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Deep-sea corals can create a highly complex, three-dimensional structure that facilitates sediment accumulation and influences adjacent sediment environments through altered hydrodynamic regimes. Infaunal communities adjacent to different coral types, including reef-building scleractinian corals and individual colonies of octocorals, are known to differ from background non-coral soft-sediment communities, often exhibiting higher macrofaunal densities and distinct community structure. However, the coral types have different morphologies, which may modify the adjacent sediment communities in discrete ways. Here we address two main questions: 1) how infaunal communities adjacent to deep-sea corals and their associated...
This dataset contains mercury concentrations and locations of wintering red-legged kittiwakes in the western subartic Pacific Ocean. These data support the following publication: Fleishman, AB, RA Orben, N Kokubun, A Will, R Paredes, JT Ackerman, A Takahashi, AS Kitaysky, and SA Shaffer. 2019. Wintering in the Western Subarctic Pacific increases mercury contamination of red-legged kittiwakes. Environmental Science and Technology, in press.
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These data have been collected as part of a cooperative project in between the U.S. Geological Survey, Colorado Springs Utilities, and Colorado Springs City Engineering. This project began in 2005 and has collected macroinvertebrate samples from Fountain Creek and its tributaries to monitor the biological condition of this watershed. Provided in this data release are Multimetric Index (MMI) values of aquatic macroinvertebrate assemblages using four different sampling methods. There are two subsets of these data included: (1) MMI values of macroinvertebrate data collected from 2010 to 2012 at 15 sites as part of an invertebrate sample method comparison Scientific Investigations Report (SIR) titled “Comparability...
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The dataset describes rangeland monitoring results from the Hanksville, UT (USA) area. Monitoring results consist of canopy cover of plant species and functional types according to ecological site group from 1967 to 2013. The study area is bordered on the north by the Wayne-Emery County line, on the west by Capitol Reef National Park, and on the south and east by the Colorado River, Glen Canyon National Recreation Area, and Canyonlands National Park. Cover was estimated every 1 to 5 years (except the last measurement that had a 12 year interval) from 1967 to 2013 at 36 permanently marked sites in 15 livestock grazing allotments/pastures. Canopy cover of perennial plant species was estimated to the nearest tenth...
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This dataset provides supporting information for the species distribution data used in the associated manuscript. Collections of five non-native fish species were made by a number of institutions, and several capture techniques were used. This dataset also includes number of individuals of each species captured at each locality.
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The Barrier Island Comprehensive Monitoring (BICM) program was developed by Louisiana’s Coastal Protection and Restoration Authority (CPRA) and is implemented as a component of the System Wide Assessment and Monitoring Program (SWAMP). The program uses both historical data and contemporary data collections to assess and monitor changes in the aerial and subaqueous extent of islands, habitat types, sediment texture and geotechnical properties, environmental processes, and vegetation composition. Examples of BICM datasets include still and video aerial photography for documenting shoreline changes, shoreline positions, habitat mapping, land change analyses, light detection and ranging (lidar) surveys for topographic...
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This study uses growth in vegetation during the monsoon season measured from LANDSAT imagery as a proxy for measured rainfall. NDVI values from 26 years of pre- and post-monsoon season Landsat imagery were derived across Yuma Proving Ground (YPG) in southwestern Arizona, USA. The LANDSAT imagery (1986-2011) was downloaded from USGS’s GlobeVis website (http://glovis.usgs.gov/). Change in NDVI was calculated within a set of 2,843 Riparian Area Polygons (RAPs) up to 1 km in length defined in ESRI ArcMap 10.2.
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Intracoelomic implantation of electronic tags has become a common method in fishery research, but rarely are fish examined by scientists after release to understand the extent that surgical incisions have healed. Walleye (Sander vitreus) are a valuable, highly-exploited fishery resource in the Laurentian Great Lakes. Here, fishery capture of walleye with internal acoustic transmitters combined with a high reward program provided multiple opportunities to examine photographs and quantify the status of surgical incisions. Walleye (n=926) from reef and river spawning populations in Lake Erie and Lake Huron were implanted with acoustic transmitters during spring spawning events from 2011 to 2016. Incisions were closed...
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The spring 2017 mainland sea otter count began on April 30, and although the shore-based counts were completed by May 12, 2017, the aerial counts were not completed until July 12, 2017. Overall viewing conditions this year were good, although not as good as conditions experienced during the 2016 spring census (View Score 2.4 versus 3.1, where 0=poor, 1=fair, 2=good, 3=very good, and 4=excellent). The surface canopies of kelp (Macrocystis sp.) were considered by most participants to be considerably below normal for this time of year in most areas of the mainland range. Sea otters along the mainland coast were surveyed from Pillar Point in San Mateo County in the north to Rincon Point in the south at the Santa Barbara/Ventura...
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Wetland restoration efforts conducted by the Coastal Wetlands Planning, Protection and Restoration Act (CWPPRA) in Louisiana rely on monitoring efforts to determine the efficacy of these efforts. The Coastwide Reference Monitoring System (CRMS) was developed to assist in a multiple-reference approach that uses aspects of hydrogeomorphic functional assessments and probabilistic sampling for monitoring. The CRMS program includes a suite of approximately 390 sites that encompass the range of hydrological and ecological conditions for each stratum. As part of CRMS, land and water classifications are created from Digital Orthophoto Quarter Quadrangles (DOQQs) approximately every three years at all CRMS sites. A DOQQ...
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The U.S. Geological Survey, Western Ecological Research Center (USGS-WERC) was requested by the Bureau of Ocean Energy Management (BOEM) to create a database for marine birds of the California Current System (CCS) that would allow quantification and species ranking regarding vulnerability to offshore wind energy infrastructure (OWEI). This was needed so that resource managers could evaluate potential impacts associated with siting and construction of OWEI within the California Current System section of the Pacific Offshore Continental Shelf, including California, Oregon, and Washington. Along with its accompanying Open File Report (OFR), this comprehensive database can be used (and modified or updated) to quantify...
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To improve our understanding of health and immune function in tortoises, we evaluated both standard blood diagnostic (body condition, hematologic, plasma biochemistry values, trace elements, plasma proteins, vitamin A levels) and gene transcription profiles in 21 adult tortoises (11 clinically abnormal; 10 clinically normal) from Clark County, NV, USA. Necropsy and histology evaluations from clinically abnormal tortoises revealed multiple physiological complications, with moderate to severe rhinitis or pneumonia being the primary cause of morbidity in all but one of the examined animals. Improved methods for health assessments are an important element of monitoring tortoise population recovery and can support the...
Carbon dioxide (CO2) is under consideration as a chemical fish deterrent at pinch points in rivers (e.g., inside locks) to reduce unwanted fish passage. This study evaluated the behavioral responses of invasive round goby (Neogobius melanostomus) to dissolved CO2 in laboratory tanks. The goal of this project was to quantify CO2 concentrations that modify round goby behavior. More specifically, avoidance behavior (voluntary response) and loss of equilibrium (involuntary response) were quantified across 5, 15, and 25°C water temperatures. These data can be used to inform future field testing of CO2 as an invasive fish deterrent. Spreadsheets include data that were used to evaluate the efficacy of carbon dioxide (CO2)...
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Data represent reports of capture of black carp by commercial fishers and biologists with information regarding size characteristics of collected individuals, dimensions of capture gears, and spatial and temporal distributions of captures.
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This dataset contains information from visual encounter surveys conducted between 2012 and 2016 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort in the Oregon Cascade Mountain Range. We surveyed 91 sites using a rotating frame design in the Klamath and Deschutes Basins, Oregon, which encompass most of the species' core extant range. Data consist of spotted frog counts aggregated by date, location, and life stage, as well as data on environmental conditions at the time of each survey.
The table provides all fish collected using two different electrofishing methods at Illinois River sites in 2012 and 2013. Length and weights were taken on most species and gender was taken from Silver Carp. Fishes were categorized whether they were netters (caught by nets) or jumpers (jumped in the boat while sampling) and only netters were used in analyses. Large numbers of shad were collected in 2013 and an additional spreadsheet includes abundance data in an aggregated form for those sites. The data is not sensitive/classified and there are no legal restrictions on who may obtain or use the data.
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The U.S. Geological Survey (USGS), working in cooperation with the U.S. Fish and Wildlife Service, installed a groundwater and vegetation monitoring network in a proposed wetland area east of the Rio Grande near Bernardo, New Mexico on the NM Boys and Girls Ranch, at a site now known as the Blue Heron Wildlife Preserve (BHWP). In September of 2016, baseline vegetation data were collected across the BHWP to assess vegetation changes with time in the proposed wetland area as it is established and maintained. A second round of vegetation surveys were conducted in August of 2018 for comparative purposes. The collection of this data will support conservation and management decisions.
(i) This dataset presents macroscopic and microscopic pathological findings and bacteriology of 178 tadpoles diagnosed with Severe Perkinsea Infections. (ii) Specimen were collected and submitted to the NWHC as part of mortality investigations and collection of specimen from apparently healthy populations as part of ongoing amphibian health monitoring. (iii) Necropsies and gross evaluation of carcasses were carried out under a dissecting microscope. (iv) Severe Perkinsea Infection was confirmed in each specimen by histological observation of pathological changes in tissues with presence of Perkinsea-like organisms in at least one organ, including brain, eyes, gastrointestinal tract, gills, heart, liver, lungs, kidney,...
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These data were compiled to evaluate the reproductive ecology of Agassiz's desert tortoises (Gopherus agassizzi) in the Sonoran Desert of California using two populations within Joshua Tree National Park, including five reproductive seasons that spanned 20 years (1997-1999, 2015-2016). Compared to their conspecifics inhabiting the Mojave Desert, the reproductive ecology of G. agassizii in the Sonoran Desert is understudied. Climatic variation between the two deserts can affect reproductive ecology, including fecundity and clutch phenology. Mature female tortoises (straight-line carapace length ≥ 20 cm) outfitted with radiotransmitters were located and X-radiographed approximately every 10-14 days during the reproductive...
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Data are time series of substrate grain size, remotely sensed water column turbidity, and measures of abundance (e.g., density, percent cover) of the nearshore subtidal (3-17 m depth) benthic community (vegetation, invertebrates, and fish) collected before (2008-2011) and during dam removal (2012-2014).


map background search result map search result map Rangeland Ecology Monitoring Data, Utah, 1967-2013 Mean of the Top Ten Percent of NDVI Values in the Yuma Proving Ground during Monsoon Season, 1986-2011 Oregon Spotted Frog (Rana pretiosa) Monitoring in the Oregon Cascades 2012-2016 Coastwide Reference Monitoring System (CRMS) 2015 land-water classifications Data for calculating population, collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure (ver. 2.0, June 2017) Distribution and status of five non-native fish species in the Tampa Bay drainage (USA), a hot spot for fish introductions-Data Blood variable data for clinically normal and clinically abnormal Mojave Desert tortoises (Gopherus agassizii) in 2013 Condition of Surgical Acoustic Tag Incisions in Recaptured Lake Erie Walleye (2011-2016) Annual California Sea Otter Census - 2017 Spring Census Summary Data collected in 2008-2014 to assess nearshore subtidal community responses to increased sediment load during removal of the Elwha River dams, Washington State, USA Sediment macrofaunal composition, sediment grain size, and taxa functional traits of multiple deep-sea coral habitats in the Gulf of Mexico, 2009-2014 Reproductive ecology data for female Agassiz's desert tortoises (Gopherus agassizii) in Joshua Tree National Park, USA Multimetric Index macroinvertebrate values from the Fountain Creek Basin, Colorado 2005 to 2016 Vegetation Community Data within a Proposed Wetland Area on the NM Boys and Girls Ranch near Bernardo, New Mexico Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data Louisiana Barrier Island Comprehensive Monitoring Program – 2008 habitat map, East Chenier Region (ver. 1.1, May 2020) Black Carp in North America: a description of range, habitats, time of year, and methods of reported captures Vegetation Community Data within a Proposed Wetland Area on the NM Boys and Girls Ranch near Bernardo, New Mexico Reproductive ecology data for female Agassiz's desert tortoises (Gopherus agassizii) in Joshua Tree National Park, USA Data collected in 2008-2014 to assess nearshore subtidal community responses to increased sediment load during removal of the Elwha River dams, Washington State, USA Distribution and status of five non-native fish species in the Tampa Bay drainage (USA), a hot spot for fish introductions-Data Mean of the Top Ten Percent of NDVI Values in the Yuma Proving Ground during Monsoon Season, 1986-2011 Oregon Spotted Frog (Rana pretiosa) Monitoring in the Oregon Cascades 2012-2016 Blood variable data for clinically normal and clinically abnormal Mojave Desert tortoises (Gopherus agassizii) in 2013 Condition of Surgical Acoustic Tag Incisions in Recaptured Lake Erie Walleye (2011-2016) Annual California Sea Otter Census - 2017 Spring Census Summary Sediment macrofaunal composition, sediment grain size, and taxa functional traits of multiple deep-sea coral habitats in the Gulf of Mexico, 2009-2014 Black Carp in North America: a description of range, habitats, time of year, and methods of reported captures Data for calculating population, collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure (ver. 2.0, June 2017) Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data