as well as visualizations of telemetry data. Tracking events occurred roughly weekly between August and December of 2017.
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Klamath County,
Oregon,
USGS Science Data Catalog (SDC),
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