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Evaluating Climate-Induced Runoff and Temperature Change on Stream Habitat Metrics for Endangered or Threatened Fish - BOR Project FY2011 We will develop a set of linked models to help predict the effects of climate change on rivers and endangered species. These will include watershed- and reach-scale models to predict streamflow, water temperatures, and other fish habitat metrics under various climatic scenarios for the reaches used by species listed under the Endangered Species Act (ESA), plus a combined bioenergetics and life-cycle model (to be done by the U.S. Geological Survey [USGS]) to assess the impact of these factors on fish growth, reproduction, and survival. We propose to test the model framework at a site on the Methow River, Washington, to explore additional opportunities for collaboration and model development. Categories: Project; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service, ScienceBase Project; Tags: Habitat, climate change, endangered species, fish habitat, food web, All tags... modeling, salmonids, stream rehabilitation, Fewer tags Southwestern Willow Flycatcher (Empidonax traillii extimus) Surveys in San Diego County, California, 2021 Data presented are results of surveys in 2021 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at the 2016-19 nest monitoring locations (Cleveland National Forest, Rey River Ranch, and Vista Irrigation District) and at Lake Henshaw along the Upper San Luis Rey River. Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded or not, and if so, color combination), and breeding status (paired, undetermined, or transient)... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego, San Luis Rey River, biota, birds, endangered species, All tags... habitats, population and community ecology, riparian habitats, survey, survival, Fewer tags Final Report: The Influence of Fall Storms on Nest Densities of Geese and Eiders on the Yukon-Kuskokwim Delta of Alaska The Yukon-Kuskokwim Delta of Alaska is a globally important region for numerousavian species including millions of migrating and nesting waterbirds. Climate change effectssuch as sea level rise and increased storm frequency and intensity have the potential to impactwaterbird populations and breeding habitat. In order to determine the potential impacts of theseclimate-mediated changes, we investigated both short-term and long-term impacts of stormsurges to geese and eider species that commonly breed on the Yukon-Kuskokwim Delta. Todetermine short-term impacts, we compared nest densities of geese and eiders in relation to themagnitude of storms that occurred in the prior fall from 2000–2013. Additionally, we modeledgeese... Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: BIRDS, BIRDS, CLIMATE CHANGE IMPACT ASSESSMENT MODELS, CLIMATE CHANGE IMPACT ASSESSMENT MODELS, DELTAS, All tags... DELTAS, DELTAS, DELTAS, DUCKS/GEESE/SWANS, DUCKS/GEESE/SWANS, ENDANGERED SPECIES, ENDANGERED SPECIES, EROSION, EROSION, ESTUARINE WETLANDS, ESTUARINE WETLANDS, FLOODS, FLOODS, Federal resource managers, HABITAT CONVERSION/FRAGMENTATION, HABITAT CONVERSION/FRAGMENTATION, INUNDATION, INUNDATION, LCC Network Science Catalog, PALUSTRINE WETLANDS, PALUSTRINE WETLANDS, Policy makers & regulators, Report, SALTWATER INTRUSION, SALTWATER INTRUSION, SEA LEVEL RISE, SEA LEVEL RISE, SEA LEVEL RISE, SEA LEVEL RISE, SEDIMENT TRANSPORT, SEDIMENT TRANSPORT, SEDIMENTATION, SEDIMENTATION, SEVERE STORMS, SEVERE STORMS, SPECIES LIFE HISTORY, SPECIES LIFE HISTORY, STORM SURGE, STORM SURGE, STORMS, STORMS, Tribes, USE/FEEDING HABITATS, USE/FEEDING HABITATS, WETLANDS, WETLANDS, Western Alaska Landscape Conservation Cooperative data.gov, biota, biota, climatologyMeteorologyAtmosphere, climatologyMeteorologyAtmosphere, completed, environment, environment, oceans, oceans, Fewer tags Part I Summary: Predicting waterbird nest distributions This project evaluated the potential impacts of storm surges and relative sea level rise on nesting geese and eider species that commonly breed on the Yukon-Kuskokwim Delta (Y-K Delta). Habitat suitability maps for breeding waterbirds were developed to identify current waterbird breeding habitat and distributions. Short-term climate change impacts were assessed by comparing nest densities in relation to magnitude of storms that occurred in the prior fall from 2000-2013. Additionally, nest densities were modeled using random forests in relation to the time-integrated flood index (e.g., a storm specific measure accounting for both water depth and duration of flooding) for four modeled storms (2005, 2006, 2009, and... Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: BIRDS, BIRDS, CLIMATE CHANGE IMPACT ASSESSMENT MODELS, CLIMATE CHANGE IMPACT ASSESSMENT MODELS, DELTAS, All tags... DELTAS, DELTAS, DELTAS, DUCKS/GEESE/SWANS, DUCKS/GEESE/SWANS, ENDANGERED SPECIES, ENDANGERED SPECIES, EROSION, EROSION, ESTUARINE WETLANDS, ESTUARINE WETLANDS, FLOODS, FLOODS, Federal resource managers, HABITAT CONVERSION/FRAGMENTATION, HABITAT CONVERSION/FRAGMENTATION, INUNDATION, INUNDATION, LCC Network Science Catalog, PALUSTRINE WETLANDS, PALUSTRINE WETLANDS, Policy makers & regulators, Report, SALTWATER INTRUSION, SALTWATER INTRUSION, SEA LEVEL RISE, SEA LEVEL RISE, SEA LEVEL RISE, SEA LEVEL RISE, SEDIMENT TRANSPORT, SEDIMENT TRANSPORT, SEDIMENTATION, SEDIMENTATION, SEVERE STORMS, SEVERE STORMS, SPECIES LIFE HISTORY, SPECIES LIFE HISTORY, STORM SURGE, STORM SURGE, STORMS, STORMS, Tribes, USE/FEEDING HABITATS, USE/FEEDING HABITATS, WETLANDS, WETLANDS, Western Alaska Landscape Conservation Cooperative data.gov, biota, biota, climatologyMeteorologyAtmosphere, climatologyMeteorologyAtmosphere, completed, environment, environment, imageryBaseMapsEarthCover, imageryBaseMapsEarthCover, oceans, oceans, Fewer tags Webinar (2015 Oct 14) The Yukon-Kuskokwim Delta of Alaska is a globally important region for numerous avian species including millions of migrating and nesting waterbirds. Climate change effects such as sea level rise and increased storm frequency and intensity have the potential to impact waterbird populations and breeding habitat. In order to determine the potential impacts of these climate-mediated changes, we investigated both short-term and long-term impacts of storm surges to geese and eider species that commonly breed on the Yukon-Kuskokwim Delta.To do this, we used 29 years of ground-based surveys conducted as part of the U.S. Fish and Wildlife Service’s long-term waterbird monitoring program along with flood indices modeled... Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: BIRDS, BIRDS, CLIMATE CHANGE IMPACT ASSESSMENT MODELS, CLIMATE CHANGE IMPACT ASSESSMENT MODELS, DELTAS, All tags... DELTAS, DELTAS, DELTAS, DUCKS/GEESE/SWANS, DUCKS/GEESE/SWANS, ENDANGERED SPECIES, ENDANGERED SPECIES, EROSION, EROSION, ESTUARINE WETLANDS, ESTUARINE WETLANDS, FLOODS, FLOODS, Federal resource managers, HABITAT CONVERSION/FRAGMENTATION, HABITAT CONVERSION/FRAGMENTATION, INUNDATION, INUNDATION, LCC Network Science Catalog, PALUSTRINE WETLANDS, PALUSTRINE WETLANDS, Policy makers & regulators, SALTWATER INTRUSION, SALTWATER INTRUSION, SEA LEVEL RISE, SEA LEVEL RISE, SEA LEVEL RISE, SEA LEVEL RISE, SEDIMENT TRANSPORT, SEDIMENT TRANSPORT, SEDIMENTATION, SEDIMENTATION, SEVERE STORMS, SEVERE STORMS, SPECIES LIFE HISTORY, SPECIES LIFE HISTORY, STORM SURGE, STORM SURGE, STORMS, STORMS, Tribes, USE/FEEDING HABITATS, USE/FEEDING HABITATS, WETLANDS, WETLANDS, Western Alaska Landscape Conservation Cooperative data.gov, biota, biota, climatologyMeteorologyAtmosphere, climatologyMeteorologyAtmosphere, completed, environment, environment, imageryBaseMapsEarthCover, imageryBaseMapsEarthCover, oceans, oceans, presentation, Fewer tags Genotypes for six rare plant species found in San Diego County in 2016-2017 To understand the genetic structure of six rare plant species (Acanthomintha ilicifolia, Baccharis vanessae, Chloropyron maritimum ssp. maritimus, Deinandra conjugens, Dicranostegia orcuttiana, Monardella viminea), we obtained samples from known occurrences in San Diego County, prepared and sequenced ddRAD genomic libraries, and developed and analyzed a panel of genetic markers to assess population diversity and divergence. We provide this SNP genotype dataset in Structure format, produced in Stacks v2.0b8, for future monitoring efforts and population genetic analysis. These data support the following publication: Milano, E.R., and Vandergast, A.G., 2018, Population genomic surveys for six rare plant species in... Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Botany, Genetics, San Diego, USGS Science Data Catalog (SDC), biological population management, All tags... ddRADseq, endangered species, genetic diversity, plants (organisms), Fewer tags LTRM Fisheries Data - Stratified Random and Fixed Site Sampling The Long Term Resource Monitoring (LTRM) annual fish monitoring began on the Upper Mississippi and Illinois Rivers in 1989. During the first two years samples were collected at a series of fixed sampling sites, then in 1993 a stratified random sampling approach was added to the collection effort. This approach utilizes a computer routine that randomly selects sampling sites from a pool of potential sites that have been categorized by strata (e.g., aquatic habitat type, distance to shore, connectivity to main channel). The results from these collections are stored in an Oracle database at the Upper Midwest Environmental Science Center (UMESC). UMESC provides free access to the data through the Centers Web site (www.umesc.usgs.gov).... Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Fish, Fishery, Illinois, Illinois River, Iowa, All tags... LTRMP, Minnesota, Mississippi River, Missouri, Open River, Pool 13, Pool 26, Pool 4, Pool 8, UMESC, UMRS, Upper Mississippi River, Wisconsin, abundance, biodiversity, endangered species, flood, floodplain, habitat, monitoring, river, status and trends, temperate floodplain river, threatened species, trend, Fewer tags USFWS Critical Habitat - Line (MRB) Critical habitat lines - Mississippi River BasinWhen a species is proposed for listing as endangered or threatened under the Endangered Species Act, the U.S. Fish and Wildlife Service must consider whether there are areas of habitat believed to be essential the species’ conservation. Those areas may be proposed for designation as “critical habitat.” Critical habitat is a term defined and used in the Act. It is a specific geographic area(s) that contains features essential for the conservation of a threatened or endangered species and that may require special management and protection. Critical habitat may include an area that is not currently occupied by the species but that will be needed for its recovery. An area... Categories: Data; Types: Citation, Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Biota, Critical Habitat, Endangered species, Listed species, Threatened species, All tags... biota, environment, ngda, Fewer tags The impacts of storm surges on breeding waterbirds on the Yukon-Kuskokwim Delta, Alaska: past effects and future projected impacts This project evaluated the potential impacts of storm surges and relative sea level rise on nesting geese and eider species that commonly breed on the Yukon-Kuskokwim Delta (Y-K Delta). Habitat suitability maps for breeding waterbirds were developed to identify current waterbird breeding habitat and distributions. Short-term climate change impacts were assessed by comparing nest densities in relation to magnitude of storms that occurred in the prior fall from 2000-2013. Additionally, nest densities were modeled using random forests in relation to the time-integrated flood index (e.g., a storm specific measure accounting for both water depth and duration of flooding) for four modeled storms (2005, 2006, 2009, and... Categories: Data, Project; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: DELTAS, DELTAS, DUCKS/GEESE/SWANS, DUCKS/GEESE/SWANS, Decision Support, All tags... ENDANGERED SPECIES, ENDANGERED SPECIES, EROSION, EROSION, ESTUARINE WETLANDS, ESTUARINE WETLANDS, FLOODS, FLOODS, Federal resource managers, INUNDATION, INUNDATION, LCC Network Science Catalog, Map, PALUSTRINE WETLANDS, PALUSTRINE WETLANDS, Policy makers & regulators, Population & Habitat Evaluation/Projection, Presentation, Project, Publication, Report, SALTWATER INTRUSION, SALTWATER INTRUSION, SEA LEVEL RISE, SEA LEVEL RISE, SEDIMENT TRANSPORT, SEDIMENT TRANSPORT, SEDIMENTATION, SEDIMENTATION, SEVERE STORMS, SEVERE STORMS, SPECIES LIFE HISTORY, SPECIES LIFE HISTORY, STORM SURGE, STORM SURGE, Tribes, USE/FEEDING HABITATS, USE/FEEDING HABITATS, Vulnerability Assessment, WETLANDS, WETLANDS, biota, biota, completed, environment, environment, Fewer tags Southwestern Willow Flycatcher (Empidonax traillii extimus) Surveys in San Diego County, California, 2020 Data presented are results of surveys in 2020 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at the 2016-19 nest monitoring locations (Cleveland National Forest, Rey River Ranch, and Vista Irrigation District) and at Lake Henshaw along the Upper San Luis Rey River. Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded or not, and if so, color combination), and breeding status (paired, undetermined, or transient)... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego, San Luis Rey River, biota, birds, endangered species, All tags... habitats, population and community ecology, riparian habitats, survey, survival, Fewer tags Southwestern Willow Flycatcher (Empidonax traillii extimus) Surveys in San Diego County, California, 2022 Data presented are results of surveys in 2022 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at the 2016-19 nest monitoring locations (Cleveland National Forest, Rey River Ranch, and Vista Irrigation District) and at Lake Henshaw along the Upper San Luis Rey River. Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded or not, and if so, color combination), and breeding status (paired, undetermined, or transient)... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Ecology, San Diego, San Luis Rey River, USGS Science Data Catalog (SDC), Wildlife Biology, All tags... biota, birds, endangered species, habitats, population and community ecology, riparian habitats, survey, survival, Fewer tags Laboratory studies on the thermal biology of freshwater mussels and their host fish species Data are included for laboratory studies evaluating the thermal biology of several freshwater mussel species and their host fish including dwarf wedgemussel (Alasmidonta heterodon), brook floater (Alasmidonta varicosa), creeper (Strophitus undulatus), eastern elliptio mussel (Elliptio complanata), tesselated darter (Etheostoma olmstedi), and slimy sculpin (Cottus cognatus). Thermal endpoints include critical thermal maximum, temperature preference, oxygen consumption rates, and clearance rates of organisms acclimated to a range of temperature treatments. Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Aquatic Biology, Delaware River, Ecology, Susquehanna River, USGS Science Data Catalog (SDC), All tags... aquatic biology, endangered species, fish, mollusks, native species, Fewer tags Estimated Probabilities from Lidar Models for Marbled Murrelet (Brachyramphus marmoratus) Occupancy in Forest Vegetation Stands in the Siuslaw National Forest, Oregon We developed a LiDAR-based habitat model for the threatened Marbled Murrelet (MAMU) in the Siuslaw National Forest, Oregon, using a two-step approach. First, we tested the applicability of the LiDAR-based model developed for the Coos Bay District of the Bureau of Land Management (BLM) to the Siuslaw N.F. In the second step, we tested alternative habitat models developed with forest structural data and Murrelet survey data from the Siuslaw N.F. We compared the performance of each model to provide forest managers with the best predictive tool to guide habitat management for the Marbled Murrelet. This shapefile contains the probability of Marbled Murrelet occupancy values of each model for vegetation polygons defined... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Ecology, Forestry, Land Use Change, Oregon, Oregon Coast Range, All tags... Pacific Northwest, Remote Sensing, Siuslaw National Forest, USGS Science Data Catalog (SDC), Wildlife Biology, biota, birds, endangered species, environment, forest ecosystems, lidar, remote sensing, vegetation, Fewer tags Distribution and Breeding Status of Least Bell’s Vireo Along the San Diego and Tijuana Rivers in San Diego County, California (2020) The spatial data results of USGS surveys for Least Bell's Vireo (Vireo bellii pusillus, LBVI) along the Tijuana River and San Diego River in 2020 to determine abundance and distribution of vireos to facilitate population trend analyses and collect information on dispersal and site fidelity of banded vireos as part of long-term demographic studies at multiple sites. Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego County, San Diego River, Tijuana River, USGS Science Data Catalog (SDC), Wildlife Biology, All tags... biota, endangered species, southern California, wetland ecosystems, Fewer tags Distribution and Abundance of Least Bell's Vireos (Vireo bellii pusillus) and Southwestern Willow Flycatchers (Empidonax traillii extimus) on the Middle San Luis Rey River, San Diego County, Southern California in 2021 We surveyed for Least Bell’s Vireos (Vireo bellii pusillus; vireo) and Southwestern Willow Flycatchers (Empidonax traillii extimus; flycatcher) along the San Luis Rey River, between College Boulevard in Oceanside and Interstate 15 in Fallbrook, California (middle San Luis Rey River), in 2021. Surveys were conducted from April 13 to July 14 (vireo) and from May 18 to July 13 (flycatcher). We found 180 vireo territories, at least 125 of which were occupied by pairs. The vireo population size decreased by 6 percent from 2020 to 2021. One resident flycatcher, of undetermined breeding status, was observed in the survey area in 2021. He was detected from May 20 to June 4, 2021, and no evidence of pairing or nesting was... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego, Southern California, USGS Science Data Catalog (SDC), Wildlife Biology, endangered species, All tags... wetland ecosystems, Fewer tags Rangewide Occupancy and Post-Fire Recovery of California Gnatcatchers in Southern California, 2015-2016 Data presented are results of surveys for California Gnatcatchers and vegetation sampling conducted in 2015 and 2016 to address two inter-related questions: (1) How have gnatcatchers and their habitat recovered in areas burned by wildfires in 2003, 2007, and 2014?, and (2) What is the current regional occupancy of gnatcatchers throughout their southern California range? Data for the post-fire study were collected in 2015 and 2016, while the regional occupancy survey was conducted in 2016. In 2015, Gnatcatcher occupancy as a function of fire history was derived from 324 points in the following fire categories: 2003-2006 (106 points), 2007-2010 (111 points), and 2011-2014 (107 points). In 2016, points representing... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego, biogeography, biota, coastal sage scrub, endangered species, All tags... occupancy, plant and animal tagging, post-fire recovery, southern California, survey, Fewer tags USFWS Critcal Habitat -All Layers Critical habitat are areas considered essential for the conservation of a listed species. These areas provide notice to the public and land managers the importance of these areas to the conservation of this species. Special protections and/or restrictions are possible in areas where federal funding, permits, licenses, authorizations, or actions occur or are required. Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: ESA, Endangered species, critical habitat, fish, wildlife Proposed and Final Critical Habitat Designations These data identify, in general, the areas where final critical habitat exist for species listed as endangered or threatened. Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Academics & scientific researchers, Alabama, BIOSPHERE, BIOSPHERE, Conservation NGOs, All tags... Critical Habitat, Data, EARTH SCIENCE, EARTH SCIENCE, ECOLOGICAL DYNAMICS, ECOLOGICAL DYNAMICS, ENDANGERED SPECIES, ENDANGERED SPECIES, Federal resource managers, Final Rule, Florida, Florida, Floridia, Floridia, LCC Network Science Catalog, Louisiana, Mississippi, Regional & county planners, SPECIES/POPULATION INTERACTIONS, SPECIES/POPULATION INTERACTIONS, State agencies, Texas, U.S. Fish and Wildlife Service, USFWS, biota, completed, Fewer tags Rangewide Occupancy and Post-Fire Recovery of California Gnatcatchers in Southern California, 2020 Data presented are results of surveys for California gnatcatchers and vegetation sampling conducted in 2015, 2016, and 2020 to address two inter-related questions: (1) How have gnatcatchers and their habitat recovered in areas burned by wildfires in 2003, 2007, and 2014?, and (2) What is the current regional occupancy of gnatcatchers throughout their southern California range? Data for the post-fire study were collected in 2015, 2016, and 2020, while the regional occupancy survey was conducted in 2016, and 2020. In 2015, gnatcatcher occupancy as a function of fire history was derived from 324 points in the following fire categories: 2003-2006 (106 points), 2007-2010 (111 points), and 2011-2014 (107 points). In 2016,... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Botany, Ecology, San Diego, USGS Science Data Catalog (SDC), Wildlife Biology, All tags... coastal sage scrub, endangered species, occupancy, post-fire recovery, southern California, survey, Fewer tags Southwestern Willow Flycatcher (Empidonax traillii extimus) Surveys and Nest Monitoring in San Diego County, California, 2019 Data presented are results of surveys and monitoring in 2019 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at locations along Cottonwood Creek, Tijuana River, and the San Luis Rey River, and nest monitoring was performed at three locations along the San Luis Rey River downstream of Lake Henshaw (Cleveland National Forest, Rey River Ranch, Vista Irrigation District). Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego, San Luis Rey River, biota, birds, endangered species, All tags... habitats, population and community ecology, riparian habitats, survey, survival, Fewer tags 1 2 »