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This data release is provided in support of Arismendi, I., Dunham, J.B., Heck, M.P., Schultz, L.D., Hockman-Wert, D.P., 2017, A statistical method to predict flow permanence in dryland streams from time series of stream temperature: Water, v. 9, no. 12, p. 946, https://doi.org/10.3390/w9120946. This code release contains all of the source code from the "Hidden Markov Model" sections of the associated manuscript. The source code was written using the R programming language (www.r-project.org, version 3.3.1). Running the code requires knowlege of the R programming language. The code snippet requires the folder location containing the data, and the site being processed, to be updated. The code requires certain R packages,...
Exposure (vulnerability) index for the future time period (2061-2080) representing projected climate conditions from the Meteorological Research Institute's Coupled Atmosphere-Ocean General Circulation Model, version 3, and the rcp85 emissions scenario. The exposure model uses LANDFIRE vegetation data and Worldclim climate data .The raster values represent exposure scores for the corresponding vegetation type. The modeled vegetation types can be spatially associated with the exposure values by overlaying them with the "landfire_veg_sw_300m.tif" raster.Exposure values represent where the location falls in climate space relative to its recent historical distribution:5 (core 5% of historical climate space); 10 (5 -...
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To assess the current topography of the tidal marshes we conducted survey-grade elevation surveys at all sites between 2009 and 2013 using a Leica RX1200 Real Time Kinematic (RTK)Global Positioning System (GPS) rover (±1 cm horizontal, ±2 cm vertical accuracy; Leica Geosystems Inc., Norcross, GA; Figure 4). At sites with RTK network coverage (San Pablo, Petaluma, Pt. Mugu, and Newport), rover positions were received in real time from the Leica Smartnet system via a CDMA modem (www.lecia-geosystems.com). At sites without network coverage (Humboldt, Bolinas, Morro and Tijuana), rover positions were received in real time from a Leica GS10 antenna base station via radio link. When using the base station, we adjusted...
This dataset is a continuous parameter grid (CPG) of normal (average) annual precipitation data for the years 1981 through 2010 in the Pacific Northwest. Source precipitation data was produced by the PRISM Climate Group at Oregon State University.
These datasets are continuous parameter grids (CPG) of permeability (and impermeability) of surface geology in the Pacific Northwest. Source data come from work by Chris Konrad, U.S. Geological Survey (USGS), and geologic map databases produced by USGS scientists.
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This dataset includes electrical resistance data from a network of 50 data loggers that was installed throughout the Willow-Whitehorse watershed of SE Oregon in September 2014. Data loggers were downloaded in August 2015 and September 2016. These data loggers were used as “electrical resistance” (ER) sensors, following Chapin et al. 2014. The sensors were Onset HOBO Pendant temperature data loggers that were modified to monitor streamflow intermittency and determine the timing of stream drying.
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This dataset is a shapefile that contains the grid outlines and identifiers for the tiles produced by the TopoWx ("Topographical Weather/Climate") temperature dataset as applied to the USGS North Central Climate Center Domain and the surrounding area of Montana. The TopoWx dataset contains gridded daily temperature and is an interpolated spatio-temporaldataset in the same vein as the well-known PRISM (http://www.prism.oregonstate.edu) and Daymet products (http://daymet.ornl.gov). Daily Tmin and Tmax are provided at a 30-arcsec resolution (~800m) from 1948-2012 along with the latest 30-year monthly normals (1981-2010). The goals of the TopoWx project were to produce a dataset that: (1) incorporates key landscape-scale...
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The purpose of this study was to understand how the U.S. Department of Interior’s federal land and resource managers and their stakeholders (i.e., NPS, BLM, FWS, BOR, BIA and tribes, among others) are experiencing and dealing with drought in their landscapes. The database is part of the Drought Risk and Adaptation in the Interior project. We conducted in-depth interviews (n=41) with DOI and tribal land managers in three case sites across the north central United States (northwest Colorado, southwest South Dakota, and Wind River Reservation), the goal of which was to develop a better understanding of drought vulnerabilities, risks, and responses in high-risk, multi-jurisdictional landscapes across the Missouri River...
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This dataset includes stream temperatures from two data loggers installed at one site in the Little Blitzen River of SE Oregon as part of a redband trout (Oncorhynchus mykiss gairdnerii) study. The site was used as an undisturbed reference in comparison with similar temperature monitoring sites in the Willow-Whitehorse watershed that experienced a 2012 fire that burned nearly the entire watershed.
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The files in the sub-folder "1. Juvenile coho salmon abundance and survival" consist of fish survey data and the associated analysis. The file "02_Fish survey data_all events_2019-11-27.csv" contains the actual fish survey data that was collected in Mason Creek, tributary of East Fork Lewis River, SW Washington, during summer of 2017. The protocol for the fish surveys are outline in the file "Fish Rescue Field Protocol_2017_FINAL VERSION_2017-06-01.pdf". The abundance and survival analysis can be found in the file "Juvenile MR abundance_Coho_02Contraints_2019-12-02.R". This file should be loaded through the .Rproj file "Fish Abundance.Rproj". There are many files needed to run the analysis that consist of summaries...
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We performed bathymetric surveys using a shallow-water echo-sounding system (Takekawa et al., 2010, Brand et al., 2012) comprised of an acoustic profiler (Navisound 210; Reson, Inc., Slangerup, Denmark), Leica RTK GPS Viva rover, and laptop computer mounted on a shallow-draft, portable flat-bottom boat (Bass Hunter, Cabelas, Sidney, NE; Figure 7). The RTK GPS obtained high resolution elevations of the water surface (reported precision 10 cm water depth. We recorded twenty depth readings and one GPS location each second along transects spaced 100 m apart perpendicular to the nearby salt marsh. We calibrated the system before use with a bar-check plate and adjusted the sound velocity for salinity and temperature differences....
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We performed bathymetric surveys using a shallow-water echo-sounding system (Takekawa et al., 2010, Brand et al., 2012) comprised of an acoustic profiler (Navisound 210; Reson, Inc., Slangerup, Denmark), Leica RTK GPS Viva rover, and laptop computer mounted on a shallow-draft, portable flat-bottom boat (Bass Hunter, Cabelas, Sidney, NE; Figure 7). The RTK GPS obtained high resolution elevations of the water surface (reported precision 10 cm water depth. We recorded twenty depth readings and one GPS location each second along transects spaced 100 m apart perpendicular to the nearby salt marsh. We calibrated the system before use with a bar-check plate and adjusted the sound velocity for salinity and temperature differences....
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To assess the current topography of the tidal marshes we conducted survey-grade elevation surveys at all sites between 2009 and 2013 using a Leica RX1200 Real Time Kinematic (RTK)Global Positioning System (GPS) rover (±1 cm horizontal, ±2 cm vertical accuracy; Leica Geosystems Inc., Norcross, GA; Figure 4). At sites with RTK network coverage (San Pablo, Petaluma, Pt. Mugu, and Newport), rover positions were received in real time from the Leica Smartnet system via a CDMA modem (www.lecia-geosystems.com). At sites without network coverage (Humboldt, Bolinas, Morro and Tijuana), rover positions were received in real time from a Leica GS10 antenna base station via radio link. When using the base station, we adjusted...
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We used WARMER, a 1-D cohort model of wetland accretion (Swanson et al., 2014), which is based on Callaway et al. (1996), to examine the effects of three SLR projections on future habitat composition at each study site. Each cohort in the model represents the total organic and inorganic matter added to the soil column each year. WARMER calculates annual elevation changes relative to MSL based on projected changes in relative sea level, subsidence, inorganic sediment accumulation, aboveground and belowground organic matter inputs, soil compaction, and organic matter decomposition for a representative marsh area. Cohort density, a function of soil mineral, organic, and water content, is calculated at each time step...
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The threat of droughts and their associated impacts on the landscape and human communities have long been recognized in the United States, especially in high risk areas such as the southcentral region. This project examines whether existing drought indices can predict the occurrence of drought events and their actual damages, how the adaptive capacity (i.e., resilience) varies across space, and what public outreach and engagement effort would be most effective for mitigation of risk and impacts. The study region includes all 503 counties in Arkansas, Louisiana, New Mexico, Oklahoma, and Texas. This data set was created to assess the community resilience to the drought hazards using the Resilience Inference Measurement...
The goal of barrier island restoration in the northern Gulf of Mexico is to restore barrier island morphology using sediment to support the functions and habitats the islands provide. Barrier island restoration typically involves placement of sediment either directly on the island footprint or within the littoral zone for system transport and distribution. The re-engineering of barrier islands presents numerous challenges and uncertainties associated with climate change induced hurricanes/storms and other dynamic components of the system such as sediment availability and erosional trends. The goal of this study was to use a collaborative SDM approach to develop two Bayesian decision network models (DMs) for restoration...
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This dataset provides downscaled climate projections at 800m spatial resolution for nine ecologically-relevant climate variables for the north central US region between 35.5N-49N latitude and 88W-118W longitude from the Met Office Hadley Center (UK) model, HadGEM2-ES, simulations (r1i1p1) from two emissions scenarios (RCP 4.5 and 8.5), which are downscaled using the Multivariate Adaptive Constructed Analog (MACA) method. These projections are available as five different (approximately) 30-year climate normals between 1950 and 2099 as monthly values, except for Aridity Index which are annual values. The five periods for which these climate normals are provided are 1950-1979 and 1980-2005 in the historic, and 2011-2040,...
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This dataset provides downscaled climate projections at 800m spatial resolution for nine ecologically-relevant climate variables for the north central US region between 35.5N-49N latitude and 88W-118W longitude from the NOAA Geophysical Fluid Dynamics Laboratory (USA) model, GFDL-ESM2M, simulations (r1i1p1) from two emissions scenarios (RCP 4.5 and 8.5), which are downscaled using the Multivariate Adaptive Constructed Analog (MACA) method. These projections are available as five different (approximately) 30-year climate normals between 1950 and 2099 as monthly values, except for Aridity Index which are annual values. The five periods for which these climate normals are provided are 1950-1979 and 1980-2005 in the...


map background search result map search result map TopoWx ("Topographical Weather/Climate") temperature dataset tile grid San Pablo, California: Tidal Marsh Digital Elevation Model Tijuana: Tidal Marsh Digital Elevation Model Humboldt, California: Tidal Marsh Bathymetry Digital Elevation Model San Pablo, California: Tidal Marsh Bathymetry Digital Elevation Models SLR Projections, Bolinas, Calif., 2070-2110 Combined county-level drought incidence, damage, and census data Stream Temperature Data in the Little Blitzen watershed of SE Oregon, 2009-15 GFDL-ESM2M: Downscaled climate projections at 800m spatial resolution for the north central United States based on the Multivariate Adaptive Constructed Analog (MACA) method HadGEM2-ES: Downscaled climate projections at 800m spatial resolution for the north central United States based on the Multivariate Adaptive Constructed Analog (MACA) method Electrical resistance data from the Willow-Whitehorse watersheds of southeast Oregon, USA, 2014-2016 Drought Risk and Adaptation in the Interior (DRAI) Database of Interviews with DOI/Tribal land managers in northwest Colorado, southwest South Dakota, and Wind River Reservation in Wyoming, 2013-2016 Streamflow Permanence Probability rasters, 2004-2011, Version 2.0 (PROSPER) Juvenile coho salmon stream survey data and associated analysis to estimate abundance and survival in Mason Creek, tributary of East Fork Lewis River, SW Washington, during summer of 2017 Stream Temperature Data in the Little Blitzen watershed of SE Oregon, 2009-15 SLR Projections, Bolinas, Calif., 2070-2110 Humboldt, California: Tidal Marsh Bathymetry Digital Elevation Model San Pablo, California: Tidal Marsh Digital Elevation Model Tijuana: Tidal Marsh Digital Elevation Model San Pablo, California: Tidal Marsh Bathymetry Digital Elevation Models Electrical resistance data from the Willow-Whitehorse watersheds of southeast Oregon, USA, 2014-2016 Streamflow Permanence Probability rasters, 2004-2011, Version 2.0 (PROSPER) Combined county-level drought incidence, damage, and census data Drought Risk and Adaptation in the Interior (DRAI) Database of Interviews with DOI/Tribal land managers in northwest Colorado, southwest South Dakota, and Wind River Reservation in Wyoming, 2013-2016 GFDL-ESM2M: Downscaled climate projections at 800m spatial resolution for the north central United States based on the Multivariate Adaptive Constructed Analog (MACA) method HadGEM2-ES: Downscaled climate projections at 800m spatial resolution for the north central United States based on the Multivariate Adaptive Constructed Analog (MACA) method TopoWx ("Topographical Weather/Climate") temperature dataset tile grid