Filters: Tags: Amphibians (X) > partyWithName: U.S. Geological Survey - ScienceBase (X)
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These raster data represent the results of a case study in Arizona on how vertebrate richness metrics can be used with existing state and federal guidance in wind and solar energy facility siting. Each of the four geodatabases (see Cross References) contain eight native terrestrial wildlife group models in Arizona: 1) all vertebrates, 2) amphibians, 3) reptiles, 4) birds, 5) mammals, 6) bats, 7) raptors and 8) long-distant migratory birds. An XML workbook is included that lists all terrestrial native vertebrate species in Arizona which cross-walks these species to the name of the National Gap Analysis Project species distribution model.
We conducted a radio telemetry study of adult western spadefoots (Spea hammondii) at 2 sites in southern California to characterize their survival, behavior, and movements from breeding through aestivation to inform conservation and management for the species. These data support the following publication: Halstead, B.J., Baumberger, K.L., Backlin, A.R., Kleeman, P.M., Wong, M.N., Gallegos, E.A., Rose, J.P., and Fisher, R.N., 2021. Conservation implications of spatiotemporal variation in the terrestrial ecology of an ephemeral pool-breeding amphibian. The Journal of Wildlife Management.
Categories: Data;
Tags: California,
Orange County,
Southern California,
Spea hammondii,
USGS Science Data Catalog (SDC),
These data include egg mass counts and adult capture-mark-recapture histories for Foothill Yellow-legged frogs (Rana boylii) at two streams in northern California. Data were collected from the South Fork Eel River and its tributary, Fox Creek, from 1993-2019. Data from Hurdygurdy Creek were collected from 2002-2008.
The data contained in child items of this page were developed to support the Species Status Assessments conducted by the U.S. Fish & Wildlife Service and conservation planning for State, Federal, and non-government researchers, managers, landowners, and other partners for five focal herpetofauna species: gopher tortoise (Gopherus polyphemus), southern hognose snake (Heterodon simus), Florida pine snake (Pituophis melanoleucus mugitus), gopher frog (Lithobates capito), and striped newt (Notophthalmus perstriatus). These data were developed by the USGS Cooperative Fish & Wildlife Research Unit at the University of Georgia in collaboration with other partners. The three child items contain the following data: (1)...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Alabama (AL),
Florida (FL),
Florida Pine Snake,
Georgia (GA),
Gopher Frog,
Annotated bibliography of grazing effects on amphibians and their habitats (ver. 2.0, February 2022)
This database contains literature citations and associated summaries pertaining to livestock grazing effects on amphibians and their habitats, with an emphasis on the Oregon spotted frog (Rana pretiosa) and other listed/sensitive wetland-breeding amphibians in the western United States. This is not meant to be an exhaustive list, nor did we perform a systematic meta-analysis; rather, literature records were included based on topical relevance. *HINT: If you are looking for the database SEARCH TOOL, scroll down to 'Attached Files' and download 'Annotated_bibliography_with_search_tool.accdb.' Open the database file to enter the search form.* This data release supersedes Rowe, J.C., Pearl, C.A., Adams, M.J., and McCreary,...
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Land Use Change,
USGS Science Data Catalog (SDC),
Wildlife Biology,
The data presented include concentrations of 10 metals in sediments and composite larval amphibian tissues from 20 wetlands across the United States. Sixteen of the wetlands were sampled in 2019 and four were sampled in 2015-2016. Where possible both larval anurans (frogs and toads) and salamanders were collected from each wetland. The data also include information on metal concentrations in amphibian tissues after the gut contents were removed to understand metal bioaccumulation potential and the molar ratio of selenium to mercury in each tissue composite sample. This data release supports the following publication: Smalling, K.L., Oja, E.B., Cleveland, D.M., Davenport, J.M., Eagles-Smith, C., Grant, E.H.C., Kleeman,...
The data presented include concentrations of 122 organic, 23 inorganic constituents, and estrogenicity in water collected from 13 off-stream non-point source sites (natural and created wetlands) and eight on-stream point source sites (streams and impoundments) in the New Jersey Pinelands, 2017-2020. Native and non-native fish health data collected from the on-stream sites as well as native frog data collected from the off-stream sites are also included. For the on-stream point-source component, we analyzed water chemistry, hormone activity, and collected native and non-native fish from two locations upstream and one downstream from two municipal wastewater treatment plants (six total sites) and from two minimally...
The data support a study that describes the development and validation of a primer and probe based quantitative PCR (qPCR) assay for use with environmental DNA to detect Northwest salamander (Ambystoma gracile), a species endemic to the temperate Pacific coastal region of North America. The metadata includes qPCR quantification cycle (Cq) values from testing the A. gracile assay on DNA extracted from tissue samples derived from several A. gracile and closely related species and Cq values from testing the assay on environmental DNA (eDNA ) samples collected from two lakes, one containing A. gracile and one without the species.
Categories: Data;
Tags: Aquatic Biology,
Genetics,
Pacific Northwest,
USGS Science Data Catalog (SDC),
amphibians,
This data set is comprised of 3 files of information collected on amphibians and vernal pool habitats at Canaan Valley National Wildlife Refuge from 2004 - 2016.
Categories: Data;
Tags: Ecology,
Tucker,
USGS Science Data Catalog (SDC),
West Virginia,
Wildlife Biology,
This U.S. Geological Survey data release includes tabular data collected to characterize the habitat and movement of Dixie Valley toads. Data were collected in Dixie Valley, Nevada, in autumn 2018 and spring 2019. These data support the following publication: Halstead, B.J., Kleeman, P.M., Rose, J.P. and Fouts, K.J., 2021. Water Temperature and Availability Shape the Spatial Ecology of a Hot Springs Endemic Toad (Anaxyrus williamsi). Herpetologica, 77(1), pp.24-36. https://doi.org/10.1655/HERPETOLOGICA-D-20-00047.
Categories: Data;
Tags: Dixie Meadows,
Ecology,
USGS Science Data Catalog (SDC),
amphibians,
animal tracking,
Observations (reduced to detected/not detected) of 45 vertebrate species (seven mammals, seven amphibians, and 31 reptiles) across Southern California pitfall sampling projects conducted between 1995 through 2015. Habitat patch locations of every pitfall sampling project presented in a shapefile. Habitat patches were measured based on the size when pitfall sampling began within each. Sampling projects within the same geographic area may have different sized patches based on date of project sampling and if patch erosion occurred. A matrix of whether each species was expected within each habitat patch's species pool based on range maps and published records is also included. These data support the following publication:...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Los Angeles County,
Orange County,
Riverside County,
San Bernardino County,
San Diego County,
From 2003-2018, USGS researchers and collaborators conducted mark-recapture studies of the boreal toad at the Lost Trail National Wildlife Refuge in northwestern Montana, USA. The datasets included here contain information on individual toad capture history, body size, and disease status. These data were collected annually over the 16-year period at up to 11 breeding sites per year on the refuge. We include datasets for (1) male toad captures over time, (2) female toad captures over time, (3) male disease status (tested - positive or negative, or not tested in a given year), (4) all toad length and weight data over time, and (5) male toad size and body condition over time.
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Lost Trail National Wildlife Refuge,
Montana,
USGS Science Data Catalog (SDC),
We used 29 years of data on boreal chorus frogs at two sites to view life-history, estimate demographic parameters, assess weather-related covariates, and determine the magnitude of process variation in target parameters. Average estimates of survival probabilities were 0.51 (Standard error [SE]=0.04) and 0.43 (SE=0.04), and average estimates of recruitment probabilities were 0.64 (SE=0.07) and 0.44 (SE=0.04). Process variation accounted for greater than 76% of the total temporal variation in both parameters at one pond and in survival probability alone at the other.
From 2004 to 2006, we used a variety of sampling techniques to survey the amphibians of Savannah National Wildlife Refuge (SNWR), a large protected area straddling the lower portions of the Savannah River on the border between South Carolina and Georgia, USA. We documented 22 amphibian species, 15 frogs and 7 salamanders, with a possible 23rd species present. Amphibians occupied a variety of habitats and appeared tolerant of the mildly acidic and low oxygen conditions of many of the wetlands. This initial survey provides a historic baseline for monitoring amphibian populations as areas adjacent to the refuge.
Categories: Data;
Tags: Amphibians,
Aquatic Biology,
Ecology,
Savannah National Wildlife Refuge,
USGS ARMI,
Desert spring wetlands host many endemic species that require aquatic habitat and are isolated by the surrounding xeric terrestrial habitat. The Dixie Valley Toad (Anaxyrus williamsi) is a recently described anuran species endemic to desert spring wetlands in the Dixie Valley, Churchill County, Nevada, USA. Given this species was only recently recognized as distinct from Anaxyrus boreas, little is known about its ecology and habitat requirements. These data represent the results of surveys for Dixie Valley Toads conducted from April 2018 to May 2021 in Churchill County, Nevada, USA and associated covariates from surveys and study sites. The potential wetland habitat for the Dixie Valley Toad was divided into 20...
The data include concentrations of current use pesticides in tissues of larval wood frog (Lithobates sylvaticus) and spotted salamander (Ambystoma maculatum) and the presence of ranavirus in wood frogs and spotted salamanders from three northeastern National Wildlife Refuges sampled in 2013 and 2014. The data also include estrogenicity, protein phosphatase 2A inhibition and a suite of 15 major and minor elements in sediment screened using portable X-Ray Fluorescence. The data include sediment and tissue samples collected from 16 wetlands at the Patuxent Research Refuge (PRR) in central Maryland, USA, 15 wetlands at the Assabet River and Oxbow National Wildlife Refuges (EMASS) in eastern Massachusetts, USA, and nine...
This dataset includes results from external skin swabbing of Rana boylii and Dicamptodon tenebrosus to test for the fungus Batrachochytrium dendrobatidis from Fox Creek in Mendocino County, California, in 2016-2020. Morphological measurements of swabbed animals were recorded, and Rana boylii had a unique identifier (pit tag) inserted beneath their skin for identification in future capture events. These data supports the following publication: Belasen, A.M., Peek, R.A., Adams, A.J., Russell, I.D., De León, M.E., Adams, M.J., Bettaso, J., Breedveld, K.G.H., Catenazzi, A., Dillingham, C.P. and Grear, D.A., 2024. Chytrid infections exhibit historical spread and contemporary seasonality in a declining stream-breeding...
Categories: Data;
Tags: Ecology,
Fox Creek,
Mendocino County,
USGS Science Data Catalog (SDC),
Wildlife Biology,
These data represent capture mark recapture data along with associated disease status for boreal toads (Anaxyrus boreas) from Wyoming and Montana from 2004-2016 and four frog species (Rana draytonii, R. muscosa, R. pretiosa, R. sierrae) from 2001-2016.
These data are the results of surveys for the Shasta salamander complex (Hydromantes shastae, H. samweli, and H. wintu) conducted at 87 survey plots on the Shasta-Trinity National Forest from April 2019 to March 2020. Time- and area-constrained occupancy surveys were conducted at plots selected within high-priority areas identified by the U.S. Fish and Wildlife Service. There are additional surveys planned for future field seasons. As the Shasta Salamander is under review for listing under the Endangered Species Act, sensitive location information is restricted, and can be made available upon request by contacting the dataset point of contact.
Categories: Data;
Tags: California,
Shasta National Forest,
Shasta-Trinity National Forest,
Trinity National Forest,
amphibians,
Data are from biological and physical environmental assessments conducted during 2018 in the lower Rouge River, MI. Sites were located upstream, downstream, and within the concrete channel section of the lower Rouge River. Water quality parameters, riparian zone characteristics, reptiles and amphibians, fishes, invertebrates, and river channel characteristics (water depth, flow, velocity) were assessed during 2018 from June-October. Previously established standardized sampling methods were used during all assessments.
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