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This data release is provided in support of Arismendi, I., Dunham, J.B., Heck, M.P., Schultz, L.D., Hockman-Wert, D.P., 2017, A statistical method to predict flow permanence in dryland streams from time series of stream temperature: Water, v. 9, no. 12, p. 946, https://doi.org/10.3390/w9120946. This code release contains all of the source code from the "Hidden Markov Model" sections of the associated manuscript. The source code was written using the R programming language (www.r-project.org, version 3.3.1). Running the code requires knowlege of the R programming language. The code snippet requires the folder location containing the data, and the site being processed, to be updated. The code requires certain R packages,...
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This data set contains links that are important to each species' habitat network. Those important links are scored based on the percent currently under protection status, projected change in climate suitability by the middle of the 21st century, and projected change in percent urbanized by the middle of the 21st century. Important links were identified from all links in the networks of each species based on their Integral Index of Connectivity (dIIC). Any links with dIIC scores > 0.9 or which connected to nodes with dIIC > 0.9 were retained here as "important" links.
Abstract (from http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0173844): Urban habitats are characterized by impervious surfaces, which increase temperatures and reduce water availability to plants. The effects of these conditions on herbivorous insects are not well understood, but may provide insight into future conditions. Three primary hypotheses have been proposed to explain why multiple herbivorous arthropods are more abundant and damaging in cities, and support has been found for each. First, less complex vegetation may reduce biological control of pests. Second, plant stress can increase plant quality for pests. And third, urban warming can directly increase pest fitness and abundance. These...
These data represent the extent of urbanization (for the year indicated) predicted by the model SLEUTH, developed by Dr. Keith C. Clarke, at the University of California, Santa Barbara, Department of Geography and modified by David I. Donato of the United States Geological Survey (USGS) Eastern Geographic Science Center (EGSC). Further model modification and implementation was performed at the Biodiversity and Spatial Information Center at North Carolina State University
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Winter climate change has the potential to have a large impact on coastal wetlands in the southeastern U.S. Warmer winter temperatures and reductions in the intensity of freeze events would likely lead to mangrove forest range expansion and salt marsh displacement in parts of the U.S. Gulf of Mexico and Atlantic coast. The objective of this research was to better understand some of the ecological implications of mangrove forest migration and salt marsh displacement. The potential ecological effects of mangrove migration are diverse ranging from important biotic impacts (e.g., coastal fisheries, land bird migration; colonial nesting wading birds) to ecosystem stability (e.g., response to sea level rise and drought;...
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Winter climate change has the potential to have a large impact on coastal wetlands in the southeastern U.S. Warmer winter temperatures and reductions in the intensity of freeze events would likely lead to mangrove forest range expansion and salt marsh displacement in parts of the U.S. Gulf of Mexico and Atlantic coast. The objective of this research was to better understand some of the ecological implications of mangrove forest migration and salt marsh displacement. The potential ecological effects of mangrove migration are diverse ranging from important biotic impacts (e.g., coastal fisheries, land bird migration; colonial nesting wading birds) to ecosystem stability (e.g., response to sea level rise and drought;...
Efforts to conserve stream and river biota could benefit from tools that allow managers to evaluate landscape-scale changes in species distributions in response to water management decisions. We present a framework and methods for integrating hydrology, geographic context and metapopulation processes to simulate effects of changes in streamflow on fish occupancy dynamics across a landscape of interconnected stream segments. We illustrate this approach using a 482 km2 catchment in the southeastern US supporting 50 or more stream fish species. A spatially distributed, deterministic and physically based hydrologic model is used to simulate daily streamflow for sub-basins composing the catchment. We use geographic data...
Abstract (from http://onlinelibrary.wiley.com/doi/10.1111/1752-1688.12304/abstract): The hydrologic response to statistically downscaled general circulation model simulations of daily surface climate and land cover through 2099 was assessed for the Apalachicola-Chattahoochee-Flint River Basin located in the southeastern United States. Projections of climate, urbanization, vegetation, and surface-depression storage capacity were used as inputs to the Precipitation-Runoff Modeling System to simulate projected impacts on hydrologic response. Surface runoff substantially increased when land cover change was applied. However, once the surface depression storage was added to mitigate the land cover change and increases...
Population changes and shifts in geographic range boundaries induced by climate change have been documented for many insect species. On the basis of such studies, ecological forecasting models predict that, in the absence of dispersal and resource barriers, many species will exhibit large shifts in abundance and geographic range in response to warming. However, species are composed of individual populations, which may be subject to different selection pressures and therefore may be differentially responsive to environmental change. Asystematic responses across populations and species to warming will alter ecological communities differently across space. Common garden experiments can provide a more mechanistic understanding...
Abstract (from http://www.esajournals.org/doi/abs/10.1890/11-2296.1): Physiological tolerance of environmental conditions can influence species-level responses to climate change. Here, we used species-specific thermal tolerances to predict the community responses of ant species to experimental forest-floor warming at the northern and southern boundaries of temperate hardwood forests in eastern North America. We then compared the predictive ability of thermal tolerance vs. correlative species distribution models (SDMs) which are popular forecasting tools for modeling the effects of climate change. Thermal tolerances predicted the responses of 19 ant species to experimental climate warming at the southern site,...
We developed a spatially explicit model that simulated future southern pine beetle (Dendroctonus frontalis, SPB) dynamics and pine forest management for a real landscape over 60 years to inform regional forest management. The SPB has a considerable effect on forest dynamics in the Southeastern United States, especially in loblolly pine (Pinus taeda) stands that are managed for timber production. Regional outbreaks of SPB occur in bursts resulting in elimination of entire stands and major economic loss. These outbreaks are often interspersed with decades of inactivity, making long-term modeling of SPB dynamics challenging. Forest management techniques, including thinning, have proven effective and are often recommended...
1) Raw parcel-level habitat data for the South Carolina Lowcountry surrounding Cape Romain NWR and Francis Marion NF, from current current conditions and for three projected sea-level rise futures based on SLAMM model outputs, NLCD land cover and the projected distribution of sea levels for 2050. 2) a table of parcel identification numbers (without georeference) with parcel size (Ha) and sub-group identity. 3) Optimization-model derived reserve design portfolios that define the Pareto-optimal frontier for each sub-group and for four budget scenarios along axes of reserve design benefits and risk.
This capacity-building activity supported three tribal college and university (TCU) mini-­grants to initiate student phenological and meteorological observation projects in support of climate change research, to document impacts of climate change and development of indigenous geography curriculum. Students made observations of culturally and/or traditionally significant plants to generate data sets for use in climate change impact assessment of these plants and plant communities. The activity contributed to the larger national efforts of the Smithsonian National Museum of the American Indian’s “Indigenous Geography” curricula, by engaging with students at tribal colleges to explore the linkage between the “seasonality”...
USGS researchers from the North Central CASC and the Northern Prairie Wildlife Research Center recently collaborated with the National Park Service Climate Change Response Program to develop a new product that communicates the results from a collaborative effort—involving resource managers, subject-matter experts, and a larger climate change adaptation team—to identify potential climate impacts and management responses in Badlands National Park. The researchers used scenario planning and ecological simulation modeling to anticipate management challenges and identify options for Badlands National Park and adjacent federal and tribal lands in the coming decades (through 2050). The ecological simulation models help...
There is growing evidence that the rate of warming is amplified with elevation, such that high-mountain environments experience more rapid changes in temperature than environments at lower elevations. Elevation-dependent warming (EDW) can accelerate the rate of change in mountain ecosystems, cryospheric systems, hydrological regimes and biodiversity. Here we review important mechanisms that contribute towards EDW: snow albedo and surface-based feedbacks; water vapour changes and latent heat release; surface water vapour and radiative flux changes; surface heat loss and temperature change; and aerosols. All lead to enhanced warming with elevation (or at a critical elevation), and it is believed that combinations...
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Locating meadow study sitesMeadow centers as recorded in the ‘Copy of sitecords_areaelev from Caruthers thesis.xls’ file delivered by Debinski in November 2012 were matched to polygons as recorded in files ‘teton97map_area.shp’ and ‘gallatin97map_area.shp’ both also delivered by Debinski in November 2012.In cases where the meadow center did not fall within a meadow polygon, if there was a meadow polygon of the same meadow TYPE nearby (judgment was used here), the meadow center was matched with the meadow polygon of same meadow TYPE. In total, 29 of 30 Gallatin meadow sites and 21 of 25 Teton meadow sites were positively located.Identifying meadow pixels for analysisThe native MODIS 250-meter grid was reprojected...
map background search result map search result map Hydrological Analysis of Greater Yellowstone Ecosystem Montane Meadow Condition using MODIS data New soil data collection: subplot-level shear strength New porewater data collection: subplot-level physicochemical Important links for Black bear, Rafinesque's big-eared bat, and timber rattlesnake Hydrological Analysis of Greater Yellowstone Ecosystem Montane Meadow Condition using MODIS data New soil data collection: subplot-level shear strength New porewater data collection: subplot-level physicochemical Important links for Black bear, Rafinesque's big-eared bat, and timber rattlesnake