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Reproductive ecology data for female Agassiz's desert tortoises (Gopherus agassizii) in Joshua Tree National Park, USA These data were compiled to evaluate the reproductive ecology of Agassiz's desert tortoises (Gopherus agassizzi) in the Sonoran Desert of California using two populations within Joshua Tree National Park, including five reproductive seasons that spanned 20 years (1997-1999, 2015-2016). Compared to their conspecifics inhabiting the Mojave Desert, the reproductive ecology of G. agassizii in the Sonoran Desert is understudied. Climatic variation between the two deserts can affect reproductive ecology, including fecundity and clutch phenology. Mature female tortoises (straight-line carapace length ≥ 20 cm) outfitted with radiotransmitters were located and X-radiographed approximately every 10-14 days during the reproductive... Categories: Data; Tags: Agassiz's desert tortoise, California, Ecology, Geography, Gopherus agassizii, All tags... Information Sciences, Joshua Tree National Park, Sonoran Desert, USGS Science Data Catalog (SDC), Wildlife Biology, X-radiography, X-ray egg width, biota, climatic variation, clutch number, clutch phenology, clutch size, ecology, egg production, egg size, fecundity, field monitoring, field sampling, nests, reproductive ecology, size, tortoise, Fewer tags Data collected in 2008-2014 to assess nearshore subtidal community responses to increased sediment load during removal of the Elwha River dams, Washington State, USA Data are time series of substrate grain size, remotely sensed water column turbidity, and measures of abundance (e.g., density, percent cover) of the nearshore subtidal (3-17 m depth) benthic community (vegetation, invertebrates, and fish) collected before (2008-2011) and during dam removal (2012-2014). Categories: Data; Tags: Aquatic Biology, Benthos, Botany, Clallam County, Ecology, All tags... Elwha River, Geomorphology, Habitat alteration, Land Use Change, Marine Geology, Marine nearshore subtidal, Remote Sensing, Species diversity, Strait of Juan de Fuca, USGS Science Data Catalog (SDC), Water Quality, Fewer tags Vertical chemical profiles collected across haloclines in the water column of the Ox Bel Ha cave network within the coastal aquifer of the Yucatan Peninsula in January 2015 and January 2016 Natural cave passages penetrating a coastal aquifer in the Yucatan Peninsula (Mexico) were accessed to test the hypothesis that chemoclines associated with salinity gradients (haloclines) within the flooded cave networks of the karst subterranean estuary are sites of methane oxidation. Two field trips were carried out to the fully-submerged cave system located 6.6 km inland from the coastline in January 2015 and January 2016. Vertical chemical profiles across the water column haloclines were obtained using the OctoPiPi (OPP), a high-resolution water sampler built by the U.S. Geological Survey (USGS). The sampling efforts resulted in cm-scale profiles of major ions (e.g., chloride and sulfate), as well as concentrations... Categories: Data; Tags: Cenote Bang, Ecology, Geochemistry, Hydrology, Mexico, All tags... Ox Bel Ha Cave System, Quintana Roo, U.S. Geological Survey, USGS, Yucatan Peninsula, anchialine ecosystem, aquatic ecosystem, biogeochemical cycling, biogeochemical cycling, carbon cycling, carbon isotope analysis, cave, cenote, chemical records, coastal aquifer, coastal ecosystems, ecosystem function, environment, environment, estuarine ecosystems, estuarine mixing, field inventory and monitoring, freshwater ecosystems, geochemical data, geochemistry, groundwater, hydrogeology, hydrologic records, hydrology, inland waters, inlandWaters, karst, salinity, subterranean estuary, Fewer tags Wetland birds of the Prairie Pothole Region of North and South Dakota, 1995-1997, data release The data set consists of data collected in 1995, 1996, and 1997 in wetlands in the Prairie Pothole Region of North Dakota and South Dakota. The data were summarized and used in the analysis for two publications in peer-reviewed journals. The data consists of one data set that includes bird abundance and richness data, wetland class (temporary, seasonal, semipermanent, permanent, alkali), and wetland type (private or federal). In conjunction with surveys of wetland birds, the following wetland variables also were recorded: wetland size, date, local-level habitat variables (percent coverage of open water, emergent vegetation, wet meadow, and shoreline/mudflat), and landscape-level habitat variables (percent cover... Categories: Data; Tags: Aquatic Biology, Aquatic birds, Arrowwood Wetland Management District, Audubon Wetland Management District, Biodiversity, All tags... Chase Lake Wetland Management District, Des Lacs Wetland Management District, Devils Lake Wetland Management District, Ecology, Environmental restoration, Huron Wetland Management District, J. Clark Salyer Wetland Management District, Kulm Wetland Management District, Lake Andes Wetland Management District, Land Use Change, Land ownership, Landscape, Long Lake Wetland Management District, Lostwood Wetland Management District, Madison Wetland Management District, North Dakota, Prairie Pothole Region, Sand Lake Wetland Management District, South Dakota, Species diversity, Tewaukon Wetland Management District, USGS Science Data Catalog (SDC), Valley City Wetland Management District, Waubay Wetland Management District, Wetlands, Wildlife Biology, biodiversity, biota, birds, landscape factors, local factors, wetland birds, wetland classification, wetland ecosystems, Fewer tags Flea abundance and body condition data for black-tailed prairie dogs on sites treated and not treated with “FipBit” fipronil pellets, South Dakota, 2018-2020 Flea abundance and body condition data for black-tailed prairie dogs on sites treated and not treated with “FipBit” fipronil pellets. We sampled prairie dogs at Conata Basin, Buffalo Gap National Grassland, and Badlands National Park, South Dakota, USA. We sampled fleas from live-trapped prairie dogs during June–October 2018, May–October 2019, and July-August 2020. Prairie dogs were sampled before and after FipBit treatments. We anesthetized each prairie dog with isoflurane and combed it thoroughly for 30 seconds to dislodge fleas, which fell into a plastic bin. Fleas were counted and allowed to recover from anesthesia and placed back on prairie dogs, to minimize any removal effect. We weighed prairie dogs with... Categories: Data; Tags: Cynomys, Ecology, Environmental Health, Flea, Plague, All tags... Prairie dog, USGS Science Data Catalog (SDC), Wildlife Biology, Wildlife Disease, Yersinia pestis, biota, disease vectors, Fewer tags Disturbance characteristics, vegetation and biocrust cover from the northern Great Basin (USA) 2012-2013 Fifteen fires from the Chronosequence dataset (see Knutson et al. 2014) were visited in 2012 and 2013 and surveyed for cover of lichens and mosses. Fires were selected to cover the range of average precipitation for each of three water years following fire, fire severity, time since fire, season of ignition, total acres burned and grazing intensity. Cattle grazing was characterized by distance from water sources for cattle, cow dung density counts and Animal Unit Months from the Rangeland Administration System of the Bureau of Land Management. Fire was characterized by whether or not a site burned, time since fire, the area burned, and an estimated amount of shrub cover consumed by the fire as compared to seemingly... Categories: Data; Tags: Botany, Ecology, Great Basin, Idaho, Land Use Change, All tags... Nevada, Oregon, Soil Sciences, USGS Science Data Catalog (SDC), Utah, biota, botany, community ecology, environment, lichens, mosses, vascular plants, Fewer tags Promoting Change in Common Tern (Sterna hirundo) Nest Site Selection to Minimize Construction Related Disturbance These data describe the status of eggs in nests which had a foster egg added to them as part of an effort to relocate a common tern colony on Poplar Island. One data file (McGowanEtAl2018_FosterNestData_Data.csv) contains the data regarding the observations, while one definitions file (McGowanEtAl2018_FosterNestData_Definitions.csv) details the data. Categories: Data; Tags: Birds, Chesapeake Bay, Chesapeake Bay, Ecology, Species Biology, All tags... USGS Science Data Catalog (SDC), Wildlife Biology, Wildlife Biology, nesting behavior, Fewer tags Time and Distance of Detection and Stop Locations along North American Breeding Bird Survey routes within the Gulf Coastal Plains & Ozarks Landscape Conservation Cooperative. These data identify the time (0-1 min, 1-2 min,or 2-3 min) and distance (≤50 meters, >50 meters) category when birds were first detected during 3-minutes point counts at stop locations associated with North American Breeding Bird Survey routes or route equivalents that were surveyed on dates between 2009 and 2016 and provide point location coordinates of stop locations along North American Breeding Bird Survey routes or route equivalents within (or within 60 miles) the Gulf Coastal Plains & Ozarks Landscape Conservation Cooperative boundary. Categories: Data; Tags: Alabama, Arkansas, Birds, Central Hardwoods, East Gulf Coastal Plain, All tags... Ecology, Geographic Information Systems, Geospatial Analysis, Gulf Coastal Plain and Ozarks, Kentucky, Louisiana, Mississippi, Mississippi Alluvial Valley, Missouri, North American Breeding Bird Survey, Oklahoma, Statistical Analysis, Tennessee, Texas, USGS Science Data Catalog (SDC), West Gulf Coastal Plain, Wildlife Biology, birds, field monitoring stations, location, statistical surveying, Fewer tags Survey of viral hemorrhagic septicemia virus in Pacific herring throughout the North Pacific Ocean Throughout a 20-year biosurveillance period, viral hemorrhagic septicemia virus was isolated in low titers from only 6 / 7,355 opportunistically sampled adult Pacific herring, reflecting the typical endemic phase of the disease when the virus persists covertly. However, more focused surveillance efforts identified the presence of disease hot spots occurring among juvenile life history stages from certain nearshore habitats. These outbreaks sometimes recurred annually in the same temporal and spatial patterns and were characterized by infection prevalence as high as 96%. Longitudinal sampling indicated that some epizootics were relatively transient, represented by positive samples on a single sampling date, and others... Categories: Data; Tags: Cook Inlet, Ecology, Ketchican, Prince William Sound, Puget Sound, All tags... Sitka Sound, USGS Science Data Catalog (SDC), Wildlife Disease, viruses, Fewer tags Pre-fire satellite derived and field calculated functional cover across Great Basin megafires Data includes satellite derived pre-fire functional group cover of annual and perennial herbaceous, shrubs, bareground and litter across four rangeland megafires in the Western US, as well as field estimated invasive annual grass measurements from the 2nd to 3rd years post-fire. Additional landscape and restoration treatment covariates hypothesized to influence post-fire invasive annual grass cover are included. Categories: Data; Tags: Artemisia tridentata, Botany, Bromus tectorum, Ecology, Great Basin, All tags... Idaho, Land Use Change, Nevada, Oregon, Poa secunda, Soil Sciences, USGS Science Data Catalog (SDC), biota, community ecology, ecology, environment, land use and land cover, lichens, mosses, vegetation, Fewer tags Attribution of benthic macroinvertebrate sampling data to NHDPlus V2 and NHDPlus HR catchments within the Chesapeake Bay Watershed This data release links benthic macroinvertebrate sites to both the NHDPlus Version 2 and NHDPlus High Resolution Region 02 networks, hereafter referred to as V2 and HR, using the hydrolink methodology. Linked benthic macroinvertebrate sites are those included in the Chesapeake Bay Basin-wide Index of Biotic Integrity (Chessie BIBI) developed by the Interstate Commission on the Potomac River Basin (ICPRB) and available from the Chesapeake Bay Program (https://datahub.chesapeakebay.net/LivingResources). The data set contains a unique sample identifier created by ICPRB, survey program, coordinates of sample, linked V2 COMID and HR Permanent Identifier, and information regarding uncertainty in the attribution. We strongly... Categories: Data; Tags: Aquatic Biology, District of Columbia (national district), Ecology, Hydrology, Maryland (state), All tags... New York (state), Pennsylvania (state), USGS Science Data Catalog (SDC), Virginia (state), West Virginia (state), aquatic biology, aquatic ecosystems, ecology, freshwater ecosystems, hydrology, macroinvertebrates, Fewer tags Various Lake Powell data used for predicting smallmouth bass entrainment rates and population growth based on thermal suitability below and downstream of Glen Canyon Dam These data were compiled to create models that estimate entrainment rates and population growth rates of smallmouth bass below Glen Canyon Dam. Objective(s) of our study were to predict smallmouth bass entrainment rates and population growth under different future scenarios of Lake Powell elevations and management. These data represent parameters needed for associated models and data needed to produce figures. These data were collected from publicly available online sources including published papers and federal government datasets. These data were assembled by researchers from U.S. Geological Survey, Utah State University, Colorado State University, U.S. Fish and Wildlife Service. These data can be used to run... Categories: Data; Tags: Aquatic Biology, Arizona, Climatology, Colorado River, Diamond Creek, All tags... Ecology, Geography, Glen Canyon, Glen Canyon Dam, Global Horizon Irradiance, Grand Canyon, Hydrology, Information Sciences, Lake Powell, Lees Ferry, Little Colorado River, Page, Page Airport, USGS Science Data Catalog (SDC), Utah, Williams, adaptive management, age class, air temperature, area, bathymetry, climatologyMeteorologyAtmosphere, data release, depth suitability, ecological processes, elevation, entrainment rates, environment, evaporation, field inventory and monitoring, inflow projections, inlandWaters, mean observed lengths, modeling, observed daily depths, outflow projections, population growth, precipitation (atmospheric), reproduction, reservoir water quality model CEQUAL-W2, smallmouth bass, solar, study areas, surface water (non-marine), surface water quality, temperature profiles, thermal suitability, water depths, water temperature, Fewer tags Data on Utah prairie dog body condition and reproductive success, Awapa Plateau, Utah, USA, 2013-2016 Data on body condition and reproduction of Utah prairie dogs at 5 colonies on the Awapa Plateau, Utah, USA, June-August 2013-2016. Utah prairie dogs were live-trapped and sampled on 5 colonies. We recorded the age (juvenile/adult) and mass (nearest 5 grams) of each prairie dog and marked its ears and body with metal tags and passive integrated transponders, respectively, for permanent identification. We measured each prairie dog's right hind foot length (nearest millimeter). We indexed each adult prairie dog's body condition as the ratio between its mass and hind-foot length. Prairie dogs were allowed to recover from anesthesia and released at their trapping locations. We indexed prairie dog reproduction, by colony... Categories: Data; Tags: Cynomys, Ecology, Prairie dog, USGS Science Data Catalog (SDC), Utah, All tags... Wildlife Biology, Wildlife Disease, biota, capturing (animals), population dynamics, Fewer tags Data on soil denitrification potential and physico-chemical characteristics of tidal freshwater forested wetlands in Virginia Denitrification measurements and ecosystem attributes in hummock-hollow microtopography of tidal freshwater forested wetlands along longitudinal riverine positions (upper, middle, and lower tidal river sites, and nearby upstream nontidal forested floodplains) of the adjoining Pamunkey and Mattaponi Rivers, Virginia. Categories: Data; Tags: Ecology, Forested Wetland, Geochemistry, Geomorphology, Mattaponi, All tags... Pamunkey, Riverine Estuary, Soil Sciences, USGS Science Data Catalog (SDC), Virginia, Water Quality, environment, nitrogen, Fewer tags Shale gas data used in development of the Disturbance Intensity Index for the Pennsylvania portion of the Upper Susquehanna River basin in Maloney et al. 2018 Data on 17 metrics of shale gas development in the Pennsylvania portion of the Upper Susquehanna River basin that was collated from a variety of sources and summarized at the upstream catchment scale. Data were also standardized by upstream area and transformed into rank scores based on metric distribution and then summarized into a Disturbance Intensity Index (DII). See Maloney et al. 2018 for detailed descriptions of each data sets and limitations of data. (Maloney, K. O., J. A. Young, S. P. Faulkner, A. Hailegiorgis, E. T. Slonecker, and L. E. Milheim. 2018. A detailed risk assessment of shale gas development on headwater streams in the Pennsylvania portion of the Upper Susquehanna River Basin, U.S.A. Science... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Ecology, Pennsylvania portion of the Upper Susquehanna River basin, USGS Science Data Catalog (SDC), biota, environment, All tags... inlandWaters, Fewer tags Distribution Models Predicting Groundwater Influenced Ecosystems in the Northeastern United States Globally, groundwater dependent ecosystems (GDEs) are increasingly vulnerable to groundwater extraction and land use practices. Groundwater supports these ecosystems by providing inflow, which can maintain water levels, water temperature, and chemistry necessary to sustain the biodiversity that they support. Many aquatic systems receive groundwater as a portion of base flow, and in some systems (e.g., springs, seeps, fens) the connection with groundwater is significant and important to the system’s integrity and persistence. Groundwater management decisions for human use may not consider ecological effects of those actions on GDEs, which rely on groundwater to maintain ecological function. This disconnect between... Categories: Data; Types: Downloadable, GeoTIFF, Map Service, Raster; Tags: Ecology, Hydrology, Land Use Change, New England, Remote Sensing, All tags... USGS Science Data Catalog (SDC), Water Resources, Wildlife Biology, groundwater, groundwater influenced ecosystems, imageryBaseMapsEarthCover, modeling, northeastern United States, northeastern states, prediction, Fewer tags Captures and Trapping Effort for Deer Mice (Peromyscus sonoriensis) at Point Reyes National Seashore, California, USA from 2021 to 2022 These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type. Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service, Shapefile; Tags: California, Ecology, Marin County, Point Reyes National Seashore, USGS Science Data Catalog (SDC), All tags... Wildlife Biology, biota, ecology, mammals, modeling, population and community ecology, restoration, Fewer tags Data on dietary preference by brown treesnakes on Guam These data address experimental evaluations of dietary preference by captive brown treesnakes on Guam. Snakes were collected from the wild in areas with birds present and in areas without birds present 2018–2019. Snakes were then run through preference trials during which they were offered first live lures (mouse and finch) in snake traps on opposite sides of the arena. On the second night, snakes were offered dead carrion (baits) of each prey type (mouse, chicken chick) equal to 30% of their mass. Choices were monitored overnight using game cameras and then transcribed the following day. Individuals were classified as BIRD or NOBIRD snakes based on whether they had birds in their gut contents at the time of capture.... Categories: Data; Tags: Ecology, Guam, Guam National Wildlife Refuge, Preference, USGS Science Data Catalog (SDC), All tags... environment, Fewer tags Hawaii Volcanoes National Park Plant Trait, Percent Cover, and Environmental Data 2014 This data release includes data and metadata on 1) the coverage and composition of plants 2) species specific plant traits 3) sampling locations and 4) environmental data. All sites were within Hawaii Volcanoes National Park on Hawaii Island. Plant cover data were obtained from National Park Service Inventory and Monitoring Program. Plant trait data was collected for these plots in 2014. This study aims to evaluate how traits of native and exotic plant species change along environmental gradients and what this suggests for plant competition and invasion. Categories: Data; Tags: Ecology, Hawaii, Hawaii Volcanoes National Park, USGS Science Data Catalog (SDC), botany, All tags... bryophyte, ecology, forest resources, forest restoration, invasive species, plant ecology, seedling recruitment, tropical forest dynamics, Fewer tags Upper Skagit River intrinsic potential results We assessed habitat suitability for salmonids across selected tributaries upstream from three hydroelectric dams on the upper Skagit River in Whatcom County, northern Washington. We used NetMap, a commercial toolset within the ArcMap geographic information system (GIS), to analyze stream attributes based upon a synthetic stream channel network derived from digital elevation models. The GIS-derived stream attributes—including gradient, bankfull width, valley width index, elevation, and stream flow—allowed us to examine the spatial distribution and relative quality of spawning and rearing habitat for salmonids based on existing intrinsic potential (IP) models. As a first step, we created maps of potential anadromous... Categories: Data; Tags: Ecology, North Cascades National Park, USGS Science Data Catalog (SDC), biota, habitat suitability indices 1 2 3 4 5 ... 39 »