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Deep-sea corals can create a highly complex, three-dimensional structure that facilitates sediment accumulation and influences adjacent sediment environments through altered hydrodynamic regimes. Infaunal communities adjacent to different coral types, including reef-building scleractinian corals and individual colonies of octocorals, are known to differ from background non-coral soft-sediment communities, often exhibiting higher macrofaunal densities and distinct community structure. However, the coral types have different morphologies, which may modify the adjacent sediment communities in discrete ways. Here we address two main questions: 1) how infaunal communities adjacent to deep-sea corals and their associated...
This dataset contains mercury concentrations and locations of wintering red-legged kittiwakes in the western subartic Pacific Ocean. These data support the following publication: Fleishman, AB, RA Orben, N Kokubun, A Will, R Paredes, JT Ackerman, A Takahashi, AS Kitaysky, and SA Shaffer. 2019. Wintering in the Western Subarctic Pacific increases mercury contamination of red-legged kittiwakes. Environmental Science and Technology, in press.
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These data have been collected as part of a cooperative project in between the U.S. Geological Survey, Colorado Springs Utilities, and Colorado Springs City Engineering. This project began in 2005 and has collected macroinvertebrate samples from Fountain Creek and its tributaries to monitor the biological condition of this watershed. Provided in this data release are Multimetric Index (MMI) values of aquatic macroinvertebrate assemblages using four different sampling methods. There are two subsets of these data included: (1) MMI values of macroinvertebrate data collected from 2010 to 2012 at 15 sites as part of an invertebrate sample method comparison Scientific Investigations Report (SIR) titled “Comparability...
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Effective monitoring and prediction of flood and drought events requires an improved understanding of how and why surface-water expansion and contraction in response to climate varies across space. This paper sought to (1) quantify how interannual patterns of surface-water expansion and contraction vary spatially across the Prairie Pothole Region (PPR) and adjacent Northern Prairie (NP) in the United States, and (2) explore how landscape characteristics influence the relationship between climate inputs and surface-water dynamics. Due to differences in glacial history, the PPR and NP show distinct patterns in regards to drainage development and wetland density, together providing a diversity of conditions to examine...
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Groundwater quality data were collected in 5,000 wells between 1988-2001 by the National Water-Quality Assessment Project. About 1,500 of these wells were sampled again between 2002-2012 to evaluate decadal changes in groundwater quality. Monitoring wells, domestic supply wells, and some public supply wells were included in this study. All water was collected prior to treatment. Groundwater samples used to evaluate decadal change were collected from networks of wells with similar characteristics. Some networks, consisting of domestic or public supply wells, were used to assess changes in the quality of groundwater used for drinking water supply. Other networks, consisting of monitoring wells, assessed changes in...
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Geospatial data were developed to characterize pre-fire biomass, burn severity, and biomass consumed for the Black Dragon Fire that burned in northern China in 1987. Pre-fire aboveground tree biomass (Mh/ha) raster data were derived by relating plot-level forest inventory data with pre-fire Landsat imagery from 1986 and 1987. Biomass data were generated for individual species: Dahurian larch (Larix gmelinii Rupr. Kuzen), white birch (Betula platyphylla Suk), aspen (Populus davidiana Dode and Populus suaveolens Fischer), and Mongolian Scots pine (Pinus sylvestris var. mongolica Litvinov). A raster layer of total aboveground tree biomass was also generated. Burned area was manually delineated using the normalized...
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This study uses growth in vegetation during the monsoon season measured from LANDSAT imagery as a proxy for measured rainfall. NDVI values from 26 years of pre- and post-monsoon season Landsat imagery were derived across Yuma Proving Ground (YPG) in southwestern Arizona, USA. The LANDSAT imagery (1986-2011) was downloaded from USGS’s GlobeVis website (http://glovis.usgs.gov/). Change in NDVI was calculated within a set of 2,843 Riparian Area Polygons (RAPs) up to 1 km in length defined in ESRI ArcMap 10.2.
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The spring 2017 mainland sea otter count began on April 30, and although the shore-based counts were completed by May 12, 2017, the aerial counts were not completed until July 12, 2017. Overall viewing conditions this year were good, although not as good as conditions experienced during the 2016 spring census (View Score 2.4 versus 3.1, where 0=poor, 1=fair, 2=good, 3=very good, and 4=excellent). The surface canopies of kelp (Macrocystis sp.) were considered by most participants to be considerably below normal for this time of year in most areas of the mainland range. Sea otters along the mainland coast were surveyed from Pillar Point in San Mateo County in the north to Rincon Point in the south at the Santa Barbara/Ventura...
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Wetland restoration efforts conducted by the Coastal Wetlands Planning, Protection and Restoration Act (CWPPRA) in Louisiana rely on monitoring efforts to determine the efficacy of these efforts. The Coastwide Reference Monitoring System (CRMS) was developed to assist in a multiple-reference approach that uses aspects of hydrogeomorphic functional assessments and probabilistic sampling for monitoring. The CRMS program includes a suite of approximately 390 sites that encompass the range of hydrological and ecological conditions for each stratum. As part of CRMS, land and water classifications are created from Digital Orthophoto Quarter Quadrangles (DOQQs) approximately every three years at all CRMS sites. A DOQQ...
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The U.S. Geological Survey, Western Ecological Research Center (USGS-WERC) was requested by the Bureau of Ocean Energy Management (BOEM) to create a database for marine birds of the California Current System (CCS) that would allow quantification and species ranking regarding vulnerability to offshore wind energy infrastructure (OWEI). This was needed so that resource managers could evaluate potential impacts associated with siting and construction of OWEI within the California Current System section of the Pacific Offshore Continental Shelf, including California, Oregon, and Washington. Along with its accompanying Open File Report (OFR), this comprehensive database can be used (and modified or updated) to quantify...
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To improve our understanding of health and immune function in tortoises, we evaluated both standard blood diagnostic (body condition, hematologic, plasma biochemistry values, trace elements, plasma proteins, vitamin A levels) and gene transcription profiles in 21 adult tortoises (11 clinically abnormal; 10 clinically normal) from Clark County, NV, USA. Necropsy and histology evaluations from clinically abnormal tortoises revealed multiple physiological complications, with moderate to severe rhinitis or pneumonia being the primary cause of morbidity in all but one of the examined animals. Improved methods for health assessments are an important element of monitoring tortoise population recovery and can support the...
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This product consists of time-series calculations of anthropogenic characteristics derived for 16 data themes for multiple scales covering the conterminous United States. The characteristics are those which (a) have consistent data sources, and (b) have the potential to affect the water quality of streams and rivers. All 16 data themes are provided for Hydrologic Unit Code level-10 (HUC-10) boundaries (n = 15,458). Additionally, measures of land use and imperviousness are provided for U.S. Environmental Protection Agency (USEPA) Level 4 ecoregions (n = 967) and for U.S. counties (n = 3,109). The data may be scaled up to broader areas; that is, HUC-10 data may be scaled up to HUC-8, 6, 4, or HUC-2 areas, Level 4...
Carbon dioxide (CO2) is under consideration as a chemical fish deterrent at pinch points in rivers (e.g., inside locks) to reduce unwanted fish passage. This study evaluated the behavioral responses of invasive round goby (Neogobius melanostomus) to dissolved CO2 in laboratory tanks. The goal of this project was to quantify CO2 concentrations that modify round goby behavior. More specifically, avoidance behavior (voluntary response) and loss of equilibrium (involuntary response) were quantified across 5, 15, and 25°C water temperatures. These data can be used to inform future field testing of CO2 as an invasive fish deterrent. Spreadsheets include data that were used to evaluate the efficacy of carbon dioxide (CO2)...
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We assessed the resilience of wetlands to sea-level rise along a transitional gradient from tidal freshwater forested wetland (TFFW) to oligohaline marsh by measuring processes controlling wetland elevation. We identified fundamental differences in how resilience is maintained across wetland community types, which have important implications for management activities that aim to restore or conserve resilient systems.
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This data release contains coastal wetland synthesis products for the geographic region from Jamaica Bay to western Great South Bay, located in southeastern New York State. Metrics for resiliency, including unvegetated to vegetated ratio (UVVR), marsh elevation, and mean tidal range, are calculated for smaller units delineated from a Digital Elevation Model, providing the spatial variability of physical factors that influence wetland health. Through scientific efforts initiated with the Hurricane Sandy Science Plan, the U.S. Geological Survey has been expanding national assessment of coastal change hazards and forecast products to coastal wetlands with the intent of providing Federal, State, and local managers with...
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This dataset includes field data for fishes sampled using gill nets during daylight hours in the Northern Sacramento-San Joaquin Delta, California, USA. This data release includes all measured environmental parameters and fish taxa included in the analysis. First posted - August 19, 2019 (available from author) Revised - December 18, 2019 (version 1.1)
The table provides all fish collected using two different electrofishing methods at Illinois River sites in 2012 and 2013. Length and weights were taken on most species and gender was taken from Silver Carp. Fishes were categorized whether they were netters (caught by nets) or jumpers (jumped in the boat while sampling) and only netters were used in analyses. Large numbers of shad were collected in 2013 and an additional spreadsheet includes abundance data in an aggregated form for those sites. The data is not sensitive/classified and there are no legal restrictions on who may obtain or use the data.
(i) This dataset presents macroscopic and microscopic pathological findings and bacteriology of 178 tadpoles diagnosed with Severe Perkinsea Infections. (ii) Specimen were collected and submitted to the NWHC as part of mortality investigations and collection of specimen from apparently healthy populations as part of ongoing amphibian health monitoring. (iii) Necropsies and gross evaluation of carcasses were carried out under a dissecting microscope. (iv) Severe Perkinsea Infection was confirmed in each specimen by histological observation of pathological changes in tissues with presence of Perkinsea-like organisms in at least one organ, including brain, eyes, gastrointestinal tract, gills, heart, liver, lungs, kidney,...
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These data were compiled to evaluate the reproductive ecology of Agassiz's desert tortoises (Gopherus agassizzi) in the Sonoran Desert of California using two populations within Joshua Tree National Park, including five reproductive seasons that spanned 20 years (1997-1999, 2015-2016). Compared to their conspecifics inhabiting the Mojave Desert, the reproductive ecology of G. agassizii in the Sonoran Desert is understudied. Climatic variation between the two deserts can affect reproductive ecology, including fecundity and clutch phenology. Mature female tortoises (straight-line carapace length ≥ 20 cm) outfitted with radiotransmitters were located and X-radiographed approximately every 10-14 days during the reproductive...
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We collected detailed spatial data on the density and size distribution of intertidal snails as part of a broader effort to understand food webs in California estuaries. The survey area was Carpinteria Salt Marsh, California USA, which comprises 9 Ha tidal channels, 2 Ha salt flats, 17 Ha upland habitat, 6 Ha tidal pans, 52 Ha vegetated marsh, 2 Ha tidal flats. Using nearly 4,000 transects in potential snail habitat, we mapped snails throughout the estuary. Specifically, we systematically placed transects at intervals stratified within targeted habitat types: channels, pans, or marsh (or planar habitat that was mixed marsh and pan). At a quarter of the quadrats, we also estimated snail size-frequency distributions....
map background search result map search result map Mean of the Top Ten Percent of NDVI Values in the Yuma Proving Ground during Monsoon Season, 1986-2011 Elevation change along a coastal wetland landscape gradient from tidal freshwater forested wetland to oligohaline marsh in the Southeastern U.S.A. (2009-2014) data Distribution and mapping of the snail Cerithideopsis (Cerithidea) californica at Carpinteria Salt Marsh, California USA, June to August 2012 Coastwide Reference Monitoring System (CRMS) 2015 land-water classifications Data for calculating population, collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure (ver. 2.0, June 2017) Blood variable data for clinically normal and clinically abnormal Mojave Desert tortoises (Gopherus agassizii) in 2013 Data from Decadal Change in Groundwater Quality Web Site, 1988-2012 Annual California Sea Otter Census - 2017 Spring Census Summary Changes in anthropogenic influences on streams and rivers in the conterminous U.S. over the last 40 years, derived for 16 data themes Sediment macrofaunal composition, sediment grain size, and taxa functional traits of multiple deep-sea coral habitats in the Gulf of Mexico, 2009-2014 Reproductive ecology data for female Agassiz's desert tortoises (Gopherus agassizii) in Joshua Tree National Park, USA Data release for Wetlands inform how climate extremes influence surface water expansion and contraction Multimetric Index macroinvertebrate values from the Fountain Creek Basin, Colorado 2005 to 2016 Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data Abundance and Distribution of Fishes in the Northern Sacramento-San Joaquin Delta, California, 2017-2018 (ver. 1.1, December 2019) Coastal wetlands from Jamaica Bay to western Great South Bay, New York Pre-fire biomass, burn severity, biomass consumption, and fire perimeter data for the 1987 Black Dragon Fire in China Distribution and mapping of the snail Cerithideopsis (Cerithidea) californica at Carpinteria Salt Marsh, California USA, June to August 2012 Reproductive ecology data for female Agassiz's desert tortoises (Gopherus agassizii) in Joshua Tree National Park, USA Abundance and Distribution of Fishes in the Northern Sacramento-San Joaquin Delta, California, 2017-2018 (ver. 1.1, December 2019) Coastal wetlands from Jamaica Bay to western Great South Bay, New York Mean of the Top Ten Percent of NDVI Values in the Yuma Proving Ground during Monsoon Season, 1986-2011 Elevation change along a coastal wetland landscape gradient from tidal freshwater forested wetland to oligohaline marsh in the Southeastern U.S.A. (2009-2014) data Blood variable data for clinically normal and clinically abnormal Mojave Desert tortoises (Gopherus agassizii) in 2013 Pre-fire biomass, burn severity, biomass consumption, and fire perimeter data for the 1987 Black Dragon Fire in China Annual California Sea Otter Census - 2017 Spring Census Summary Sediment macrofaunal composition, sediment grain size, and taxa functional traits of multiple deep-sea coral habitats in the Gulf of Mexico, 2009-2014 Data release for Wetlands inform how climate extremes influence surface water expansion and contraction Data for calculating population, collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure (ver. 2.0, June 2017) Changes in anthropogenic influences on streams and rivers in the conterminous U.S. over the last 40 years, derived for 16 data themes Data from Decadal Change in Groundwater Quality Web Site, 1988-2012 Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data