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This work provides a flexible and scalable framework to assess the impacts of climate change on streamflow and stream temperature within the North Atlantic Landscape Conservation Cooperative (NALCC) region. This is accomplished through use of lumped parameter, physically-based, conceptual hydrologic and stream temperature models formulated in a hierarchical Bayesian framework. This allows for model predictions of streamflow and temperature at ungaged locations and a formal accounting of model estimate uncertainty at each location, something not previously achieved in these models. These environmental models will also link seamlessly with the land use and fish models. The final products of this project will provide:...
Data presented are results of surveys in 2021 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at the 2016-19 nest monitoring locations (Cleveland National Forest, Rey River Ranch, and Vista Irrigation District) and at Lake Henshaw along the Upper San Luis Rey River. Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded or not, and if so, color combination), and breeding status (paired, undetermined, or transient)...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: San Diego,
San Luis Rey River,
biota,
birds,
endangered species,
The Yukon-Kuskokwim Delta of Alaska is a globally important region for numerousavian species including millions of migrating and nesting waterbirds. Climate change effectssuch as sea level rise and increased storm frequency and intensity have the potential to impactwaterbird populations and breeding habitat. In order to determine the potential impacts of theseclimate-mediated changes, we investigated both short-term and long-term impacts of stormsurges to geese and eider species that commonly breed on the Yukon-Kuskokwim Delta. Todetermine short-term impacts, we compared nest densities of geese and eiders in relation to themagnitude of storms that occurred in the prior fall from 2000–2013. Additionally, we modeledgeese...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: BIRDS,
BIRDS,
CLIMATE CHANGE IMPACT ASSESSMENT MODELS,
CLIMATE CHANGE IMPACT ASSESSMENT MODELS,
DELTAS,
This project evaluated the potential impacts of storm surges and relative sea level rise on nesting geese and eider species that commonly breed on the Yukon-Kuskokwim Delta (Y-K Delta). Habitat suitability maps for breeding waterbirds were developed to identify current waterbird breeding habitat and distributions. Short-term climate change impacts were assessed by comparing nest densities in relation to magnitude of storms that occurred in the prior fall from 2000-2013. Additionally, nest densities were modeled using random forests in relation to the time-integrated flood index (e.g., a storm specific measure accounting for both water depth and duration of flooding) for four modeled storms (2005, 2006, 2009, and...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: BIRDS,
BIRDS,
CLIMATE CHANGE IMPACT ASSESSMENT MODELS,
CLIMATE CHANGE IMPACT ASSESSMENT MODELS,
DELTAS,
The Yukon-Kuskokwim Delta of Alaska is a globally important region for numerous avian species including millions of migrating and nesting waterbirds. Climate change effects such as sea level rise and increased storm frequency and intensity have the potential to impact waterbird populations and breeding habitat. In order to determine the potential impacts of these climate-mediated changes, we investigated both short-term and long-term impacts of storm surges to geese and eider species that commonly breed on the Yukon-Kuskokwim Delta.To do this, we used 29 years of ground-based surveys conducted as part of the U.S. Fish and Wildlife Service’s long-term waterbird monitoring program along with flood indices modeled...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: BIRDS,
BIRDS,
CLIMATE CHANGE IMPACT ASSESSMENT MODELS,
CLIMATE CHANGE IMPACT ASSESSMENT MODELS,
DELTAS,
We provide genetic and distribution data for the Louisiana Pigtoe, Pleurobema riddellii, to guide decisions related to federal protection for the species under the U.S. Endangered Species Act. Our final dataset includes 125 COI sequences generated as part of our study representing P. riddellii from eight North American river basins. This includes the COI sequence we generated from a museum specimen collected from the Trinity River in the late 1900s, which is the first genetic confirmation of P. riddellii in the Trinity River basin. Also included are sequences from specimens initially identified as Fusconaia cerina (n=3) Fusconaia flava (n=1), Fusconaia sp. (n=5), Pleurobema sintoxia (n=10), and Pustulosa pustulosa...
We investigated fine-scale genetic patterns of the federally threatened Eastern Massasauga Rattlesnake (Sistrurus catenatus) on a relatively undisturbed island in northern Michigan, USA. This species often persists in habitat islands throughout much of its distribution due to extensive habitat loss and distance-limited dispersal. These data are from 102 individual Eastern Massasauga Rattlesnakes sampled at Bois Blanc Island, Michigan and genotyped at 15 microsatellite loci. Samples were collected as part of a study to examine functional connectivity for the Eastern Massasauga. We found that the entire island population exhibited weak genetic structuring with spatially segregated variation in effective migration...
This dataset consists of one table with sample collection locations and results of screening resident wildlife for Cryptosporidium and Giardia in the Alaskan Arctic, 2012-2017. We analyzed feces collected from polar bear, Pacific walrus, Arctic fox, and caribou with MERIFLUOR direct immunofluorescence assay to determine the presence of Cryptosporidium oocysts and Giardia cysts.
Data were collected as part of a long-term capture-recapture program to assess the population dynamics of two long-lived, federally endangered catostomids in Upper Klamath Lake, Oregon. Lost River suckers (LRS; Deltistes luxatus) and shortnose suckers (SNS; Chasmistes brevirostris) have been captured and tagged with passive integrated transponder (PIT) tags during their spawning migrations in each year since 1995. Cormack-Jolly-Seber (CJS) open population capture-recapture models were used to estimate annual survival probabilities, and a reverse-time analog of the CJS model was used to estimate recruitment of new individuals into the spawning population. In addition, data on the size composition of captured fish...
Categories: Data;
Tags: Aquatic Biology,
USGS Science Data Catalog (SDC),
Upper Klamath Lake,
biota,
demographic rates,
This data is a companion to the manuscript titled "Data integration reveals dynamic and systematic patterns of breeding habitat use by a threatened shorebird". Advances in both remote sensing and analytical tools for spatial data have allowed for the integration of dynamic processes into species distribution models. We developed a spatiotemporal model of breeding habitat use and density for a federally threatened shorebird (piping plover, Charadrius melodus) by integrating a 20-year (2000 – 2019) nesting dataset with opportunistic, volunteer collected (eBird), sightings. Piping plovers are an ideal candidate for dynamic habitat models because this species depends on habitat created and maintained by highly variable...
This project evaluated the potential impacts of storm surges and relative sea level rise on nesting geese and eider species that commonly breed on the Yukon-Kuskokwim Delta (Y-K Delta). Habitat suitability maps for breeding waterbirds were developed to identify current waterbird breeding habitat and distributions. Short-term climate change impacts were assessed by comparing nest densities in relation to magnitude of storms that occurred in the prior fall from 2000-2013. Additionally, nest densities were modeled using random forests in relation to the time-integrated flood index (e.g., a storm specific measure accounting for both water depth and duration of flooding) for four modeled storms (2005, 2006, 2009, and...
Categories: Data,
Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: DELTAS,
DELTAS,
DUCKS/GEESE/SWANS,
DUCKS/GEESE/SWANS,
Decision Support,
Data presented are results of surveys in 2020 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at the 2016-19 nest monitoring locations (Cleveland National Forest, Rey River Ranch, and Vista Irrigation District) and at Lake Henshaw along the Upper San Luis Rey River. Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded or not, and if so, color combination), and breeding status (paired, undetermined, or transient)...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: San Diego,
San Luis Rey River,
biota,
birds,
endangered species,
Data presented are results of surveys in 2022 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at the 2016-19 nest monitoring locations (Cleveland National Forest, Rey River Ranch, and Vista Irrigation District) and at Lake Henshaw along the Upper San Luis Rey River. Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded or not, and if so, color combination), and breeding status (paired, undetermined, or transient)...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Ecology,
San Diego,
San Luis Rey River,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Hawaiian hoary bats ('ōpe'ape'a; Lasiurus semotus) were captured and tracked back to roosting locations on Hawaiʻi Island from 2018-2021. We examined resource selection at multiple spatial scales - perch location within a roost tree, roost tree, and forest stand. We used a discrete choice modeling approach to investigate roost selection and describe attributes of day-roost trees including those used as maternity roosts. ‘Ōpe‘ape‘a were found roosting in a variety of tree species and in an assortment of habitat types including native and non-native habitats. This data release consists of six tabular datasets: (1) Hawaiʻi Island ʻōpeʻapeʻa roost perch metrics, 2019–2021, (2) Hawai‘i Island ʻōpeʻapeʻa roost tree metrics,...
Hawaiian hoary bats ('ōpe'ape'a; Lasiurus semotus) were captured and tracked back to roosting locations on Hawaiʻi Island. Roost stand metrics were observed and collected from 2018 to 2021. We observed a total of 123 roost trees used by 90 bats (29 female; 58 male; 3 unknown). This data file includes data pertaining to roost stand metrics including, elevation, slope, canopy tree species, and mean canopy height.
The endangered Cape Sable seaside sparrow (Ammospiza maritima mirabilis; CSSS) occurs in marl prairie habitat at the southern end of the Everglades, at the southernmost part of the Florida peninsula. The locations of three of its six subpopulations are proximate to the coast, putting them at risk for inundation caused by sea level rise (SLR). The spatially explicit predictive model EverSparrow provides probability of CSSS presence estimates based on hydrology, fire history, and vegetation. We developed two hydrologic scenarios of SLR using projections from the U.S. Army Corps of Engineers (USACE) and University of Florida's GeoPlan Center, using a modeled restoration scenario of the current landscape-scale water...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Ecology,
Everglades,
Everglades National Park,
Florida,
Southern Florida,
Hawaiian hoary bats ('ōpe'ape'a; Lasiurus semotus) were surveyed at 23 sites on Hawaiʻi Island from 33 to 2,341 m elevation from May 2018 to August 2021. Of the 23 sites, 8 were established as fixed survey sites for sampling at repeated intervals from January 2019 through January 2021. We surveyed each fixed site at least once per four month period (January–April, May–August, September–December), with a survey comprising one to three netting events. Additional opportunistic surveys were conducted at alternate locations or on alternate dates. We captured 138 unique bats (37 female, 101 male) and recaptured 10 bats over 224 mist-netting events. This data file includes data pertaining to mist netting effort locations,...
‘Ōpe‘ape‘a (Hawaiian hoary bats; Lasiurus semotus) were surveyed at 23 sites on Hawaiʻi Island from 33 to 2,341 m elevation from May 2018 to August 2021. Bats were captured using mist nets; once detangled from mist nets, bats were secured in cloth holding bags for up to 10 min before collecting age, sex, reproductive condition, mass, forearm length, and biological samples and marking individuals with split ring bands and attaching very high frequency (VHF) radio transmitters. We captured 138 uniquely identified individuals (37 female, 101 male), of which 10 were recaptured (4 female, 6 male) and an additional 10 were ensnared in nets and escaped, for a total of 158. This data file includes data related to individual...
Known observations and distribution of Pacific Lamprey for Oregon, Washington, and Idaho from the Columbia River Fish and Wildlife Conservation Office managed database on behalf of the PLCI. Observation data includes points for Lampetra species when information provided. Current as of December 2020. Older datasets can be found in the archived data folder. Files available for download: Service Definition file (if downloaded files need to be extracted to then open in desktop programs) Zipped ESRI File Geodatabase, Zipped Shapefiles Layer files for ArcMap and ArcGIS Pro Google Earth kmz files Metadata Online interactive map with these datasets are available: AGOL: DataBasin: https://databasin.org/datasets/a243fb1346ca4258b6388c5f7a90aee4
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Citation,
Downloadable,
Map Service;
Tags: Anadromous Fish,
Anadromous Fish,
Aquatic Species,
Aquatic Species,
Biota,
The spatial data results of USGS surveys for Least Bell's Vireo (Vireo bellii pusillus, LBVI) along the Tijuana River and San Diego River in 2020 to determine abundance and distribution of vireos to facilitate population trend analyses and collect information on dispersal and site fidelity of banded vireos as part of long-term demographic studies at multiple sites.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: San Diego County,
San Diego River,
Tijuana River,
USGS Science Data Catalog (SDC),
Wildlife Biology,
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