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Data on 17 metrics of shale gas development in the Pennsylvania portion of the Upper Susquehanna River basin that was collated from a variety of sources and summarized at the upstream catchment scale. Data were also standardized by upstream area and transformed into rank scores based on metric distribution and then summarized into a Disturbance Intensity Index (DII). See Maloney et al. 2018 for detailed descriptions of each data sets and limitations of data. (Maloney, K. O., J. A. Young, S. P. Faulkner, A. Hailegiorgis, E. T. Slonecker, and L. E. Milheim. 2018. A detailed risk assessment of shale gas development on headwater streams in the Pennsylvania portion of the Upper Susquehanna River Basin, U.S.A. Science...
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This dataset contains sample information about the origin of the butterflies sequenced, and their corresponding SNP genotype data. These data were used to examine patterns of genomic structure of the Karner blue butterfly from throughout its range. The raw sequence data are archived in the GenBank Bioproject PRJNA995790 at: https://www.ncbi.nlm.nih.gov/bioproject/
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This data set was collected as part of a structured decision-making workshop designed to identify sources of uncertainty and articulate alternative hypotheses about prescribed fire in high marshes of the Gulf of Mexico. Workshop participants independently scored alternative hypotheses based on a standard rubric using an online system. Following the workshop, we used the scores to compute QVoI for each participant. We used QVoI to prioritize the sources of uncertainty based on their magnitude of uncertainty, relevance for decision making, and reducibility.
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In order to allow for a comparison across years we visually digitized landcover of Poplar Island from a single image per year at a 1:1000 spatial extent with a minimum mapping unit of 300 square meters (no minimum dimensions aside from area). Images used to assign landcover were provided by the U.S. Army Corps of Engineers and were captured between July and October of their respective years. All images were 1 foot resolution.
This is an antiquated version of the North American Breeding Bird Survey (BBS) dataset that has been superseded by a more recent release. Unless visitors have a specific need for these archived data, they should return to the Main BBS Dataset Page and choose the most recent data release, as that one will include all BBS data released to date. The 1966-2021 North American Breeding Bird Survey (BBS) dataset contains avian point count data for more than 700 North American bird taxa (species, races, and unidentified species groupings). These data are collected annually during the breeding season, primarily in June, along thousands of randomly established roadside survey routes in the United States and Canada. Routes...
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This data set is comprised of 3 files of information collected on amphibians and vernal pool habitats at Canaan Valley National Wildlife Refuge from 2004 - 2016.
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These data are a compilation of fishway structures collected by the Atlantic States Marine Fisheries Commission state representatives at the request of the U.S. Geological Survey. The variables included within this dataset range from locality information and structure metadata (eg. latitude/longitude and year of construction) to metrics specifically about the fishway structure (eg. fishway width). The dataset ranges in dates of construction from 1882 to 2020 and includes fishways from all states on the eastern coast of the United States. Requests were sent to the Atlantic States Marine Fisheries Commission state representatives to collect fishway data from the areas within their responsibility. The state representatives...
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Here we provide data used to report on changes in tidal marsh elevation in relation to our network of 20 fixed benchmarks located across a geographically broad network of coastal elevation monitoring stations with standard monitoring protocols. This dataset includes Surface Elevation Table (SET) measurements taken from 10 sites along the US Atlantic coast, ranging from Virginia to Maine. Each site includes 2 SETs where repeat measurements of wetland surface elevation were made from 2005-2019.
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This data release links benthic macroinvertebrate sites to both the NHDPlus Version 2 and NHDPlus High Resolution Region 02 networks, hereafter referred to as V2 and HR, using the hydrolink methodology. Linked benthic macroinvertebrate sites are those included in the Chesapeake Bay Basin-wide Index of Biotic Integrity (Chessie BIBI) developed by the Interstate Commission on the Potomac River Basin (ICPRB) and available from the Chesapeake Bay Program (https://datahub.chesapeakebay.net/LivingResources). The data set contains a unique sample identifier created by ICPRB, survey program, coordinates of sample, linked V2 COMID and HR Permanent Identifier, and information regarding uncertainty in the attribution. We strongly...
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These data support a paired USGS publication and document the use of retention ponds on commercial poultry farms by wild waterfowl.
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This study examined effects of the brominated flame retardant hexabromocyclododecane (HBCD) on the avian endocrine system. Japanese quail (Coturnix japonica) were exposed to multiple doses of HBCD over multiple generations through feed and by maternal deposition into the egg. Liver transcriptomes were examined to identify genes and pathways directly affected by HBCD to better understand the mechanisms of action in birds. RNA was extracted from liver of adults and embryos and analyzed (1x50 bp) on an Illumina HiSeq 2000. NCBI Biosample accessions and the raw counts that were input into the differential expression analysis are provided in this dataset. The raw sequence data are available at the NCBI Sequence Read...
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Nest number, description of nest structure and location, longitude, latitude, dates of observations, presence of adults, eggs, nestlings, outcome of reproductive effort, number of young fledged, and osprey nest platforms occupied by Canada geese.
The 1966-2022 North American Breeding Bird Survey (BBS) dataset contains avian point count data for more than 700 North American bird taxa (species, races, and unidentified species groupings). These data are collected annually during the breeding season, primarily in June, along thousands of randomly established roadside survey routes in the United States and Canada. Routes are roughly 24.5 miles (39.2 km) long with counting locations placed at approximately half-mile (800-m) intervals, for a total of 50 stops. At each stop, a citizen scientist highly skilled in avian identification conducts a 3-minute point count, recording all birds seen within a quarter-mile (400-m) radius and all birds heard. Surveys begin 30...
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A seminal question in ecotoxicology is the extent to which contaminant exposure evokes prolonged effects on physiological function and fitness. A series of studies were undertaken with American kestrels ingesting environmentally realistic concentrations of the second-generation anticoagulant rodenticide (SGAR) brodifacoum (BROD). Kestrels fed BROD at 0.3, 1.0 or 3.0 µg/g diet wet wt for 7 d exhibited dose-dependent hemorrhage, histopathological lesions and coagulopathy (prolonged prothrombin and Russell’s viper venom times). Following termination of a 7 d exposure to 0.5 µg BROD/g diet, prolonged blood clotting time returned to baseline values within a week, but BROD residues in liver and kidney (terminal half-life...
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The information provided in the Contaminant Exposure and Effects-Terrestrial Vertebrates (CEE-TV) Database profiles available geo-referenced information on contaminant exposure and effects in terrestrial vertebrates along the U. S. Atlantic, Gulf, and Pacific coasts (including Hawaii and Alaska) and the Great Lakes.
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The rusty-patched bumble bee (Bombus affinis) is a listed species under the Endangered Species Act of the United States. While understood to be a highly generalist forager, little is known on the role that limited floral resources or shifting floral community composition could have played in B. affinis decline. Determining which floral species provide suitable B. affinis forage could assist conservation efforts where B. affinis persists, identify floral species for restoration efforts, or highlight regions to search for cryptic populations.
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Data are included for field surveys conducted for freshwater mussels within the Pine Creek watershed in the Mid-Atlantic region of the United States. Timed search (qualitative) surveys were conducted in ~200 meter sections of river between 1995 and 2009; The number of mussels of each species and associated search time were recorded for each survey section to determine a catch per unit effort (CPUE; number of individuals found per person hour).
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These data, which support a paired USGS publication, document the movement and infection status of mallards captured, marked, and tested at a wintering site in Tennessee. Data document differences in movement ecology between mallards infected and not infected with HPAI H5N1.
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This dataset includes all North American Breeding Bird Survey data collected in Mexico between 2008-2018. These data were used as the basis for all analyses discussed in an associated publication: The North American Breeding Bird Survey in Mexico, 2008-2018 — A Status Report; https:doi.org/10.3133/cir1479. The records include avian point count data for all reported taxa (species, races, and unidentified species groupings). In addition to avian count data, this dataset also contains survey date, survey start and end times, start and end weather conditions, a unique observer identification number, route identification information, and route location information including country, state, and BCR, as well as geographic...
This data release is a summarization within the USGS Spatial Hydro-Ecological Decision System (SHEDS) framework of the Oregon State University PRISM Climate Group 30-year normal 800 meter resolution monthly, minimum and maximum temperature data and monthly precipitation data between 1991 and 2020. The output is a table consisting of the summarized values of these continuous variables for each local SHEDS catchment within the SHEDS Hydro-Region 2 along with a table of these variables individually processed through an upstream accumulation method for each catchment in SHEDS Region 2. This upstream accumulation method takes the local and upstream catchment values for a particular catchment, individually weighs them...
map background search result map search result map Shale gas data used in development of the Disturbance Intensity Index for the Pennsylvania portion of the Upper Susquehanna River basin in Maloney et al. 2018 Brodifacoum toxicity in American kestrels (Falco sparverius) with evidence of increased hazard upon subsequent anticoagulant rodenticide exposure Poplar Island Digitizing Pine Creek freshwater mussel qualitative survey data 1995 through 2009 Rusty Patched Bumble Bee Pollen Metagenome Qualitative value of information for the effects of prescribed fire in Gulf of Mexico marshes: Expert judgment scores from a 2020 adaptive management workshop Long-term effects of timber harvest on vernal pool availability and occupancy of two obligate amphibians Fishway Structure Data in the Eastern United States The Contaminant Exposure and Effects-Terrestrial Vertebrates database (CEE-TV) Surface Elevation Tablet Measurements from 10 USGS Sites Along the US Atlantic Coast (2005-2020) Data showing similar movement ecology between mallards infected and not infected with highly pathogenic avian influenza H5N1 Data describing the use of retention ponds on commercial poultry facilities on Delmarva by wild waterfowl Attribution of benthic macroinvertebrate sampling data to NHDPlus V2 and NHDPlus HR catchments within the Chesapeake Bay Watershed SNP data for Karner blue butterfly samples from across the species range Transcriptomic Responses to Hexabromocyclododecane in Japanese Quail Osprey Reproduction in vicinity of the Choptank River 2024 Transcriptomic Responses to Hexabromocyclododecane in Japanese Quail Poplar Island Digitizing Brodifacoum toxicity in American kestrels (Falco sparverius) with evidence of increased hazard upon subsequent anticoagulant rodenticide exposure Long-term effects of timber harvest on vernal pool availability and occupancy of two obligate amphibians Osprey Reproduction in vicinity of the Choptank River 2024 Data describing the use of retention ponds on commercial poultry facilities on Delmarva by wild waterfowl Pine Creek freshwater mussel qualitative survey data 1995 through 2009 Shale gas data used in development of the Disturbance Intensity Index for the Pennsylvania portion of the Upper Susquehanna River basin in Maloney et al. 2018 Attribution of benthic macroinvertebrate sampling data to NHDPlus V2 and NHDPlus HR catchments within the Chesapeake Bay Watershed Qualitative value of information for the effects of prescribed fire in Gulf of Mexico marshes: Expert judgment scores from a 2020 adaptive management workshop Surface Elevation Tablet Measurements from 10 USGS Sites Along the US Atlantic Coast (2005-2020) Rusty Patched Bumble Bee Pollen Metagenome Fishway Structure Data in the Eastern United States Data showing similar movement ecology between mallards infected and not infected with highly pathogenic avian influenza H5N1 SNP data for Karner blue butterfly samples from across the species range The Contaminant Exposure and Effects-Terrestrial Vertebrates database (CEE-TV)