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Spatial Predictions of Mojave Desert Tortoise, Sonoran Desert Tortoise and Pooled Species Habitat Suitability for present-day (1950 – 2000 yr) This dataset provides spatial predictions of habitat suitability for Gopherus agassizii (Agassiz’s desert tortoise), Gopherus morafkai (Morafka’s desert tortoise) and a pooled-species model under current conditions (1950 – 2000 yr). The raster layers contained here accompany the manuscript Inman et al. 2019 and were used to evaluate subtle ecological niche differences between G. agassizii and G. morafkai, and identify local species-environment relationships. Spatial predictions of habitat suitability were created using MaxEnt version 3.4.0 (Phillips et al., 2006), a widely-used software for SDM in presence-background frameworks. Detailed methods are provided in Inman et al. 2019. Inman et al. 2019. Local niche... Tags: Gopherus agassizii, Gopherus morafkai, North America, North America, Western USA, All tags... animals, biota, conservation genetics, desert tortoise, deserts, ecological niche, genetics, geospatial analysis, habitats, multiscale geographically weighted regression, species distribution modelling, Fewer tags Demographic data and location information for the endangered Gailum buxifolium from 2005 to 2014 on Santa Cruz and San Miguel Islands, California The sea-cliff bedstraw (Galium buxifolium) data set contains two types of information, formatted as CSVs: 1) Spatial coordinates (WGS 84) of known population occurrences on Santa Cruz and San Miguel Islands, California, as of 2006 (sensitive locality information); 2) Demographic data measured at four populations growing on Santa Cruz Island. Three of the populations were measured in 2005 and 2006, the fourth was measured in 2005, 2006, 2008, 2010, 2011, and 2014. These data support the following publication: McEachern, K., Chess, K.A., Flagg, K., and Niessen, K.G., 2019, Sea-cliff bedstraw (Galium buxifolium) patterns and trends, 2005–14, on Santa Cruz and San Miguel Islands, Channel Islands National Park, California:... Categories: Data; Tags: Botany, California Channel Islands, Channel Islands National Park, San Miguel Island California, Santa Cruz Island California, All tags... USGS Science Data Catalog (SDC), biota, field inventory and monitoring, plot sampling, population and community ecology, population dynamics, Fewer tags Principal components of climate variation in the Desert Southwest for the future time period 2040-2070 (RCP 8.5) Five principal components are used to represent the climate variation in an original set of 12 composite climate variables reflecting complex precipitation and temperature gradients. The dataset provides coverage for future climate (defined as the 2040-2070 normal period) under the RCP8.5 emission scenarios. Climate variables were chosen based on their known influence on local adaptation in plants, and include: mean annual temperature, summer maximum temperature, winter minimum temperature, annual temperature range, temperature seasonality (coefficient of variation in monthly average temperatures), mean annual precipitation, winter precipitation, summer precipitation, proportion of summer precipitation, precipitation... Categories: Data; Types: Downloadable, GeoTIFF, Map Service, Raster; Tags: Arizona, California, Colorado, Colorado Plateau, Great Basin, All tags... Mojave Desert, Nevada, New Mexico, Sonoran Desert, United States, Utah, atmospheric and climatic processes, climatologyMeteorologyAtmosphere, geospatial analysis, precipitation, Fewer tags Western Spadefoot Habitat Selection Based on Radio Telemetry in Orange County, California 2019 We conducted a radio telemetry study of adult western spadefoots (Spea hammondii) at 2 sites in southern California to characterize their survival, behavior, and movements from breeding through aestivation to inform conservation and management for the species. These data support the following publication: Halstead, B.J., Baumberger, K.L., Backlin, A.R., Kleeman, P.M., Wong, M.N., Gallegos, E.A., Rose, J.P., and Fisher, R.N., 2021. Conservation implications of spatiotemporal variation in the terrestrial ecology of an ephemeral pool-breeding amphibian. The Journal of Wildlife Management. Categories: Data; Tags: California, Orange County, Southern California, Spea hammondii, USGS Science Data Catalog (SDC), All tags... Wildlife Biology, activity, amphibians, anuran, biota, ecology, environment, habitat selection, home range, movement, survival, western spadefoot, Fewer tags WARMER-2 Model Inputs for Three Tidal Wetland Sites Across San Francisco Bay Estuary Accurate input data are important for making site-specific projections of tidal wetlands into the future. We developed bias-corrected digital elevation models (DEM) using the LEAN approach (LiDAR Elevation Adjustment with NDVI). LEAN DEMs were used as the initial elevation for model projections. Further, we conducted elevation and vegetation surveys across each study site to characterize elevation profiles of dominant species, which were used to inform organic productivity functions in WARMER-2. Tags: Brackish Marsh, Browns Island, Emergent Tidal Marsh, Emergent Wetland, Petaluma marsh, All tags... Rush Ranch, San Francisco Bay Estuary, biota, climate change, digital elevation model, lidar, numerical modeling, sea-level change, wetland, Fewer tags Fire Response Effects, Biocrust, and Vascular Plant Abundance Following Wildfire near Boise, Idaho (October 2021) Twenty quadrats within the burn perimeter of a September 2021 wildfire outside of Boise, Idaho were surveyed for the abundance of fire effects, biocrusts and vascular plants immediately post-fire. The fire was too small to be named. Char was measured as a proxy for fire intensity. Biocrusts were surveyed by morphogroup (crustose lichens, cup lichens, fruticose lichens, gelatinous lichens, short moss, tall moss) and vascular plants were surveyed by functional group (annual forbs, perennial grasses). Char was measured ocularly and biocrust/plant abundance was measured via point-vertex intercept at 40 points per quadrat. These data support the following publication: Condon, L.A., Shinneman, D.J., Rosentreter, R. and... Categories: Data; Tags: Botany, Great Basin, Idaho, USGS Science Data Catalog (SDC), biota, All tags... botany, community ecology, environment, fires, lichens, mosses, vascular plants, Fewer tags Sequoia and Yosemite National Parks Mortality and Fire Data (1990-2019) for Competition-Fire-Drought Interaction Analysis This dataset records mortality-- including involvement of bark beetles-- and burn severity information for trees in long term forest dynamics plots in Sequoia National Park and Yosemite National Park that experienced fire. These data support the following publication: Furniss, T.J., Das, A.J., van Mantgem, P.J., Stephenson, N.L. and Lutz, J.A., 2021. Crowding, climate, and the case for social distancing among trees. Ecological Applications, p.e2507, https://doi.org/10.1002/eap.2507 Categories: Data; Tags: California, Forestry, Sequoia National Park, Sierra Nevada, USGS Science Data Catalog (SDC), All tags... Yosemite National Park, bark beetle, biota, fires, forest ecosystems, insects, plot sampling, temperate forest, tree mortality, Fewer tags Hourly Sea Floor Water Temperatures Recorded at Four Kelp Forest Monitoring Sites at San Nicolas Island, California (2015-2019) The data represent hourly temperatures recorded at four permanent subtidal monitoring sites around San Nicolas Island, CA between November 2015 and October 2019. The temperatures were recorded by TidbiT (registered trademark) v2 model UTBI-001 (Onset Computer Corporation, Bourne, Massachusetts) archival temperature loggers attached at the sea floor. The loggers were deployed approximately 10-12 m deep at Nav Fac (12 m) on the north side of the island, at West End Urchin (11 m) on the southwest side, at east Dutch Harbor (11 m) on the south side, and at Daytona Beach (10 m) near the east end of the island. Categories: Data; Tags: California, Northeast Pacific, San Nicolas Island, Southern California Coastal, ocean temperature, All tags... oceans, Fewer tags Surveys and Monitoring of Coastal Cactus Wren in Southern San Diego County, 2021 Data presented are results of surveys in 2021 for San Diego Cactus Wren (Campylorhynchus brunneicapillus) in southern San Diego County. Surveys were conducted at 378 plots. Plots were surveyed twice in 2021 and the number, age (adult or juvenile), banding status (color banded or not), and breeding status (paired, unpaired, or unknown) of all wrens recorded. Habitat covariate data were collected including amount of dead and stressed cactus in the plot, percent cover of bare ground, and the dominant and percent cover of invasive species. Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: California, San Diego, animal and plant census, biota, birds, All tags... drought, habitats, monitoring, productivity, survey, survival, vocalization methods, Fewer tags Predator Movements and Duck Nests in Relation to Habitat Features in Suisun Marsh, CA (2016-2019) This dataset describes mesopredator locations (raccoons and striped skunks), dabbling duck nest locations (mallard, gadwall, and cinnamon teal), northern harrier nest locations, and random locations in relation to a set of habitat features in Suisun Marsh, California during 2016 through 2019. We designed a series of questions to link fine-scale predator movements and vulnerability of dabbling duck nests to predator encounters and egg predation. We conducted our study over a 4-year period using 41 GPS-collared raccoons and striped skunks, two of the most widespread mammalian predators of waterfowl eggs in North America, and more than 2000 monitored duck nests. Each night of movement for mesopredators contains the... Categories: Data; Tags: California, Suisun Marsh, USGS Science Data Catalog (SDC), Wildlife Biology, animal behavior, All tags... biota, environment, wetland ecosystems, Fewer tags Captures and Trapping Effort for Deer Mice (Peromyscus sonoriensis) at Point Reyes National Seashore, California, USA from 2021 to 2022 These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type. Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service, Shapefile; Tags: California, Ecology, Marin County, Point Reyes National Seashore, USGS Science Data Catalog (SDC), All tags... Wildlife Biology, biota, ecology, mammals, modeling, population and community ecology, restoration, Fewer tags Maternal Transfer of Mercury to Northern Elephant Seal Pups We used free-ranging northern elephant seals as a model species to investigate maternal transfer of mercury (Hg) to pups in relation to maternal traits, including maternal blood mercury concentrations, and to quantify the links between pup lanugo mercury concentrations and maternal mesopelagic foraging behavior during gestation. We satellite tracked known-age adult females at sea during their seven-month-long foraging trip to determine maternal foraging strategies (geographic locations and diving depths) and quantified mercury concentrations in maternal blood and their pups’ blood and lanugo (which is defined as pup hair grown in utero) early in lactation when seals were hauled out. We then tested how the maternal... Categories: Data; Tags: Ecology, Environmental Health, Marine Oceanic Mesopelagic Layer, USGS Science Data Catalog (SDC), Wildlife Biology, All tags... bioaccumulation, biota, contaminant transport, ecology, ecotoxicology, mercury, mercury contamination, seals, sea lions and walruses, Fewer tags Hourly GPS Locations, Associated Habitat Condition, and Annotated Life History State for Training Machine Learned Models of Waterfowl Daily Activity These data represent an annotated training data for machine learned life history classification of the daily activity of dabbling ducks (f. Anatidae sf. Anatinae) using hourly GPS data. Each row of data represents a single GPS location for one of 5 species of dabbling duck. Note: the machine learned model was developed to be general across sf. Anatinae and does not include specific reference to the species included. That information is obtainable from the point of contact upon request. Each data record contains unique identifiers for individual bird, individual date of locations for an individual bird, and for individual location. Each record contains spatial, temporal and associated habitat information. Each record... Categories: Data; Tags: Ecology, GPS measurement, Modified Normalized Difference Water Index, North America, USGS Science Data Catalog (SDC), All tags... Wildlife Biology, animal behavior, biota, birds, daily activity, ducks, environment, life history, location, population and community ecology, telemetry, waterfowl, Fewer tags Habitat Data for Plantago ovata in the Mojave Desert These datasets were developed to represent the geographic distribution of Plantago ovata in the Mojave Desert. This data release consists of two raster spatial layers (GeoTIFF) reflecting predicted habitat for the species within the Mojave Desert and the standard error in predictions. The habitat layer (raster dataset) is a continuous probability distribution of suitable habitat where values range from 0 (very low probability of species occurrence) to 1 (very high probability of species occurrence). An additional raster dataset provides the standard error in habitat predictions calculated among alternative habitat models: users should evaluate both the habitat and standard error datasets and exercise prudence when... Categories: Data; Tags: Arizona, California, Mojave, Nevada, Plantago ovata, All tags... Utah, biogeography, biota, habitats, maps and atlases, native plant materials development, native species, species distribution model, Fewer tags Spatially-Explicit Predictive Maps of Greater Sage-Grouse Brood Selection Integrated with Brood Survival in Nevada and Northeastern California, USA We used a hierarchical Bayesian modeling framework to estimate resource selection functions and survival for early and late brood-rearing stages of sage-grouse in relation to a broad suite of habitat characteristics evaluated at multiple spatial scales within the Great Basin from 2009 to 2019. Sage-grouse selected for greater perennial grass cover, higher relative elevations, and areas closer to springs and wet meadows during both early and late brood-rearing. Terrain characteristics, including heat load and aspect, were important in survival models, as was variation in shrub height. We also found strong evidence for higher survival for both early and late broods within previously burned areas, but survival within... Tags: Ecology, Geography, Great Basin, USGS Science Data Catalog (SDC), Wildlife Biology, All tags... adaptive habitat selection, chick survival, ecological trap, ecosystems, fires, habitat functional response, human impacts, maladaptive habitat selection, native species, resource selection function, shrubland ecosystems, western United States, Fewer tags Species Distribution Model (SDM) for Ambrosia dumosa in the Mojave Desert Preserving native species diversity is fundamental to ecosystem conservation. Selecting appropriate native species for use in restoration is a critical component of project design and may emphasize species attributes such as life history, functional type, pollinator services, and nutritional value for wildlife. Determining which species are likely to establish and persist in a particular environment is a key consideration. Species distribution models (SDMs) characterize relationships between species occurrences and the physical environment (e.g., climate, soil, topographic relief) and provide a mechanism for assessing which species may successfully propagate at a restoration site. In conjunction with information... Categories: Data; Types: Downloadable, GeoTIFF, Map Service, Raster; Tags: Arizona, California, Mojave, Nevada, Utah, All tags... biogeography, biota, habitats, maps and atlases, native plant materials development, native species, species distribution model, Fewer tags Species Distribution Model (SDM) for Muhlenbergia porteri in the Mojave Desert Preserving native species diversity is fundamental to ecosystem conservation. Selecting appropriate native species for use in restoration is a critical component of project design and may emphasize species attributes such as life history, functional type, pollinator services, and nutritional value for wildlife. Determining which species are likely to establish and persist in a particular environment is a key consideration. Species distribution models (SDMs) characterize relationships between species occurrences and the physical environment (e.g., climate, soil, topographic relief) and provide a mechanism for assessing which species may successfully propagate at a restoration site. In conjunction with information... Categories: Data; Types: Downloadable, GeoTIFF, Map Service, Raster; Tags: Arizona, California, Mojave, Nevada, Utah, All tags... biogeography, biota, habitats, maps and atlases, native plant materials development, native species, species distribution model, Fewer tags Species Distribution Model (SDM) for Oenothera deltoides in the Mojave Desert Preserving native species diversity is fundamental to ecosystem conservation. Selecting appropriate native species for use in restoration is a critical component of project design and may emphasize species attributes such as life history, functional type, pollinator services, and nutritional value for wildlife. Determining which species are likely to establish and persist in a particular environment is a key consideration. Species distribution models (SDMs) characterize relationships between species occurrences and the physical environment (e.g., climate, soil, topographic relief) and provide a mechanism for assessing which species may successfully propagate at a restoration site. In conjunction with information... Categories: Data; Types: Downloadable, GeoTIFF, Map Service, Raster; Tags: Arizona, California, Mojave, Nevada, Utah, All tags... biogeography, biota, habitats, maps and atlases, native plant materials development, native species, species distribution model, Fewer tags Mercury Contamination of Red-legged Kittiwakes in the Western Subarctic Pacific Ocean This dataset contains mercury concentrations and locations of wintering red-legged kittiwakes in the western subartic Pacific Ocean. These data support the following publication: Fleishman, AB, RA Orben, N Kokubun, A Will, R Paredes, JT Ackerman, A Takahashi, AS Kitaysky, and SA Shaffer. 2019. Wintering in the Western Subarctic Pacific increases mercury contamination of red-legged kittiwakes. Environmental Science and Technology, in press. Categories: Data; Tags: Pacific Ocean, USGS Science Data Catalog (SDC), Wildlife Biology, biogeography, biota, All tags... birds, contaminant exposure, distribution, hierarchical clustering, isotopic analysis, marine isoscape, mercury contamination, mesopelagic predator, migration (organisms), non-breading, seabird, seabird sentinels, stable isotopes, western subartic, Fewer tags Elevation Survey Across Southwest Florida Coastal Wetlands, 2021 Accurate elevation data in coastal wetlands is crucial for planning for sea-level rise. Elevation surveys were conducted across southwest Florida wetlands to provide ground validation of LiDAR as well as target long-term monitoring stations (surface elevation tables). Surveys were conducted in June 2021 across Ding Darling National Wildlife Refuge, Clam Bay, Rookery Bay National Estuarine Research Reserve, and Ten Thousand Islands National Wildlife Refuge. A combination of post-processed kinematic GPS and differential levelling survey techniques were employed, depending on the canopy cover. Categories: Data; Tags: Clam Bay, Ding Darling National Wildlife Refuge, Florida, GPS measurement, RTK GPS, All tags... Rookery Bay National Estuarine Research Reserve, Structural Geology, Ten Thousand Islands National Wildlife Refuge, USGS Science Data Catalog (SDC), differential leveling, elevation, elevation surveys, field methods, land surveying, Fewer tags 1 2 3 4 5 ... 16 »