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This is an incomplete collection of track files produced during the MBM-AK TLSA molting goose survey flights. They reference latitude, longitude, and time in total seconds in the day. These files are called by R code (‘TMGSurvey_Master_2019.Rmd’ located in ‘GitHub_Annual_Report_Code’). Following review of this code, it appears as though these transcripts were not ultimately used in any way. Please consult ‘TMGSurvey_Master_2019.Rmd’ for additional context. Track file naming format is as follows: ‘TR[date][firstInitialLastNameOfObserver].csv’; HWilson refers to Heather Wilson while BShults refers to Brad Shults.
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ALPINE/TUNDRA, ANIMALS/VERTEBRATES, ARCTIC TUNDRA, BIOLOGICAL CLASSIFICATION, BIOLOGICAL RECORDS, All tags...
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Live tree species basal area from 2000 - 2009 for loblolly pine (Pinus taeda), longleaf pine (Pinus palustris), shortleaf pine (Pinus echinata), and slash pine (Pinus elliottii) clipped to the Gulf Coastal Plains and Ozarks LCC geography.Data were derived from the USFS live tree species basal area of the contiguious United States (2000-2009) Wilson, Barry T.; Lister, Andrew J.; Riemann, Rachel I.; Griffith, Douglas M. 2013. Live tree species basal area of the contiguous United States (2000-2009). Newtown Square, PA: USDA Forest Service, Northern Research Station. Abstract from html metadata for USFS live tree species basal area of the contiguious United States (2000-2009). This data product contains raster maps...
Categories: Data; Types: ArcGIS REST Map Service, ArcGIS Service Definition, Downloadable, GeoTIFF, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service, Raster; Tags: BIOSPHERE, BIOSPHERE, Basal Area, Conservation planning, Data, All tags...
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Description of condition index value scores for estuarine tidal marsh along and within 10 km of the GCPO LCC Gulf Coast subgeography. A series of raster calculations were used in a dichotomous decision-based framework to compile a per-pixel draft condition index value at a 10 m resolution for GCPO estuarine tidal marsh based on the number of configuration and condition endpoints met within each marsh pixel. Pixels not identified as a estuarine marsh but that were identified as having the potential to be marsh were given a score of 1, provided the pixels were not classified as developed. Potential estuarine tidal marsh pixels were derived from a combination of potential estuarine tidal marsh classes in the Landfire...
Categories: Data; Types: ArcGIS REST Map Service, ArcGIS Service Definition, Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: AQUATIC ECOSYSTEMS, AQUATIC ECOSYSTEMS, BIOSPHERE, BIOSPHERE, BIOSPHERE, All tags...
Mainstem big rivers were selected by the Gulf Coastal Plains and Ozarks (GCPO) Adaptation Science Management Team (ASMT) as a priority habitat system within the Mississippi Alluvial Valley subgeography. Mainstem big rivers are dominant feature on the GCPO landscape - eight of the largest ten rivers in the lower United States by discharge terminate in the GCPO. The goal of this dataset is to determine the amount, configuration and condition of key habitat features of the mainstem big rivers of the GCPO. The desired ecological state for priority habitat systems should characterize the least impacted condition – systems in this condition should be targets for maintenance/protection and the goal of restoration activities...
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Sampling Grassland habitats in Urban, Suburban and Rural areas of Central Texas using a modified GMIT protocol and Data Recorder Protocol provided a baseline of operations and tested various techniques and equipment prior to large-scale implementation. This 6-month effort combined the Urban Monarch project with testing field data collections techniques with those used by several partners (TPWD protocol) interested in determining best practices, tools and methodologies for evaluating and monitoring habitat for monarchs, other pollinators and grassland birds. Tablet data recorders were far superior that other recorders tested, and also were superior to cell phone applications. Several milk weed planted areas were...
This guidebook is intended to provide a practical overview of climate envelope modeling for conservation professionals and natural resource managers. The material is intended for people with little background or experience in climate envelope modeling who want to better understand and interpret models developed by others and the results generated by such models, or want to do some modeling themselves. This is not an exhaustive review of climate envelope modeling, but rather a brief introduction to some key concepts in the discipline. Here we treat selected topics from a practical perspective, using minimal jargon to explain and illustrate some of the many issues that one has to be aware of when using climate envelope...
Categories: Data; Tags: BIOSPHERE, BIOSPHERE, BIOSPHERE, BIOSPHERE, BIOSPHERE, All tags...
In Texas, the USFWS is currently reviewing 11 mussel species for ESA protection and several of these species (e.g., Cyclonaias petrina, Texas Pimpleback, and Lampsilis bracteata, Texas Fatmucket) have been the primary focus of controlled propagation by several federal hatcheries. To date, information on genetic diversity within and across known populations for these species is incomplete and so the justification for their controlled propagation is unclear, and a genetic management plan to guide propagation activities does not exist. These unknowns raise serious questions about whether any of the 11 proposed species are truly in need of and would benefit from controlled propagation. The overall goal of this project...
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A combination of altered fire regimes and pathogens has contributed towards densification and encroachment by shade-tolerant species into areas traditionally dominated by whitebark pine. As such, the CMP Hi5 Working Group technical team suggest canopy cover as a proxy for species encroachment. Stands with tree cover greater than 60% suggest successional species are outcompeting whitebark pine.
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This is the collection of raw data was collected during MBM-AK TLSA annual molting goose surveys. Partial quality control has been completed for these data: following each survey, the observer listened to their survey recording that documented counts along transects and then transcribed these findings into these raw datasets (‘raw_data’). The observer listened to their recording a second time in order to confirm that their transcriptions were correct. Further quality control and tidying was completed for these raw data using R scripts noted by the file extension ‘.Rmd’ located in the ‘GitHub_Annual_Report_Code’ folder. Ultimately, these scripts produced final datasets (‘final_data’) containing data used in annual...
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ALPINE/TUNDRA, ANIMALS/VERTEBRATES, ARCTIC TUNDRA, BIOLOGICAL CLASSIFICATION, BIOLOGICAL RECORDS, All tags...
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Standing dead trees, or snags, are an important habitat element in any forested system, and provide diurnal or seasonal shelter for many LCC priority species. The ISA landscape endpoint for snag density in upland hardwood woodland and forest systems targets one large (≥16” dbh) snag for every five acres of forest (or approximately ~0.2 large snags/acre), reflected by cavity-roosting habitat needs of the silver-haired bat (Lasionycteris noctivagans) and ample other avian, and mammalian species that require cavities in snags to carry out their life history. We used USFS imputed density of large (>16” dbh) snags data (USDA Forest Service Remote Sensing Applications Center, personal communication) extracted through...
Categories: Data; Types: ArcGIS REST Map Service, ArcGIS Service Definition, Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: BIOSPHERE, BIOSPHERE, Conservation planning, Data, EARTH SCIENCE, All tags...
The Gulf Coastal Plains and Ozarks (GCPO) region is, to a large extent, defined by its mainstem big rivers, with eight of the largest ten rivers (by discharge) in the lower U.S. terminating here. Those rivers are the Mississippi, Ohio, Missouri, Tennessee, Mobile, Atchafalaya, Red, and Arkansas. Whilethis assessment focuses on rivers of the MAV, the analysis has also been extended to big rivers throughout the GCPO.People have historically altered large river systems through the construction of levees and floodways, channelization, and dredging to support agriculture, navigation, commerce, and to provide greater stability and protection from flooding. Many large rivers in the GCPO are, in fact, part of theinland...
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R code that takes in the nest capture history data (chdata.csv), reformats it for model fitting in Program Mark via the R package RMark. A series of models of increasing complexity are fit and compared using AIC. Output is written to text files for each model but is generally not used or saved. Code can be run to generate model results and R workspaces/ object to inspect parameter estimates. The primary purpose of this code is to explore model structures for predicting detection and as an attempt to reproduce historically used parameter estimates in past nest plot reports (e.g., Fischer et al. 2017 and earlier). Results from ‘Model 7’ are most similar to detection estimates used in the past.
Categories: Data, Software; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, BIOLOGICAL CLASSIFICATION, BIOLOGICAL CLASSIFICATION, All tags...
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These are the observer names, observer initials, year, and unique observer number for all observe that collected data on the YKD nest plot project from 1985 to 2019. This data is used with the nest card data to in various ways, but primarily to calculate cumulative observer experience for nest detection rates. This file is also used for quality control and reconciling non-unique observer initials across years.
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, All tags...
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This R code (YKDsalinity_QC.R) is used to process the raw legacy salinity data for fixed and random plots (2006 - 2019) and produce the quality controlled legacy salinity data for analysis and sharing (YKDsalinity_QC.csv). Basic operations include transforming missing value to a common code, transforming other variables to match the data dictionary, and cleaning spatial location issues. Of special note is that this QC process discover significant error in location data due to a variety of reasons so the random plot centers are added to the data table and should be used for analysis. The code requires the raw data (“Official_YKD.SALINITY.DATA.MASTER.2020.csv”), a definition of the nest plot study area (“NestPlotStudyAreaBoundary.geojson”),...
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This is the YKD egg observation data reformatted from the nest card data (‘Nest_Cards_1985_2019_QC.csv’). The file eggs.R is used to produce this data set, and then this is further summarized into yearly stats on mean initiation and hatch dates to produce the file yearstats.csv.
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, All tags...
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From 1995 to 1999, a subset of nest plots were searched twice by field crews to estimate nest detection probability by mark-recapture methods. Over the five years, 30 plots were searched twice and over 2700 unique nests were found. From these data, nest detection probability is estimated using a Huggins-type mark recapture model where individual-level covariate effects of nest and observer attributes were estimated. These estimates are then used to predict nest detection rates in other years based on covariates of nests and observers. Nest detection rates are then applied to annual plot search to estimate nest populations for each species in the sampled area.
Categories: Data, Project; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, All tags...
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These heatmaps show a top 3 invasive animal stressor for riparian areas in the Chihuahuan Desert, as ranked by participants, and the concentration of participants who reported as working in each municipality or county who also voted for that stressor across the landscape. Symbology represents the percentage of participants with 0% = dark green, 0.0001 % - 24.99% = light green, 25% - 49.99% = yellow, 50% - 74.99% = orange, 75% - 100% = red. All counties and municipalities identified by participants as areas where they work were given a tally for each of the top 3 stressors that participants chose. Counties with a small number of participants were not adjusted for small sample size. These results were shared via a...
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The Gulf Coast Vulnerability Assessment (GCVA) used an expert opinion approach to qualitatively assess the vulnerability of four ecosystems: mangrove, oyster reef, tidal emergent marsh, and barrier islands, and a suite of wildlife species that depend on them. More than 50 individuals participated in the completion of the GCVA, facilitated via Ecosystem and Species Expert Teams. The GCVA made use of the Standardized Index of Vulnerability and Value Assessment (SIVVA) (Reece and Noss 2014) to provide an objective framework for evaluating vulnerability by guiding assessors through a series of questions related to the changes an ecosystem or species might experience due to climate change and other threats. Assessors...
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Alabama, BARRIER ISLANDS, BIOSPHERE, BIOSPHERE, Barrier Islands, All tags...
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The decrease in the number of monarch butterflies in eastern populations of the United States has led to a Species Status Assessment by the US Fish and Wildlife Service. This project sought to increase the sampling of milkweed within Texas, through which the eastern population travels during its northern and southern migrations. The goals of this project were 1) to complete milkweed (and monarch egg and larvae) surveys, 2) coordinate with other agencies working on efforts regarding monarch butterflies, and 3) to train students. For goal one, we proposed to use the GRTS sampling points to identify and select sites in eight counties in Texas, however because of the location and landowner issues of the random GRTS...
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This geopackage contains the density strata that were used to create the Alaska Arctic Coastal Plain Aerial Breeding Pair Survey four-year rotating panel design. This file was derived from a mid-1980’s ArcInfo coverage for the North Slope Eider Survey that was produced through the visual interpretation of 1:250,000-scale LANDSAT imagery and the known nesting density waterfowl in the area.


map background search result map search result map Live Pine Tree Species Basal Area (2000 -2009) in the GCPO LCC (Loblolly, Longleaf, Shortleaf, Slash) Barcode Value for GCPO LCC Estuarine Tidal Marsh Density of large snags (>16") per acre (GCPO geography) Developing Regional Partnerships for the Gulf Coast Prairie Landscape Conservation Cooperative - Urban Monarch Technicians Gulf Coast Vulnerability Assessment Final Report: Monarch/Pollinator Use Monitor in Texas Invasive Animal Stressors for Riparian Areas in the Chihuahuan Desert Alaska Arctic Coastal Plain Aerial Breeding Pair Survey Design Strata Geodata Whitebark Pine- Interspecific Competition Teshekpuk Lake Alaska Molting Goose Survey Track Files Teshekpuk Lake Alaska Molting Goose Raw Aerial Survey Data Alaska Yukon Delta Detection Model Fitting Code Using R and RMark Alaska Yukon Delta Double Observer Nest Plot Detection Alaska Yukon Delta Nest Plot Survey Observer Names 1985 - 2019 Alaska Yukon Delta Salinity Quality Control R Code Alaska Yukon Delta Tidy Egg Data 1985 - 2019 Developing Regional Partnerships for the Gulf Coast Prairie Landscape Conservation Cooperative - Urban Monarch Technicians Teshekpuk Lake Alaska Molting Goose Survey Track Files Teshekpuk Lake Alaska Molting Goose Raw Aerial Survey Data Alaska Yukon Delta Detection Model Fitting Code Using R and RMark Alaska Yukon Delta Double Observer Nest Plot Detection Alaska Yukon Delta Nest Plot Survey Observer Names 1985 - 2019 Alaska Yukon Delta Salinity Quality Control R Code Alaska Yukon Delta Tidy Egg Data 1985 - 2019 Whitebark Pine- Interspecific Competition Alaska Arctic Coastal Plain Aerial Breeding Pair Survey Design Strata Geodata Invasive Animal Stressors for Riparian Areas in the Chihuahuan Desert Gulf Coast Vulnerability Assessment Barcode Value for GCPO LCC Estuarine Tidal Marsh Final Report: Monarch/Pollinator Use Monitor in Texas Density of large snags (>16") per acre (GCPO geography) Live Pine Tree Species Basal Area (2000 -2009) in the GCPO LCC (Loblolly, Longleaf, Shortleaf, Slash)