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A compilation of previously published results exploring the pathogenesis of avian influenza viruses in wild avian species in North America.
Categories: Data;
Tags: North America,
USGS Science Data Catalog (SDC),
avian influenza,
biota,
none
The dataset contains qualitative detection and quantitative results of Esox Lucius DNA in environmental (e)DNA water samples collected from Miller Creek, Alaska and analyzed with quantitative PCR.
Categories: Data;
Tags: Alaska,
Aquatic Biology,
USGS Science Data Catalog (SDC),
biota,
environmental DNA
This release includes data used to evaluate the structure and function of the Ross Lake and Diablo Lake food webs. This includes data on zooplankton density and production (zooplankton_density.csv and daphnia_region_production_biomass.csv), lake volume estimates used to expand zooplankton density and production data (lake_volume_estimates.csv), fish sampling (FishSampleEvents.csv), fish biological information including diets, age, and stable isotope analysis (FishFullData_formatted.csv, FishPreyLength.csv), scale back-calculations (salmonid_back_calc.csv, rss_back_calc.csv), fish energy density (calorimetry_processed.csv), stable isotope data for invertebrate end members (si_inverts.csv), and hydroacoustic sampling...
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Limnology,
Ross Lake National Recreation Area,
USGS Science Data Catalog (SDC),
The decline of the iconic monarch butterfly in North America has motivated research on the impacts of land use and land cover (LULC) change and climate variability on monarch habitat and population dynamics. We investigated spring and fall trends in LULC, milkweed and nectar resources over a 20-year period, and ~30 years of climate variables in Mexico and Texas, a key region supporting spring and fall migration during monarchs annual life cycle. We estimated a 2.9% decline in milkweed in Texas, but little to no change in Mexico. Fall and spring nectar resources declined <1% in both countries. Vegetation greenness increased in both the fall and spring in Mexico while the other climate variables, for both countries,...
Categories: Data,
Data Release - In Progress;
Tags: Mexico,
United States,
climate change,
land cover change,
migratory species,
These orthophotos and digital surface model (DSM) were derived from low-altitude (approximately 92-m above ground surface) images collected from Unmanned Aerial System (UAS) flights over edge-of-field sites that are part of U.S. Geological Survey (USGS) Great Lakes Restoration Initiative (GLRI) monitoring. The objective of this UAS photogrammetry data collection was to provide information on the tile-drain network in individual fields with the goal of understanding already observed patterns in runoff amount and water quality from these sites. A 3DR Solo quadcopter served as the flight vehicle, flights were pre-planned using Mission Planner, and flights were flown using Tower. Geospatial data were originally in WGS84...
Categories: Data;
Tags: Brown County,
Great Lakes,
USGS Science Data Catalog (SDC),
Water Resources,
Wisconsin,
Comma Separated Value (CSV) file containing data related to total and methyl mercury concentrations in biota from the Willamette Basin in Oregon; specifically, Cottage Grove Reservoir, waters upstream of the reservoir, and additional reservoirs within the Willamette Basin.
Data from a laboratory study undertaken at the U.S. Geological Survey to investigate solid/water partitioning of per- and polyfluoroalkyl substances (PFAS) in New Hampshire soils and biosolids are presented here. Soils and biosolids used for the experiments were collected using PFAS-free sampling equipment, air dried, gently homogenized, and sieved (soils only). Soil samples were collected from locations with known PFAS contamination (n = 5) and nearby sites with similar soil characteristics but low expected PFAS concentrations (n = 4). Finished biosolids were collected directly from facilities at the final stage of processing and before distribution. Air-dried soils and biosolids were then used for a series of...
Categories: Data;
Tags: New Hampshire,
USGS Science Data Catalog (SDC),
contaminant transport,
environment
We expanded developed methodology to incorporate habitat selection and survival during reproductive life stages and specific seasons with updated greater sage-grouse location and known fate datasets. We included brood-rearing areas that are understood to be threatened and important for population persistence. We combined predictive habitat map surfaces for each life stage and season with updated information on current occupancy patterns to classify habitat based on its suitability and probability of occupancy. We performed additional steps to delineate example habitat management areas, specifically: (1) incorporated corridors connecting key nesting and brood-rearing habitat; (2) corrected outputs for pre-wildfire...
The contents of this data release represent the results of the noble gas composition analysis and are presented in support of the planned publication Gao et al., 2023, titled Lead and noble gas isotopic constraints on the origin of Te-bearing adularia-sericite epithermal Au-Ag deposits in a calc-alkaline magmatic arc. Tellurium (Te)-bearing adularia-sericite epithermal Au-Ag deposits are widely distributed in calc-alkaline magmatic arcs and are an important current and future source of precious and critical metals. However, the source of ore-forming fluids in these deposits remain unclear due to the lack of isotopic evidence on Au-, Ag-, and Te-bearing minerals. To advance understanding of the source of Te and precious...
Categories: Data;
Tags: China,
Dong’an,
Geology, Geophysics, and Geochemistry Science Center,
Mineral Resources Program,
Sandaowanzi,
This archive documents a Soil Water Balance (SWB) model of the The White River Basin, Washington and immediate surrounding environs. The SWB model is used to estimate surface processes of a water budget including precipitation, interception, evapotranspiration, surface runoff, etc. for the upper White River area from January 1999 - December 2020.
The Louisiana State Legislature created the Coastal Wetlands Planning, Protection and Restoration Act (CWPPRA) in order to conserve, restore, create and enhance Louisiana's coastal wetlands. The wetland restoration plans developed pursuant to these acts specifically require an evaluation of the effectiveness of each coastal wetlands restoration project in achieving long-term solutions to arresting coastal wetlands loss. This data set includes mosaicked aerial photographs for the Delta Management at Fort St. Philip (BS-11) project for 2021. This data is used as a basemap land-water classification. It also serves as a visual tool for project managers to help them identify any obvious problems or land loss within their...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Downloadable,
Map Service;
Tags: BS-11,
CWPPRA,
Geography,
Gulf of Mexico,
Land Use Change,
A three-dimensional groundwater flow model, MODFLOW 6, was developed to provide a better understanding of the hydrogeology of the Harney Basin, southeastern Oregon. The model was used to investigate the historical groundwater-level decline and storage loss associated with anthropogenic groundwater demands. The model was calibrated to 1930 through 2018 conditions. This USGS data release contains all of the input and output files for the simulation described in the associated model documentation report (https://doi.org/10.3133/sir20241518)
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Burns,
Groundwater Model,
Harney Basin,
Harney County,
Harney Lake,
This software archive is superseded by Hydrologic Toolbox v1.1.0, available at the following citation: Barlow, P.M., McHugh, A.R., Kiang, J.E., Zhai, T., Hummel, P., Duda, P., and Hinz, S., 2024, U.S. Geological Survey Hydrologic Toolbox version 1.1.0 software archive: U.S. Geological Survey software release, https://doi.org/10.5066/P13VDNAK. The U.S. Geological Survey Hydrologic Toolbox is a Windows-based desktop software program that provides a graphical and mapping interface for analysis of hydrologic time-series data with a set of widely used and standardized computational methods. The software combines the analytical and statistical functionality provided in the U.S. Geological Survey (USGS) Groundwater (Barlow...
This imagery dataset consists of 3-meter resolution, lidar-derived imagery of the Lewisburg 30 x 60 minute quadrangle in Virginia and West Virginia. The source data used to construct this imagery consists of 1-meter resolution lidar-derived digital elevation models (DEMs). The lidar source data were compiled from different acquisitions published between 2020 and 2021. The data were processed using geographic information systems (GIS) software. The data is projected in WGS 1984 Web Mercator. This representation illustrates the terrain as a hillshade with contrast adjusted to highlight local relief according to a topographic position index (TPI) calculation.
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Raster;
Tags: Geography,
Geomorphology,
Land Use Change,
Lidar,
Mineral Resources,
Gap Analysis Project (GAP) habitat maps are predictions of the spatial distribution of suitable environmental and land cover conditions within the United States for individual species. Mapped areas represent places where the environment is suitable for the species to occur (i.e. suitable to support one or more life history requirements for breeding, resting, or foraging), while areas not included in the map are those predicted to be unsuitable for the species. While the actual distributions of many species are likely to be habitat limited, suitable habitat will not always be occupied because of population dynamics and species interactions. Furthermore, these maps correspond to midscale characterizations of landscapes,...
Categories: Data,
Map;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Biodiversity and Ecosystems Theme,
NGDA,
National Geospatial Data Asset,
USGS Science Data Catalog (SDC),
United States,
Relative-gravity surveys were carried out using a ZLS Burris relative-gravity meter. The effect of solid Earth tides and ocean loading were removed from the data. Instrument drift was removed by evaluating gravity change during repeated measurements at one or more base stations. Absolute-gravity surveys were carried out using a Micro-g LaCoste, Inc. A-10 absolute-gravity meter. Vertical gradients between the different measuring heights of the absolute- and relative-gravity meters were measured using a relative-gravity meter and fully-adjustable tripod, and used to correlate the measurements between the two instruments. Relative-gravity differences and absolute-gravity data were combined using a least-squares network...
This data release includes cross section survey data collected during site visits to USGS gaging stations located throughout the Willamette and Delaware River Basins and multispectral images of these locations acquired as close in time as possible to the date of each site visit. In addition, MATLAB source code developed for the Bathymetric Mapping using Gage Records and Image Databases (BaMGRID) framework is also provided. The site visit data were obtained from the Aquarius Time Series database, part of the USGS National Water Information System (NWIS), using the Publish Application Programming Interface (API). More specifically, a custom MATLAB function was used to query the FieldVisitDataByLocationServiceRequest...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Bathymetry,
Cross sections,
Delaware River Basin,
Depth,
This study applied historical aerial imagery and satellite imagery to create digital surface models (DSMs) of the Helmand River Valley situated in southwestern Afghanistan. The historical imagery, collected in 1952 by Fairchild Aerial Surveys Incorporated (FAS), at 1:40,000 scale, represents the earliest known aerial photographic archive of the Helmand Valley landscape. Structure-from-motion (SfM) multi-view stereo (MVS) photogrammetric techniques were used together with ground control points collected from high resolution satellite imagery to create a 5m digital elevation model (DEM) and 2m orthoimage. The historical DEM was evaluated for accuracy against a 2006 5m DEM using SPOT-5 HRG satellite imagery which was...
Multi sequence file (.msf) file used to construct a 28S rRNA phylogenetic tree of species of Euryhelmis and other heterophyid trematodes. Sequences were generated from metacercariae samples at U.S. Geological Survey National Wildlife Health Center (NWHC) and compared for base pair similarities with publicly available sequences from GenBank using BLAST (https://blast.ncbi.nlm.nih.gov/Blast.cgi). Selection of GenBank sequences to include in the .msf file was based on the number of base pair similarities (94% or higher identity to this study’s sequences), 98–100% coverage AND stage of parasite from which the sequence was generated. An excel file listing all parasites and DNA from NWHC vouchered with the University...
Categories: Data;
Tags: Bear Creek Redwoods Preserve,
California Giant Salamander,
Euryhelmis sp,
Santa Clara,
USGS Science Data Catalog (SDC),
Provided are data containing condition assessments on individual giant sequoia (Sequoiadendron giganteum; SEGI) stems and post-fire regeneration counts within Board Camp, Suwanee, New Oriole Lake, Homer’s Nose, and a subset of Redwood Mountain and Dillonwood groves of Sequoia and Kings Canyon national parks, respectively. Stem data contain condition-related attributes (e.g., spatial location, diameter breast height, status - live or dead, percent canopy that is live, scorched or torched). Regeneration plots are located using a spatially-balanced sampling design (Generalized Random Tessellation Stratified - 'GRTS'). Each regeneration plot is a fixed radius circle (11.35 meters or 17.84 meters) and contain count data...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Ecology,
Forestry,
Sequoia National Park,
USGS Science Data Catalog (SDC),
biota,
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