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Understanding age and growth are important for fisheries science and management; however, age data are not routinely collected for many populations. We propose and test a method of borrowing age–length data across increasingly broader spatiotemporal levels to create a hierarchical age–length key (HALK). We assessed this method by comparing growth and mortality metrics to those estimated from lake–year age–length keys ages using seven common freshwater fish species across the upper Midwestern United States. Levels used for data borrowing began most specifically by borrowing within lake across time and increased in breadth to include data within the Hydrologic Unit Code (HUC) 10 watershed, HUC8 watershed, Level III...
Categories: Publication; Types: Citation
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Daily lake surface temperatures estimates for 185,549 lakes across the contiguous United States from 1980 to 2020 generated using an entity-aware long short-term memory deep learning model. In-situ measurements used for model training and evaluation are from 12,227 lakes and are included as well as daily meteorological conditions and lake properties. Median per-lake estimated error found through cross validation on lakes with in-situ surface temperature observations was 1.24 °C. The generated dataset will be beneficial for a wide range of applications including estimations of thermal habitats and the impacts of climate change on inland lakes.
Categories: Data; Tags: AL, AR, AZ, Alabama, Aquatic Biology, All tags...
Our research focused on the conservation of ecologically and culturally important species – snowshoe hare and ruffed grouse – in relation to a changing winter climate. Our research continued a highly productive, long-term study at the Sandhill Wildlife Area, a state-owned property dedicated to wildlife conservation and actively managed for timber harvest. By conducting our research within an actively managed landscape, we identified those habitats in which climate-vulnerable species are capable of persisting. Our overarching hypothesis was that recent climate change (loss of snow cover) is exerting strong directional selection and inducing rapid phenotypic change on important prey species of northern forests, but...
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Fish data on six species (black crappie (Pomoxis nigromaculatus), bluegill (Lepomis macrochirus), largemouth bass (Micropterus salmoides), northern pike (Esox lucius), walleye (Sander vitreus), and yellow perch (perca flavescens)) caught in gill nets and trap nets between 2000 and 2019 during Minnesota Department of Natural Resources (MNDNR) fisheries surveys done in the months of June through September. Fish catch and effort (number of nets set overnight) comes from over 1,000 Minnesota lakes. In addition to fisheries data, we included additional information concerning lake characteristics, predicted water temperature, and watershed land use. Lake area and maximum depth were obtained from MNDNR public databases....
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Many animal species have unique characteristics that allow them to survive during winter. For example, the snowshoe hare changes its fur color from brown to white to camouflage better in winter months, and the ruffed grouse roosts under the snow to stay warm and hidden in winter. These winter-adapted species, however, are facing new challenges as climate change is resulting in shorter winters and rapid declines in snowpack. Shorter winters pose a significant threat to winter-adapted species that are used to living in, under, or on top of a protective blanket of snow. Wildlife managers are tasked with conserving these species, yet studies understanding how specific management actions can enhance species' ability...
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With shortening snow season duration, snowshoe hares are experiencing increased camouflage mismatch with their environment reducing survival. Phenological variation of hare molt at regional scales could facilitate local adaptation in the face of climate change, but the level of variation, especially along the southern range boundary, is unknown. Using a network of trail cameras and historical museum specimens, we (1) developed contemporary and historical molt phenology curves in the Upper Great Lakes region, USA.
Poikilothermic animals comprise most species on Earth and are especially sensitive to changes in environmental temperatures. Species conservation in a changing climate relies upon predictions of species responses to future conditions, yet predicting species responses to climate change when temperatures exceed the bounds of observed data is fraught with challenges. We present a physiologically guided abundance (PGA) model that combines observations of species abundance and environmental conditions with laboratory-derived data on the physiological response of poikilotherms to temperature to predict species geographical distributions and abundance in response to climate change. The model incorporates uncertainty in...
Categories: Publication; Types: Citation
Color polymorphism is an adaptive strategy in which a species exhibits multiple color phenotypes in a population. Often, phenotypes are variably suited to different environmental conditions which may buffer the population against variable conditions. Modern climate change is creating novel selective pressures for many species, especially in winter habitats. Few studies have quantified the benefits of polymorphism for allowing species to cope with climate-induced environmental change, particularly for species with more cryptic differences between morphs. We investigated how color polymorphism mediates selective pressures in ruffed grouse Bonasa umbellus, a winter-adapted bird species of North American forests. Ruffed...
Categories: Publication; Types: Citation
Estimating relative abundance is critical for informing conservation and management efforts and for making inferences about the effects of environmental change on populations. Freshwater fisheries span large geographic regions, occupy diverse habitats and consist of varying species assemblages. Monitoring schemes used to sample these diverse populations often result in populations being sampled at different times and under different environmental conditions. Varying sampling conditions can bias estimates of abundance when compared across time, location and species, and properly accounting for these biases is critical for making inferences. We develop a joint species distribution model (JSDM) that accounts for varying...
Categories: Publication; Types: Citation
Climate change and land use change have been shown to influence lake temperatures and water clarity in different ways. To better understand the diversity of lake responses to climate change and give managers tools to manage individual lakes, we focused on improving prediction accuracy for daily water temperature profiles and optical habitat in 881 lakes in Minnesota during 1980-2018. The data are organized into these items: This research was funded by the Department of the Interior Northeast and North Central Climate Adaptation Science Centers, a Midwest Glacial Lakes Fish Habitat Partnership grant through F&WS Access to computing facilities was provided by USGS Advanced Research Computing, USGS Yeti Supercomputer...
Many real-world scientific processes are governed by complex non-linear dynamic systems that can be represented by differential equations. Recently, there has been an increased interest in learning, or discovering, the forms of the equations driving these complex non-linear dynamic systems using data-driven approaches. In this paper, we review the current literature on data-driven discovery for dynamic systems. We provide a categorisation to the different approaches for data-driven discovery and a unified mathematical framework to show the relationship between the approaches. Importantly, we discuss the role of statistics in the data-driven discovery field, describe a possible approach by which the problem can be...
Categories: Publication; Types: Citation
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Fish catch and effort data for three species caught in gill nets and trap nets between 1988 and 2019 as part of Minnesota Department of Natural Resources (MNDNR) fisheries surveys conducted during the summer and early fall are included from over 1,300 Minnesota lakes. The three fish species included are: bluegill (Lepomis marochirus) a warm-water adapted species, yellow perch (Perca flavescens) a cool-water adapted species, and cisco (Coregonus artedi) a cold-water adapted species. Additional data concerning lake characteristics and surrounding land cover were also included. Mean July lake surface temperature was calculated using simulated daily water temperatures. Watershed land use including agricultural, barren,...
The snowshoe hare (Lepus americanus) possesses a broad suite of adaptations to winter, including a seasonal coat color molt. Recently, climate change has been implicated in the range contraction of snowshoe hares along the southern range boundary. With shortening snow season duration, snowshoe hares are experiencing increased camouflage mismatch with their environment reducing survival. Phenological variation of hare molt at regional scales could facilitate local adaptation in the face of climate change, but the level of variation, especially along the southern range boundary, is unknown. Using a network of trail cameras and historical museum specimens, we (1) developed contemporary and historical molt phenology...
Categories: Publication; Types: Citation
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Climate change affects the abundance and distribution of species worldwide. Poikilothermic animals comprise most species on Earth and are extremely sensitive to changes in environmental temperatures. Predicting species responses to climate change when temperatures exceed the bounds of observed data is fraught with challenges. Here, we combine empirical observations of species abundance and environmental conditions across the landscape with laboratory-derived data on the physiological response of poikilotherms to changes in temperature to predict species geographical distributions and abundance in response to climate change. We show that predicted changes in distributions, local extinction, and abundance of cold,...
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The data comprise observations of 12 species of fish from Minnesota Department of Natural Resources (DNR) fish survey data. Surveys were conducted between 1968 & 2022 generally for the purposes of assessing fishery statuses in inland lakes. The species in these data represent only a subset of all species present in DNR surveys, and were selected for our study because of relevance to stakeholders and relative vulnerability to the gears used to survey the populations.


map background search result map search result map Approved DataSets Managing and Promoting the Resiliency of Winter-Adapted Species to Climate Change Data release: Walleye Thermal Optical Habitat Area (TOHA) of selected Minnesota lakes Daily surface temperature predictions for 185,549 U.S. lakes with associated observations and meteorological conditions (1980-2020) Data In Support Of Accounting For Spatio-Temporal Variation In Catachability In Joint Species Distribution Models Data in Support of Predicting Climate Change Impacts on Poikilotherms Using Physiologically Guided Species Abundance Models Code for Predicting climate change impacts on poikilotherms using physiologically guided species abundance models Snowshoe Hare Molt Characteristics at Study Sites from Contemporary and Historical Museum Specimens Across Wisconsin, Michigan and Minnesota from 1898 - 2007 Observations of 12 fish species from Minnesota Department of Natural Resources fish surveys of inland lakes between 1968-2022 Data release: Walleye Thermal Optical Habitat Area (TOHA) of selected Minnesota lakes Observations of 12 fish species from Minnesota Department of Natural Resources fish surveys of inland lakes between 1968-2022 Managing and Promoting the Resiliency of Winter-Adapted Species to Climate Change Data In Support Of Accounting For Spatio-Temporal Variation In Catachability In Joint Species Distribution Models Data in Support of Predicting Climate Change Impacts on Poikilotherms Using Physiologically Guided Species Abundance Models Code for Predicting climate change impacts on poikilotherms using physiologically guided species abundance models Snowshoe Hare Molt Characteristics at Study Sites from Contemporary and Historical Museum Specimens Across Wisconsin, Michigan and Minnesota from 1898 - 2007 Daily surface temperature predictions for 185,549 U.S. lakes with associated observations and meteorological conditions (1980-2020)