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Annual California Sea Otter Census - 2017 Spring Census Summary The spring 2017 mainland sea otter count began on April 30, and although the shore-based counts were completed by May 12, 2017, the aerial counts were not completed until July 12, 2017. Overall viewing conditions this year were good, although not as good as conditions experienced during the 2016 spring census (View Score 2.4 versus 3.1, where 0=poor, 1=fair, 2=good, 3=very good, and 4=excellent). The surface canopies of kelp (Macrocystis sp.) were considered by most participants to be considerably below normal for this time of year in most areas of the mainland range. Sea otters along the mainland coast were surveyed from Pillar Point in San Mateo County in the north to Rincon Point in the south at the Santa Barbara/Ventura... Types: Citation; Tags: California, Central California Coastal, Coast, Southern California Coastal, USGS Science Data Catalog (SDC), All tags... aerial counts, biota, distribution, environment, ocean, range, sea otter census, sea otters, sea otters, shore counts, Fewer tags Data for calculating population, collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure (ver. 2.0, June 2017) The U.S. Geological Survey, Western Ecological Research Center (USGS-WERC) was requested by the Bureau of Ocean Energy Management (BOEM) to create a database for marine birds of the California Current System (CCS) that would allow quantification and species ranking regarding vulnerability to offshore wind energy infrastructure (OWEI). This was needed so that resource managers could evaluate potential impacts associated with siting and construction of OWEI within the California Current System section of the Pacific Offshore Continental Shelf, including California, Oregon, and Washington. Along with its accompanying Open File Report (OFR), this comprehensive database can be used (and modified or updated) to quantify... Categories: Data Release - Revised; Types: Citation, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Biota, California, California Current System, Environment, Ocean wind energy, All tags... Oregon, Pacific Outer Continental Shelf, Renewable energy, Seabirds, USGS Science Data Catalog (SDC), Vulnerability assessment, Washington, Fewer tags Coastal wetlands from Jamaica Bay to western Great South Bay, New York This data release contains coastal wetland synthesis products for the geographic region from Jamaica Bay to western Great South Bay, located in southeastern New York State. Metrics for resiliency, including unvegetated to vegetated ratio (UVVR), marsh elevation, and mean tidal range, are calculated for smaller units delineated from a Digital Elevation Model, providing the spatial variability of physical factors that influence wetland health. Through scientific efforts initiated with the Hurricane Sandy Science Plan, the U.S. Geological Survey has been expanding national assessment of coastal change hazards and forecast products to coastal wetlands with the intent of providing Federal, State, and local managers with... Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Atlantic Ocean, Environmental Health, Hydrology, Jamaica Bay, LTER, All tags... Long-Term Ecological Research, Marine Geology, Nassau County, New York, Queens County, South Oyster Bay, United States, Water Resources, coastal ecosystems, coastal processes, environment, estuary, geospatial datasets, inlandWaters, marsh health, oceans, salt marsh, vegetation, wetland ecosystems, wetland functions, Fewer tags Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data (i) This dataset presents macroscopic and microscopic pathological findings and bacteriology of 178 tadpoles diagnosed with Severe Perkinsea Infections. (ii) Specimen were collected and submitted to the NWHC as part of mortality investigations and collection of specimen from apparently healthy populations as part of ongoing amphibian health monitoring. (iii) Necropsies and gross evaluation of carcasses were carried out under a dissecting microscope. (iv) Severe Perkinsea Infection was confirmed in each specimen by histological observation of pathological changes in tissues with presence of Perkinsea-like organisms in at least one organ, including brain, eyes, gastrointestinal tract, gills, heart, liver, lungs, kidney,... Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: USGS Science Data Catalog (SDC), Unites States of Ameica, amphibian, biota, case definition, All tags... emerging infectious disease, histopathy, pathogenesis, pathogenic Perkinsea Clade, ranavirus, tadpoles, Fewer tags Reproductive ecology data for female Agassiz's desert tortoises (Gopherus agassizii) in Joshua Tree National Park, USA These data were compiled to evaluate the reproductive ecology of Agassiz's desert tortoises (Gopherus agassizzi) in the Sonoran Desert of California using two populations within Joshua Tree National Park, including five reproductive seasons that spanned 20 years (1997-1999, 2015-2016). Compared to their conspecifics inhabiting the Mojave Desert, the reproductive ecology of G. agassizii in the Sonoran Desert is understudied. Climatic variation between the two deserts can affect reproductive ecology, including fecundity and clutch phenology. Mature female tortoises (straight-line carapace length ≥ 20 cm) outfitted with radiotransmitters were located and X-radiographed approximately every 10-14 days during the reproductive... Categories: Data; Tags: Agassiz's desert tortoise, California, Ecology, Geography, Gopherus agassizii, All tags... Information Sciences, Joshua Tree National Park, Sonoran Desert, USGS Science Data Catalog (SDC), Wildlife Biology, X-radiography, X-ray egg width, biota, climatic variation, clutch number, clutch phenology, clutch size, ecology, egg production, egg size, fecundity, field monitoring, field sampling, nests, reproductive ecology, size, tortoise, Fewer tags Distribution and mapping of the snail Cerithideopsis (Cerithidea) californica at Carpinteria Salt Marsh, California USA, June to August 2012 We collected detailed spatial data on the density and size distribution of intertidal snails as part of a broader effort to understand food webs in California estuaries. The survey area was Carpinteria Salt Marsh, California USA, which comprises 9 Ha tidal channels, 2 Ha salt flats, 17 Ha upland habitat, 6 Ha tidal pans, 52 Ha vegetated marsh, 2 Ha tidal flats. Using nearly 4,000 transects in potential snail habitat, we mapped snails throughout the estuary. Specifically, we systematically placed transects at intervals stratified within targeted habitat types: channels, pans, or marsh (or planar habitat that was mixed marsh and pan). At a quarter of the quadrats, we also estimated snail size-frequency distributions.... Categories: Data; Tags: California, Carpinteria, Carpinteria Salt Marsh Reserve, Santa Barbara County, USGS Science Data Catalog (SDC), All tags... distribution, estuary, habitat, mapping, salt marsh, snail, trematodes, Fewer tags Dataset for Alaska Marine Fish Ecology Catalog This collection of GIS layers was prepared for the report Alaska Arctic Marine Fish Ecology Catalog (U.S. Geological Survey Scientific Investigations Report 2016–5038). The layers display geographic distribution and sampling locations for Arctic marine fish species in the region of United States sectors of the Chukchi and Beaufort Seas. Certain diadromous species (for example, Pacific salmon, char, and whitefishes) are treated as marine fishes (McDowall, 1987) because much of their life cycle is in marine and brackish environments. This synthesis of information is meant to provide current information and understanding of this fauna and its relative vulnerability to changing Arctic conditions. There are 104 species... Types: Citation; Tags: Alaska, Aquatic Biology, Arctic, Arctic, Beaufort Sea, All tags... Bering Sea, Bering Strait, Chukchi Sea, Chukchi-Beaufort Lease Area, Northwest Territories, Nunavut, U.S. Exclusive Economic Zone, USGS Science Data Catalog (SDC), Yukon, biogeography, distributions, ecology, fish, marine, marine fishery resources, northeast Russia, northwest Canada, Fewer tags Sediment-quality and water-toxicity data from 10 sites on the Westside Creeks and San Antonio River, San Antonio, Texas, 2014 Sediment samples and samples for water-toxicity testing were collected during 2014 from several streams in San Antonio, Texas known locally as the Westside creeks (Alazán, Apache, Martínez, and San Pedro Creeks) and from the San Antonio River. Samples were collected once during base-flow and again after periods of storm-water runoff (post-storm conditions) to determine baseline sediment- and water-quality conditions. Streambed-sediment samples were analyzed for selected constituents, including trace elements and organic contaminants such as pesticides, polychlorinated biphenyls (PCBs), brominated flame retardants, and polycyclic aromatic hydrocarbons (PAHs). Categories: Data; Tags: Alazán Creek, Apache Creek, Bexar County, Brominated flame retardants, Fathead minnow, All tags... Halogenated organic compounds, Martínez Creek, PAH, PCB, Pesticides, Pimephales promelas, Polychlorinated biphenyls, Polycyclic aromatic hydrocarbons, San Antonio, San Antonio River, San Pedro Creek, Sediment-quality, Texas, Trace elements, USA, USGS Science Data Catalog (SDC), USGS Station ID 08178100, USGS Station ID 08178310, USGS Station ID 08178345, USGS Station ID 08178375, USGS Station ID 08178410, USGS Station ID 08178445, USGS Station ID 08178460, USGS Station ID 08178465, USGS Station ID 08178504, USGS Station ID 08178515, United States, Water Quality, Water-toxicity, Westside Creeks, Fewer tags Susceptibility and antibody response of the laboratory model zebra finch (Taeniopygia guttata) to West Nile Virus: Data The data set contains the results of experimental challenge of captive zebra finches with an American crow isolate of West Nile virus (WNV). Data include infectivity, mortality, viremia, oral shedding of virus, and serology for anti- WNV antibodies. Australian and Timor zebra finches were used in this study and both are useful as a laboratory model of an avian species with moderate susceptibility to WNV. Categories: Data; Types: Citation; Tags: National Wildlife Health Center, USGS Science Data Catalog (SDC), West Nile virus, immunoassay, qRT-PCR, All tags... survival analysis, Fewer tags Annual California Sea Otter Census - 1985-2014 Spring Census Summary This dataset represents an archived record of annual California sea otter surveys from 1985-2014. Survey procedures involve counting animals during the "spring survey" -- generally beginning in late April or early May and usually ending in late May early June but may extend into early July, depending on weather conditions. Annual surveys are organized by survey year and within each year, three shapefiles are included: census summary of southern sea otter, extra limit counts of southern sea otter, and range extent of southern sea otter. The surveys, conducted cooperatively by scientists of the U.S. Geological Survey, California Department of Fish and Wildlife, U.S. Fish and Wildlife Service and Monterey Bay Aquarium... Categories: Data; Tags: California, Central California Coastal, Coast, Southern California Coastal, USGS Science Data Catalog (SDC), All tags... aerial counts, biota, distribution, environment, ocean, range, sea otter census, sea otters, sea otters, shore counts, Fewer tags Histopathological assessment of the digestive gland of a freshwater snail (Lymnaea stagnalis) exposed to uranium This dataset consists of measurements of the digestive gland in the freshwater snail Lymnaea stagnalis orally exposed to uranium. The objective of the study was to assess the morphological effects of uranium on the snail digestive gland by light microscopy. Laboratory-cultured L stagnalis were exposed to either synthetic or natural solid phases of uranium and a subset (6 controls and 6 exposed) were euthanized and fixed in 10% neutral buffered formalin for histopathological assessment. Slides were processed and stained with hematoxalin and eosin as per standard procedure (Luna 1968). The size of each sample, the length and width of digestive gland tubules (5 random glands per sample) and height of digestive cells... Categories: Data; Tags: Environmental Health, Lymnaea stagnalis, Madison, Wisconsin, USGS Science Data Catalog (SDC), Wildlife Biology, All tags... Wildlife Disease, digestive gland, uranium, Fewer tags Exotic and perennial grass cover for pastures in the Soda Fire (2016) The point data file ("Soda Fire Point and Pasture Data (2016).Point Data.csv") includes 2016 vegetative cover values of exotic annual grass and perennial grass measured within three different types of plots for 75 pastures in the Soda Fire, which burned in 2015: 6m² plot using a grid-point intercept photo software, SamplePoint (Booth et al. 2006), 1m² quadrat using an unguided rapid ocular estimate in the field, 531m² circular plot using an unguided rapid ocular estimate in the field. Smaller plots were nested within larger plots. The pasture data file ("Soda Fire Point and Pasture Data (2016).Pasture Data.csv") includes pasture level metrics of area, elevation, precipitation, slope, heatload, soils, and herbicide... Categories: Data; Types: Citation; Tags: Botany, Ecology, Idaho, Idaho BLM, Land Use Change, All tags... Malheur County, Oregon, Owyhee County, Soda Wildfire, USGS Science Data Catalog (SDC), biota, exotic annual grass, fires, grid point intercept, perennial grass, sample size, vegetation, vegetation cover, Fewer tags Created snag characteristics and cavity-nesting bird associations in the CFIRP stands, McDonald-Dunn Research Forest, Corvallis, OR, USA, 2016 Snags provide critical habitat for nearly one-third of wildlife species in forests of the Pacific Northwest, so historic declines in snags are thought to have had a strong impact on biodiversity. Resource managers often create snags to mitigate the scarcity of snags within managed forests, but information regarding the function and structure of created snags across long time periods (>20 years) is absent from the literature. Using snags that were created by topping mature Douglas-fir trees (Pseudotsuga menziesii) as part of the OSU College of Forestry Integrated Research Project, we measured characteristics of 731 snags and quantified foraging and breeding use of snags by birds 25-27 years after their creation.... Categories: Data; Tags: Botany, CFIRP, Douglas fir, Ecology, Forestry, All tags... Oregon Coast Range, Pseudotsuga menziesii, USGS Science Data Catalog (SDC), Wildlife Biology, cavity-nesting birds, created snag, silviculture, snag persistence, Fewer tags One Meter Topobathymetric Digital Elevation Model for Majuro Atoll, Republic of the Marshall Islands, 1944 to 2016 Located in the northern tropical Pacific Ocean, Majuro is the capital of the Republic of the Marshall Islands. Majuro Atoll consists of a large, narrow landmass and a set of smaller perimeter islands surrounding a lagoon that is over 100 square miles in size. The waters surrounding the Majuro Atoll land areas are relatively shallow with poorly mapped bathymetry. However, the Pacific Ocean on the exterior of the coral atoll and the lagoon within its interior consist of deep bathymetry with steep slopes. The highest elevation of the Majuro Atoll is estimated at only 3-meters above sea level, which is the island community of Laura located on the western part of the atoll. At the eastern edge of the atoll lies the capital... Categories: Data; Tags: 3D Elevation Program, 3DEP, American Society of Photogrammetry and Remote Sensing, Base Maps, Bathymetric, All tags... Bathymetry, Calalin, Calalin Channel, CoNED, Coastal National Elevation Database, Coastal Zone, DEM, DTM, Digital Elevation Model, Digital Terrain Model, Djarrit, Earth Cover, Geography, Geomorphology, Hydrologic, Hydrologic Modeling, Information Sciences, Laura, Lidar Bathymetry, Light Detection and Ranging, Majuro, Majuro, Majuro Atoll, Majuro Atoll, Majuro Atoll, Majuro Atoll, Multi-beam Sonar, National Standards for Spatial Digital Accuracy, Pacific Islands, Pacific Ocean, RMI, Remote Sensing, Republic of the Marshall Islands, Republic of the Marshall Islands, Republic of the Marshall Islands, Republic of the Marshall Islands, Rita, SDB, Satellite-derived bathymetry, SfM, Single-beam Sonar, Structure from Motion, TBDEM, Topobathy, Topobathymetric, Topobathymetric Digital Elevation Model, Topobathymetric Lidar, U.S., U.S. Geological Survey, USA, USGS, USGS Science Data Catalog (SDC), United States, Water Resources, Western Pacific, Western Pacific Islands, lidar, Fewer tags Terrestrial Light Detection and Ranging Topographic Survey Data for Two Recreation Areas Near Blue Mountain Lake and Nimrod Lake, Arkansas, March 2020 The U.S. Geological Survey collected topographic data in cooperation with the U.S. Army Corps of Engineers to assist in the management of two recreation areas at Blue Mountain Lake and near Nimrod Lake in Arkansas. Data were collected March 3-4, 2020 using terrestrial light detection and ranging (T-lidar) surveying equipment, Global navigation Satellite System (GNSS) surveying equipment, and conventional surveying techniques. The surveyed locations had a parking area, boat ramp, and some small recreational structures. Each site was surveyed using a FARO 3D tripod-mounted T-lidar unit. Additionally, a topographic survey was conducted in order to georeference the lidar survey. These topographic data were collected... Categories: Data; Tags: ASCII, Arkansas, Blue Mountain Lake, Geography, Hydrology, All tags... Nimrod Lake, State Plane, U.S. Geological Survey, USGS, USGS Science Data Catalog (SDC), Water Resources, elevation, geology, inland waters, location, surveying, terrestrial lidar, utilitiesCommunication, Fewer tags Mapped fire perimeters from the Sky Island Mountains of US and Mexico: 1985-2011 Polygon locations of fire perimeters in the Sky Island mountain ranges in the Madrean Archipelago Ecoregion of the southwestern United States and northern Mexico. These fires occurred from 1985 to 2011 and were mapped using Landsat satellite imagery. Tags: Arizona, USA, Chihuahua, Mexico, Land Use Change, Madrean Archipelago, New Mexico, USA, All tags... Remote Sensing, Sonora, Mexico, USGS Science Data Catalog (SDC), biota, burn mapping, fire severity, landsat, remote sensing, wildfire, Fewer tags Switchgrass waterway buffers in the eastern Great Plains Switchgrass (Panicum virgatum L.), a highly productive perennial grass, has been recommended as one potential source for cellulosic biofuel feedstocks. Previous studies indicate that planting perennial grasses (e.g., switchgrass) in high topographic relief cropland waterway buffers can improve local environmental conditions and sustainability. The main advantages of this land management practice include (1) reducing soil erosion and improving water quality because switchgrass requires less tillage, fertilizers, and pesticides; and (2) improving regional ecosystem services (e.g., improving water infiltration, minimizing drought and flood impacts on production, and serving as carbon sinks). In this study, we mapped... Tags: Energy Resources, Land Use Change, Remote Sensing, USGS Science Data Catalog (SDC), cellulosic biofuel, All tags... crop, erosion, riparian zones, switchgrass, watershed management, waterway, Fewer tags Boat-based water-surface cross sectional elevation surveys along the upper Willamette River, Oregon, in Spring, 2015 Water-surface elevation measurements were collected in Spring, 2015 along the upper Willamette River, Oregon, between Harrisburg and Corvallis. These surveys were collected over a small range of discharges, from 6,900 cubic feet per second to 8,300 cubic feet per second, using a real-time kinematic global positioning system (RTK-GPS) on a motorboat at various cross sections along the river. These datasets were collected for equipment calibration and validation for the National Aeronautics and Space Administration’s (NASA) Surface Water and Ocean Topography (SWOT) satellite mission. This is one of multiple survey datasets that will be released for this effort. Tags: AirSWOT, Corvallis, Harrisburg, Oregon, RTK, All tags... USGS Science Data Catalog (SDC), Water Resources, Willamette River, discharge, inland waters, river, surface water, water surface elevation, Fewer tags Concentrations of tetrachloroethylene in tree-core and passive soil-gas samples and interpolated tetrachloroethylene soil data at the Vienna Wells site, Maries County, Missouri, 2011-2016 This U.S. Geological Survey (USGS) Data Release contains tree-core, soil-gas, and soil data collected at the Vienna Wells Superfund site in Vienna, Missouri by the U.S. Geological Survey between 2011 and 2016. Concentrations of tetrachloroethylene (PCE) are reported for each sample in each medium. Tree-core sampling was conducted over two days (July 29, 2014 and May 21, 2015). Trees sampled on July 29, 2014 were used to calculate concentration centroids for each tree to compare with concentration centroids in soil samples. Tree 29 was sampled on May 21, 2015 to characterize and model tetrachloroethylene concentrations within a single tree. An interpolated soil surface was created from 1,016 soil samples (see doi:... Tags: Botany, Environmental Health, Hydrogeology, Soil Sciences, Superfund site, All tags... USGS Science Data Catalog (SDC), Water Quality, environment, phytoforensics, vegetation, Fewer tags Contiguous US and Global streamflow gages measuring zero flow We report the site number and locations of 5798 streamflow gages displaying zero flow for at least one day in their daily records. 4891 of these gages are from the GRDC network, and 906 are USGS gages in the contiguous US. Additionally, provisional data for two USGS gages 1) Rio Puerco near Bernardo, NM (USGS site: 08353000) and 2) Agua Fria River Near Mayer, AZ (USGS site: 09512500) are provided to illustrate zero flow record behaviors. Categories: Data; Tags: Global, United States, Hydrology, Intermittent streams, USGS Science Data Catalog (SDC), Water Resources, All tags... inlandWaters, Fewer tags 1 2 3 4 5 ... »