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This R code (YKDsalinity_QC.R) is used to process the raw legacy salinity data for fixed and random plots (2006 - 2019) and produce the quality controlled legacy salinity data for analysis and sharing (YKDsalinity_QC.csv). Basic operations include transforming missing value to a common code, transforming other variables to match the data dictionary, and cleaning spatial location issues. Of special note is that this QC process discover significant error in location data due to a variety of reasons so the random plot centers are added to the data table and should be used for analysis. The code requires the raw data (“Official_YKD.SALINITY.DATA.MASTER.2020.csv”), a definition of the nest plot study area (“NestPlotStudyAreaBoundary.geojson”),...
Categories: Data,
Software;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: BIOSPHERE,
BIOSPHERE,
BIOSPHERE,
DATA INTEROPERABILITY,
DATA INTEROPERABILITY,
This is the YKD egg observation data reformatted from the nest card data (‘Nest_Cards_1985_2019_QC.csv’). The file eggs.R is used to produce this data set, and then this is further summarized into yearly stats on mean initiation and hatch dates to produce the file yearstats.csv.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
From 1995 to 1999, a subset of nest plots were searched twice by field crews to estimate nest detection probability by mark-recapture methods. Over the five years, 30 plots were searched twice and over 2700 unique nests were found. From these data, nest detection probability is estimated using a Huggins-type mark recapture model where individual-level covariate effects of nest and observer attributes were estimated. These estimates are then used to predict nest detection rates in other years based on covariates of nests and observers. Nest detection rates are then applied to annual plot search to estimate nest populations for each species in the sampled area.
Categories: Data,
Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
The Gulf Coast Vulnerability Assessment (GCVA) used an expert opinion approach to qualitatively assess the vulnerability of four ecosystems: mangrove, oyster reef, tidal emergent marsh, and barrier islands, and a suite of wildlife species that depend on them. More than 50 individuals participated in the completion of the GCVA, facilitated via Ecosystem and Species Expert Teams. The GCVA made use of the Standardized Index of Vulnerability and Value Assessment (SIVVA) (Reece and Noss 2014) to provide an objective framework for evaluating vulnerability by guiding assessors through a series of questions related to the changes an ecosystem or species might experience due to climate change and other threats. Assessors...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Alabama,
BARRIER ISLANDS,
BIOSPHERE,
BIOSPHERE,
Barrier Islands,
This dataset was developed as part of the Designing Sustainble Landscapes project led by Professor Kevin McGarigal of UMass Amherst and sponsored by the North Atlantic Landscape Conservation Cooperative (https://www.fws.gov/science/catalog); for more information about the entire project see: http://www.umass.edu/landeco/research/dsl/dsl.htmlThis dataset was last updated 02/2017. The revised version incorporates the addition of a simplified version of The Nature Conservancy's Northeast lakes and ponds classification, visit https://www.conservationgateway.org/ConservationByGeography/NorthAmerica/UnitedStates/edc/reportsdata/freshwater/Pages/Northeast-Lakes.aspx for more details.This dataset represents terrestrial...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Citation,
Downloadable,
Map Service;
Tags: 2010,
2010,
DSL,
DSL,
Data,
This data set shows forests of North America, classified according to FAO ecological zones (EZ). The data set was created by modifying the Ecological Regions of North America (ecoregions) data included in the North American Atlas. Ecoregion classifications were converted to the FAO EZ classes, based on the Forest Resource Assessment (FRA) 2010, and minor adjustments were made to polygon geometry. In addition, data were added for Hawaii and Puerto Rico, and additional lakes were imported. The FAO ecological zones are based on a combination of climate (temperature and precipitation) and potential vegetation classifications. They are broad areas of relatively homogeneous vegetation, with similar physical characteristics....
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Ecological regions ,
Ecological zones,
Ecoregions ,
Ecosystem geography ,
Ecosystems
This dataset contains a raster representing current (2017-2020) core sagebrush, growth opportunity areas, and other rangelands on tribal and federal lands that are estimated to be climate resilient into the future (2030-2060). We determined climate-resiliency by comparing current (2017-2020) core sagebrush, growth opportunity areas, and other rangelands to estimated future (2030-2060) conditions of core and growth opportunity areas under mid-century climate change (Representative Concentration Pathway 8.5) conditions (Doherty et al. 2022). The Department of the Interior (DOI) Sagebrush Keystone Initiative (KI) team worked with partners to identify areas within the sagebrush biome for strategic investments in conservation...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: California,
Colorado,
Conservation,
Idaho,
Montana,
This geopackage contains the density strata that were used to create the Alaska Arctic Coastal Plain Aerial Breeding Pair Survey four-year rotating panel design. This file was derived from a mid-1980’s ArcInfo coverage for the North Slope Eider Survey that was produced through the visual interpretation of 1:250,000-scale LANDSAT imagery and the known nesting density waterfowl in the area.
Categories: Data;
Tags: ANIMALS/VERTEBRATES,
BIOLOGICAL CLASSIFICATION,
BIOSPHERE,
BIRDS,
DUCKS/GEESE/SWANS,
This metadata references the polygonal ARC/INFO GIS cover showing the current and historic distribution of potential habitat, or range, of the Greater Sage-grouse (Centrocercus urophasianus) and Gunnison Sage-grouse (Centrocercus minimus) in Western North America. This data was initially researched and compiled by Dr. Michael A. Schroeder, research biologist for the Washington State Department of Fish and Wildlife. The initial draft of current and historic range data was mapped and submitted to state, federal, or provincial natural resource agencies and other experts for review, comment, and editing. The final product represents the best available science and expert review available at the time of compilation.Definition...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Alberta,
Biology and Ecology,
Bird Conservation,
California,
Canada,
We assessed the impacts of co-occurring invasive plant species on fire regimes and postfire native communities in the Mojave Desert, western USA by analyzing the distribution and co-occurrence patterns of three invasive annual grasses known to alter fuel conditions and community structure: Red Brome (Bromus rubens), Cheatgrass (Bromus tectorum), and Mediterranean grass (Schismus spp.: Schismus arabicus and Schismus barbatus), and an invasive forb, red stemmed filaree (Erodium cicutarium) which can dominate postfire sites. We developed species distribution models (SDMs) for each of the four taxa and analyzed field plot data to assess the relationship between invasives and fire frequency, years postfire, and the impacts...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Mojave desert,
USGS Science Data Catalog (SDC),
biota,
co-occurance invasives,
desert ecosystems,
This file contains results from the project "Assessing climate-sensitive ecosystems in the southeastern U.S.", funded by the Department of Interior's Southeast Climate Science Center. Metrics required to use the Habitat Climate Change Vulnerability Index (HCCVI) framework, as developed by NatureServe are reported in this spreadsheet. The ecosystems are: East Gulf Coastal Plain Near-Coast Pine Flatwoods, and the Nashville Basin Limestone Glade and Woodland.
This part of DS 781 presents data for the acoustic-backscatter map of Offshore of Pigeon Point map area, California. Backscatter data are provided as three separate grids depending on mapping system. This metadata file refers to the data included in "BackscatterB_7125_OffshorePigeonPoint.zip," which is accessible from https://doi.org/10.5066/F7513W80. These data accompany the pamphlet and map sheets of Cochrane, G.R., Watt, J.T., Dartnell, P., Greene, H.G., Erdey, M.D., Dieter, B.E., Golden, N.E., Johnson, S.Y., Endris, C.A., Hartwell, S.R., Kvitek, R.G., Davenport, C.W., Krigsman, L.M., Ritchie, A.C., Sliter, R.W., Finlayson, D.P., and Maier, K.L. (G.R. Cochrane and S.A. Cochran, eds.), 2015, California State Waters...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Acoustic Reflectivity,
Ano Nuevo,
Backscatter,
CMHRP,
Coastal and Marine Hazards and Resources Program,
This dataset contains the physical collection information (e.g., sample location, date, gear type) and microsatellite DNA genotype of egg and larval Lake Sturgeon collected in the St. Clair and Detroit rivers in 2015 and 2016. Individuals were genotyped for 18 microsatellite loci (13 disomic and 5 polysomic). Alleles (base pair sizes) were recorded as presence absence scores (1:present, 2:absent, 0:missing data) for all previously observed alleles. Thus individual genotypes were recorded as pseudo diploid dominant phenotypes resulting in individual vectors of length n=205 for each genotyped egg or larval individual.
Categories: Data;
Tags: Acipenser,
Acipenser fulvescens,
Acipenseridae,
Anthropogenic,
Anthropogenic Rock,
The Gulf Coastal Plains and Ozarks (GCPO) Landscape Conservation Cooperative (LCC) has conducted an ecological assessment of various landscape characteristics, or endpoints, outlined in the LCC Integrated Science Agenda. This data layer addresses the forested wetland amount desired landscape endpoint for the forested wetland ecosystem in the Mississippi Alluvial Valley subgeography of the GCPO LCC. This data was created by reclassification of the 2011 National Land Cover Dataset (NLCD) to pull out only the woody wetlands class (90) from the NLCD dataset.
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Downloadable,
Map Service;
Tags: AQUATIC ECOSYSTEMS,
AQUATIC ECOSYSTEMS,
BIOSPHERE,
BIOSPHERE,
BIOSPHERE,
Limited midstory density was also identified in the Integrated Science Agenda as an important component of upland hardwood systems in the GCPO geography, with midstory coverage ≤20% indicating a healthy additional vertical strata in the system. Midstory is an important habitat component for several ISA priority species, particularly those avian species who require midstory structure for nesting such as the wood thrush (Hylocichla mustelina). We again used plot-level Forest Inventory and Assessment data imputed at 250 m resolution across the GCPO LCC to assess tree density. The USFS imputed tree density data product provides raster maps for the conterminous U.S. generated using 250 m resolution MODIS satellite imagery,...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: BIOSPHERE,
BIOSPHERE,
Data,
EARTH SCIENCE,
EARTH SCIENCE,
This data layer summarizes ecological systems and land cover classes described in state-level and national-level maps as Broadly Defined Habitats for groups of species of conservation concern. Each grid cell in the raster is assigned a Condition Index value based on desired condition metrics using ancillary datasets and a decision tree approach for each assessed habitat. Grid cells are also assigned bar code descriptors indicating which metrics contributed to the Condition Index score for that cell. This layer also contains information about potential habitats based on the LANDFIRE Biophysical Settings data layer. This layer was developed to support the next iteration of the Conservation Blueprint developed by the...
Categories: Data,
Map;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Downloadable,
Map Service;
Tags: Arkansas,
Ecological Systems,
Ecosystems,
Habitats,
Species of Concern,
Geographically Isolated Wetlands (GIWs) occur along gradients of hydrologic and ecological connectivity and isolation, even within wetland types (e.g., forested, emergent marshes) and functional classes (e.g., ephemeral systems, permanent systems, etc.). Within a given watershed, the relative positions of wetlands and open-waters along these gradients influence the type and magnitude of their chemical, physical, and biological effects on downgradient waters. In addition, the ways in which GIWs connect to the broader hydrological landscape, and the effects of such connectivity on downgradient waters, depends largely upon climate, geology, and relief, the heterogeneity of which expands with increasing scale. Developing...
Categories: Data,
Project;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Active,
All Working Groups,
Ecosystems,
Geographically isolated wetlands, depressional wetlands, perimeter,
Water,
The grizzly bear distribution boundary represents the estimated geographic extent of occupied range of the Yellowstone grizzly bear population for the period 2008-2022. The distribution boundary was delineated to provide reliable estimations of grizzly bear occupancy throughout time and for use as a monitoring tool in grizzly bear management and conservation.The boundary was delineated by the Interagency Grizzly Bear Study Team (IGBST) using an interpolation method based on grizzly bear VHF telemetry and GPS locations as well as verified observations and signs of grizzly bears inside the Greater Yellowstone Ecosystem during 2008 to 2022.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Beaverhead-Deerlodge,
Bridger-Teton,
Caribou-Targhee,
Custer-Gallatin,
Ecology,
This data set shows Level I, II, and III ecological regions (ecoregions) of North America, and is an update and revision of files developed by Canada, Mexico, and the United States of America in the late 1990’s in a cooperative project for the Commission for Environmental Cooperation (CEC). These revised ecological regions were developed in a meeting between representatives of the three nations and CEC in April 2006 in Newport, Oregon. Ecoregions are areas of general similarity in ecosystems and in the type, quality, and quantity of environmental resources. The ecoregions in this data set are based on the premise that a hierarchy of ecological regions can be identified through the analysis of the patterns and...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Ecoregions,
Ecosystem geography ,
Ecosystems,
Regional ecology
This multi-layer GeoPackage contains the Alaska Arctic Coastal Plain Aerial Breeding Pair Survey design transects from 2007 to present. The original transects were created as shapefiles and imported to this SQLite database. Transects were saved as individual polylines named according to the year they were created (e.g., “main.ACP_2007_Trans,” “main.ACP_2008_Trans,” “main.ACP_2009_Trans,” etc.). These aerial transects were developed systematically from randomly-selected start points and created along constant lines of latitude. The inter-transect spacing in the low, medium, high, and very-high density strata varies so that areas with higher waterfowl density are surveyed more intensively. The current four-year rotating...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: ANIMALS/VERTEBRATES,
BIOLOGICAL CLASSIFICATION,
BIOSPHERE,
BIRDS,
DATA ANALYSIS AND VISUALIZATION,
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