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Streams and rivers have a limited spatial extent, but are increasingly recognized as key components of regional biogeochemical cycles. The collective metabolic processing of organisms, known as ecosystem metabolism, is centrally important to nutrient cycling and carbon fluxes in these environments, but is poorly integrated into emerging biogeochemical concepts. This line of inquiry lags behind other aspects of regional biogeochemistry because of the lack of long-term, regionally-diverse studies of stream metabolism. With a few exceptions, metabolism studies have focused on small headwater catchments using short-term (days to weeks) observation. As a consequence, basic patterns and controls of this fundamental process,...