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Data for calculating population, collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure (ver. 2.0, June 2017) The U.S. Geological Survey, Western Ecological Research Center (USGS-WERC) was requested by the Bureau of Ocean Energy Management (BOEM) to create a database for marine birds of the California Current System (CCS) that would allow quantification and species ranking regarding vulnerability to offshore wind energy infrastructure (OWEI). This was needed so that resource managers could evaluate potential impacts associated with siting and construction of OWEI within the California Current System section of the Pacific Offshore Continental Shelf, including California, Oregon, and Washington. Along with its accompanying Open File Report (OFR), this comprehensive database can be used (and modified or updated) to quantify... Categories: Data Release - Revised; Types: Citation, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Biota, California, California Current System, Environment, Ocean wind energy, All tags... Oregon, Pacific Outer Continental Shelf, Renewable energy, Seabirds, USGS Science Data Catalog (SDC), Vulnerability assessment, Washington, Fewer tags Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data (i) This dataset presents macroscopic and microscopic pathological findings and bacteriology of 178 tadpoles diagnosed with Severe Perkinsea Infections. (ii) Specimen were collected and submitted to the NWHC as part of mortality investigations and collection of specimen from apparently healthy populations as part of ongoing amphibian health monitoring. (iii) Necropsies and gross evaluation of carcasses were carried out under a dissecting microscope. (iv) Severe Perkinsea Infection was confirmed in each specimen by histological observation of pathological changes in tissues with presence of Perkinsea-like organisms in at least one organ, including brain, eyes, gastrointestinal tract, gills, heart, liver, lungs, kidney,... Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: USGS Science Data Catalog (SDC), Unites States of Ameica, amphibian, biota, case definition, All tags... emerging infectious disease, histopathy, pathogenesis, pathogenic Perkinsea Clade, ranavirus, tadpoles, Fewer tags Hierarchically nested and biologically relevant monitoring frameworks for Greater Sage-grouse, 2019, Cluster Level 7 (Wyoming), Interim wy_lvl7_coarsescale: Wyoming hierarchical cluster level 7 (coarse-scale) for Greater sage-grouse We developed a hierarchical clustering approach that identifies biologically relevant landscape units that can 1) be used as a long-term population monitoring framework, 2) be repeated across the Greater sage-grouse range, 3) be used to track the outcomes of local and regional populations by comparing population changes across scales, and 4) be used to inform where to best spatially target studies that identify the processes and mechanisms causing population trends to change among spatial scales. The spatial variability in the amount and quality of habitat resources can affect local population success and result in different... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Centrocercus urophasianus, Greater sage-grouse, United States, Wyoming, adaptive management, All tags... biota, boundaries, graph theory, habitat connectivity, hierarchical sampling units, population monitoring, Fewer tags SPV field trials bait uptake data These data were collected as part of a field trial to test the effectiveness of a sylvatic plague vaccine (see Rocke et al., 2017 for details). Vaccine and control plots were selected randomly from the available pairs at each location. Baits containing Rhodamine B, a biomarker, were distributed at each plot. At least 1 week and no more than 2 months post-baiting each year, local collaborators captured, marked, and sampled prairie dogs. Hair and whisker samples were collected from up to 50 unique prairie dogs from each plot each year. Sex, age, weight, and the identity of all current-year and prior-year recaptures were recorded for each captured animal. In the laboratory, hair/whiskers were assessed for the presence... Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Arizona, Awapa Plateau, Buffalo Gap National Grasslands, Cedar City, Charles M. Russell National Wildlife Refuge, All tags... Colorado, Coyote Basin, Espee Ranch, Gunnison, Larimer, Lower Brule, Montana, Pitchfork Ranch, Rita Blanca National Grasslands, South Dakota, Texas, USGS Science Data Catalog (SDC), Utah, Wind Cave National Park, biota, health, prairie dogs, sylvatic plague vaccine, Fewer tags Hierarchically nested and biologically relevant monitoring frameworks for Greater Sage-grouse, 2019, Cluster Level 2 (Wyoming), Interim wy_lvl2_finescale: Wyoming hierarchical cluster level 2 (fine-scale) for Greater sage-grouse We developed a hierarchical clustering approach that identifies biologically relevant landscape units that can 1) be used as a long-term population monitoring framework, 2) be repeated across the Greater sage-grouse range, 3) be used to track the outcomes of local and regional populations by comparing population changes across scales, and 4) be used to inform where to best spatially target studies that identify the processes and mechanisms causing population trends to change among spatial scales. The spatial variability in the amount and quality of habitat resources can affect local population success and result in different... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Centrocercus urophasianus, Greater sage-grouse, United States, Wyoming, adaptive management, All tags... biota, boundaries, graph theory, habitat connectivity, hierarchical sampling units, population monitoring, Fewer tags Mortality factors for dead trees from a subset of plots from the Sierra Nevada Forest Dynamics Plot Network from 1998 to 2010 This dataset was used to summarize and analyze the mortality factors recorderd on dead trees in the Sierra Nevada Forest Dynamics Plot Network, which is managed by the Sequoia and Kings Canyon Field station of the U.S. Geological Survey's Western Ecological Research Center. Each row of the dataset represents an individual dead tree. These are dead trees that were recorded in the network from 1998 to 2010 for the subset of plots as described in the associated manuscript; These data support the following: Das, A.J., Stephenson, N.L., Davis, K.P. 2016. Why do trees die? Characterizing the drivers of background tree mortality. Ecology. 97(10): 2616-2627, https://doi.org/10.1002/ecy.1497 Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Sequoia-Kings Canyon National Park, Sierra Nevada, USGS Science Data Catalog (SDC), Yosemite National Park, bark beetles, All tags... tree mortality, tree mortality factors, tree pathogens, Fewer tags Stream Temperature in the Lahontan Basin of Nevada and California, 2017-2019 This dataset includes hourly stream temperature data for 139 temperature logger sites throughout the Lahontan Basin Region of Northern Nevada and Eastern California. Data loggers were part a study beginning in 2017, with data available through 2019 for most locations. The spatial data layer contains site locations, geographic information, data summaries, mean August stream temperatures, and modeled NorWeST stream temperatures. The Wet-Dry delineation file contains daily flow status estimates derived from stream temperature data for each site. The Site Visit file contains the date and time of the site visit along with associated information on site flow conditions, water depths, logger conditions, and stream logger... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Aquatic Biology, California, Ecology, Hydrology, Intermittent, All tags... Nevada, Perennial, Stream / River, Stream Temperature, USGS Science Data Catalog (SDC), Watershed, environment, inlandWaters, streamflow, surface water (non-marine), water temperature, Fewer tags Surveys and Monitoring of Coastal Cactus Wren in Southern San Diego County, 2021 Data presented are results of surveys in 2021 for San Diego Cactus Wren (Campylorhynchus brunneicapillus) in southern San Diego County. Surveys were conducted at 378 plots. Plots were surveyed twice in 2021 and the number, age (adult or juvenile), banding status (color banded or not), and breeding status (paired, unpaired, or unknown) of all wrens recorded. Habitat covariate data were collected including amount of dead and stressed cactus in the plot, percent cover of bare ground, and the dominant and percent cover of invasive species. Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: California, San Diego, animal and plant census, biota, birds, All tags... drought, habitats, monitoring, productivity, survey, survival, vocalization methods, Fewer tags Rat mark-recapture data in Hawaii Volcanoes National Park from 2015-2017 In Hawai‘i and other oceanic islands with few native land mammals, black rats (Rattus rattus) are among the most damaging invasive vertebrate species to native forest bird populations and habitats, due to their arboreal behavior and generalist foraging habitats and habitat use. This is a selected data set used to assess the impacts of rodenticide treatment on black rat (Rattus rattus) abundance within Hawaii Volcanoes National Park (HAVO). The key objective was to identify rat abundance before and after rodenticide treatment, using paired non-treatment and treatment plots at high elevation (1700-1830m) and low elevation (1220-1340 m). This dataset includes the results of a mark recapture study that took place within... Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: BACI, Hawaii, Hawaii County 2, Hawaii Volcanoes National Park, Hawaii Volcanoes National Park, All tags... invasive rat, invasive species, natural resource management, nest success, predator control, Fewer tags February 2020 National Wetlands Inventory, Mississippi Barrier Islands Habitat Classification: (Cat Island, Ship Island, Petit Bois Island and Horn Island) This data set consists of digital data describing wetlands and uplands habitats for the Mississippi Coastal Improvements Program (MsCIP) area, consisting of Cat, Ship, Horn and Petit Bois Islands for the year 2020. Wetlands were classified using the Cowardin, et al., wetlands classification scheme to the level of freshwater and tidal, salinity modifiers. Uplands were classified using a customized classification scheme which can be cross-referenced to Anderson, et. al. For this dataset, upland dunes were delineated as areas at or above 1.524 meters (5 feet) as determined in the Lidar data that was referenced without modification for this classification. With this elevation criteria some delineated upland dune features... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Cat Island, Geography, Habitats, Horn Island, Land Use Change, All tags... Land Use Change, Mississippi Barrier Islands, Mississippi Coastal Improvements Program (MSCIP), National Wetlands Inventory, National Wetlands Inventory (NWI), Petit Bois Island, Remote Sensing, Remote Sensing, Ship Island, USGS Science Data Catalog (SDC), Wetland ecosystems, avian resources, biota, coastal ecosystems, environment, habitat analysis, habitat monitoring, marine, terrestrial, turtle resources, wetland restoration, Fewer tags Pre-restoration vegetation data, Little Saint Francis River chat pile site, Missouri, USA, 2017 and 2018 This data set includes geospatial data and tables providing location, environmental, and vegetation data collected in 2017 and 2018 at the Little Saint Francis River (LSFR) chat pile restoration site, Fredericktown, Madison County, Missouri. Restoration actions are being implemeneted as part of the settlement for the Madison County Mines Superfund site to compensate the public for losses of natural resources and the services they provide as part of the Natural Resource Damage Assessment and Restoration Southeast Missouri Lead Mining District case. Data were collected prior to and during the early stages of restoration actions to restore bottomland forest habitat, reduce invasive plant species abundance, and improve... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Fredericktown, Little Saint Francis River, Madison County, Madison County Mines Superfund Site, Missouri, All tags... Southeast Missouri Lead Mining District, USGS Science Data Catalog (SDC), biota, contamination, environment, hydrology, restoration, soils, vegetation, Fewer tags Active channel in the Lower Virgin River before and after a 40 yr flood (December 2010) Active channel as defined by remote sensing before (2010 and after (2011) a 40 year return period flood (December 2010) within the lower Virgin River, Nevada. Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Arizona, Nevada, Virgin River, active channel, biota, All tags... lidar, orthophotography, remote sensing, Fewer tags Effects of Flood Inundation and Invasion by Phalaris arundinacea on Nitrogen Cycling in an Upper Mississippi River Floodplain Forest data This data set consists of monthly averages of soil and litter properties. Rows are grouped in the following order: year, month, vegetation type, plot ID. Within a single month five plots were sampled within each of the 2 vegetation types (10 plots total). Columns F+ represent individual measurements. Categories: Data; Types: Citation, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Mississippi River, Nitrogen cycling, Pool 8, USGS Science Data Catalog (SDC), Upper Mississippi River, All tags... Wisconsin, disturbance, flood pulse, floodplain restoration, floodplains, nitrogen, Fewer tags Perfluoroalkyl contaminant exposure in tree swallows nesting at Clarks Marsh, Oscoda, MI Dataset A site in north eastern MI, Oscoda Township, has some of the highest recorded exposure in birds to perfluorinated substances (PFASs) in the U.S. Some egg and plasma concentrations at that location exceeded the lowest reproductive effect threshold established for two avian laboratory species. The objectives of this study were to determine whether there were reproductive effects or physiological responses in a model bird species, the tree swallow (Tachycineta bicolor), associated with this extremely high exposure to PFASs. The lack of exposure above background to other contaminants at this site allowed for an assessment of PFAS effects without the complication that responses may be caused by other contaminants. A... Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Clarks Marsh, Oscoda, Michigan, USA, Oscoda, Michigan, USA, PFOS, Perfluorinated chemicals, USGS Science Data Catalog (SDC), All tags... Wurtsmith Airforce Base, Oscoda, Michigan, USA, biota, physiological responses, reproductive effects, tree swallows, Fewer tags 2015 Pool 5 Drawdown Land Cover/Land Use Data Aerial imagery for the Upper Mississippi River System (UMRS) Navigational Pool 5 drawdown follow-up was collected in true color (TC) in August of 2015 at 6”/pixel using a mapping-grade Applanix DSS 439 digital aerial camera. All TC aerial images were orthorectified, mosaicked, and compressed into a JPEG2000-format image. The TC aerial images were interpreted and automated using a genus-level 150-class Long Term Resource Monitoring (LTRM) vegetation classification. The 2015 vegetation database was prepared by or under the supervision of competent and trained professional staff using documented standard operated procedures. Categories: Data; Types: Citation, Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Aerial imagery, Aquatic vegetation, Floodplain, Image interpretation, Land cover/land use, All tags... Minnesota, Mississippi River, Pool 5, Upper Mississippi River System, Vegetation mapping, Water-level drawdown, Wisconsin, imageryBaseMapsEarthCover, Fewer tags Zebra Mussel Mortality - Assessment of uncontained Zequanox applications in a Midwestern lake data We applied Zequanox using a custom-engineered, boat mounted application system to replicated 0.30 Hectare plots within a small inland lake. The objectives of these applications were to determine if uncontained, open-water Zequanox applications could effectively control zebra mussel populations and protect native unionid mussel populations within zebra mussel infested systems. The datasets included are as follows: Exposure Water Chemistry Hardness and Alkalinity Native Mussel Sonde Water Chemistry Zebra Mussel Density Zebra Mussel Length Zebra Mussel Mortality Zequanox Concentration ShapeFiles: PLOTS, UNIONID, ZEQUANOX CONCENTRATION, ZM_DENSITY, ZM_MORTALITY Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Round Lake, Emmet County, Michigan, USA, USGS Science Data Catalog (SDC), Zebra Mussel, Zequanox Seasonal trends in eDNA detection and occupancy of bigheaded carps, Wabash River, IN: Raw Data Invasive species may vary in their seasonal distribution and abundance due to environmental conditions such as precipitation and temperature. Bigheaded carps, which include silver and bighead carp, are one such taxon of invasive species that appear to change habitats seasonally. Seasonal changes in bigheaded carp distribution may occur because of hydrological changes, water temperature changes, and spawning activities. Monitoring this seasonal dispersal and migration is important for management to control the population size and spread of the species. We examined if environmental DNA (eDNA) approaches could detect seasonal changes in the occurrence of DNA in water samples and used these approaches to calculate the... Categories: Data; Types: Citation, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Americus, French Post, Indiana, Mascouten, Occupancy modeling, All tags... Presence/absence, USGS Science Data Catalog (SDC), Wabash River, big headed carp, invasive species, Fewer tags Katahdin Woods and Waters National Monument Seboeis Unit Vegetation Mapping Project: Vegetation Points (Accuracy Assessment Sites and Vegetation Plots) During summer 2019, botanists with the Maine Natural Areas Program collected data from 94 vegetation plots for plant community characterization. The sampling data were entered into the National Park Service PLOTS version 4.0 (National Park Service 2018) for analyses to characterize vegetation associations in the U.S. National Vegetation Classification. An accuracy assessment was performed on the draft version of the vegetation map layer. During the summer of 2020, field crews collected data from 107 stratified and randomly selected sites for evaluating the accuracy of the vegetation map layer for those map classes representing U.S. National Vegetation Classification associations. The accuracy assessment field data... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Accuracy Assessment, Data Collection, Katahdin Woods and Waters National Monument, Maine, Map, All tags... NVCS, National Park Service, National Vegetation Classification Standard, Natural Resources Preservation Program, Observation, U.S. National Vegetation Classification, USNVC, United States, Vegetation Plot, biota, environment, Fewer tags Data supporting Landsat time series assessment of invasive annual grasses following energy development To determine if invasive annual grasses increased around energy developments after the construction phase, we calculated an invasives index using Landsat TM and ETM+ imagery for a 34-year time period (1985-2018) and assessed trends for 1,755 wind turbines (from the U.S. Wind Turbine Database) installed between 1988 and 2013 in the southern California desert. The index uses the maximum normalized difference vegetation index (NDVI) for early season greenness (January-June), and mean NDVI (July-October) for the later dry season. We estimated the relative cover of invasive annuals each year at turbine locations and control sites and tested for changes before and after each turbine was installed. These data were used... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service, Shapefile; Tags: California, California South, Google Earth Engine, Landsat, Normalized Difference Vegetation Index, All tags... USGS Science Data Catalog (SDC), desert ecosystems, ecology, energy development, energy resources, grassland ecosystems, grasslands, invasive species, nonindigenous species, time series, vegetation, wind energy, Fewer tags Mean of the Top Ten Percent of NDVI Values in the Yuma Proving Ground during Monsoon Season, 1986-2011 This study uses growth in vegetation during the monsoon season measured from LANDSAT imagery as a proxy for measured rainfall. NDVI values from 26 years of pre- and post-monsoon season Landsat imagery were derived across Yuma Proving Ground (YPG) in southwestern Arizona, USA. The LANDSAT imagery (1986-2011) was downloaded from USGS’s GlobeVis website (http://glovis.usgs.gov/). Change in NDVI was calculated within a set of 2,843 Riparian Area Polygons (RAPs) up to 1 km in length defined in ESRI ArcMap 10.2. Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Arizona, Landsat TM, NDVI, Normalized Difference Vegetation Index, Sonoran Desert, All tags... Southwestern United States, USGS Science Data Catalog (SDC), Yuma Proving Ground, biota, climatologyMeteorologyAtmosphere, ephemeral stream channels, monsoon season, Fewer tags 1 2 3 4 5 ... 15 »