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The dataset includes Escherichia coli concentrations collected by Isleta Pueblo in the Middle Rio Grande in Albuquerque, NM, from 2017 to 2020.
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The United States Geological Survey’s (USGS) New Jersey Water Science Center, in coordination with the Delaware River Basin Commission (DRBC) deployed a novel bacterial water-quality monitor, the Fluidion Alert V2 (Fluidion), in the Delaware River at Pyne Poynt Park in Camden County, New Jersey. Following United States Environmental Protection Agency (EPA) recreational water quality criteria, DRBC has been evaluating fecal indicator bacteria (FIB) abundance along Lower Delaware River at Pyne Poynt Park in support of primary use recreation (DRBC, 2022). The EPA recreation criteria establish acceptable levels of FIB abundance for primary contact recreation, such as swimming, and secondary contact recreation, such...
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This data set contains continuous water-surface elevation and water-quality (temperature, specific conductance, salinity, and turbidity) data recorded at 6- and 15-minute intervals, respectively, from two sites in the Bronx on the Harlem River -- Roberto Clemente State Park and Mill Pond Park. Water elevation was monitored every second to detect changes indicative of boat wakes expected to resuspend bed sediment from nearby alcoves. Boat wake detection triggered the collection of 1-second interval water elevation and 1-minute interval turbidity data. In addition to continuous data, grab samples for fecal indicator bacteria (Enterococci) and total suspended solids were collected weekly from - March to September,...
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These datasets are outputs from LOADEST regression models for estimating Escherichia coli (E. coli) concentration in the Missouri River at four sites near Omaha, Nebraska. The datasets described by this metadata are yearly (both water year, Mar - Nov, and recreation season, May - Sept) and daily E. coli concentrations predicted using developed LOADEST models. The development of LOADEST regression models at each of the four sites is described in Densmore and others, 2020. These data sets are in .csv format. The files are named Yearly_Ecoli_Predictions.csv and Daily_Ecoli_Predictions.csv. Sites include Missouri River at NP Dodge Park at Omaha, Nebr. (USGS Site ID 412126095565201), Missouri River at Freedom Park Omaha,...
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This dataset contains data tables of laboratory quality-control data associated with environmental samples analyzed for microbiological constituents at the Ohio Water Microbiology Laboratory of the U.S. Geological Survey (USGS) during federal fiscal years 2012-2017 (October 1, 2011 through September 30, 2017). The environmental samples were collected across the United States by the USGS National Water Quality Assessment Project and other projects in Water Science Centers. The microbiological constituents include total coliforms, Escherichia coli (E. coli), enterococci, coliphage (F-specific and somatic), aerobic endospores, and actinomycetes. These quality-control data can be used to assess the quality of microbiological...
* 1 Soils are one of the last great frontiers for biodiversity research and are home to an extraordinary range of microbial and animal groups. Biological activities in soils drive many of the key ecosystem processes that govern the global system, especially in the cycling of elements such as carbon, nitrogen and phosphorus. * 2 We cannot currently make firm statements about the scale of biodiversity in soils, or about the roles played by soil organisms in the transformations of organic materials that underlie those cycles. The recent UK Soil Biodiversity Programme (SBP) has brought a unique concentration of researchers to bear on a single soil in Scotland, and has generated a large amount of data concerning biodiversity,...
Bromus tectorum is an exotic annual grass that currently dominates many western U.S. semi-arid ecosystems, and the effects of this grass on ecosystems in general, and soil biota specifically, are unknown. Bromus recently invaded two ungrazed and un-burned perennial bunchgrass communities in southeastern Utah. This study compared the soil food-web structure of the two native grassland associations (Stipa [S] and Hilaria [H]), with and without the presence of Bromus. Perennial grass and total vascular-plant cover were higher in S than in H plots, while quantities of ground litter were similar. Distribution of live and dead plant material was highly clumped in S and fairly homogenous in H. Soil food-web structure was...
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Bromus tectorum is an exotic annual grass that currently dominates many western U.S. semi-arid ecosystems, and the effects of this grass on ecosystems in general, and soil biota specifically, are unknown. Bromus recently invaded two ungrazed and un-burned perennial bunchgrass communities in southeastern Utah. This study compared the soil food-web structure of the two native grassland associations (Stipa [S] and Hilaria [H]), with and without the presence of Bromus. Perennial grass and total vascular-plant cover were higher in S than in H plots, while quantities of ground litter were similar. Distribution of live and dead plant material was highly clumped in S and fairly homogenous in H. Soil food-web structure was...
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Concerns exist that the degradation of water quality in Salado Creek near Salado, Texas could adversely affect recreational uses and harm salamander populations that live in and near springs that discharge into the stream. Salado is part of the rapidly growing Killeen-Temple-Fort Hood area; land-use changes in the Salado Creek watershed could adversely affect water quality in Salado Creek. Streamflow in Salado Creek is generally derived from the Salado Springs complex during low-flow conditions (dry weather) and from the springs and surface runoff during high-flow conditions (wet weather). A better understanding of the types of waste (human, animal, or both) that may be entering the stream and springs is needed...
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A National Park Service Partnership Program project was conducted in 2017 - 2019 on water quality parameters up-stream and downstream of a confined animal feeding operation on a Buffalo National River tributary (Big Creek). Monthly, over a period of 20 months, patterns of nutrients in water (nitrogen and phosphorus), periphyton (chlorophyll a and algal assemblages), and bacterial responses (viable bacterial densities, total bacterial counts, and live bacterial metabolic activity) were measured at six sites along Buffalo National River. Heterotrophic bacteria were concentrated from the water samples. The metabolic activity of heterotrophic bacteria was determined by fluorescent staining of enzyme (esterase) activity...
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We investigated the cultureable bacterial communities in the native freshwater mussel faunal in the Clinch River, VA/TN during mussel mortality events in 2018, 2019 and 2020 and examine the spatial and temporal distribution of bacterial genera among Pheasantshells and six other unionid species.
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Plant roots have the best-understood mutualisms with microbes, but leaf and bract cell endosymbiosis have not been previously reported. Leaf and bract cells of more than 30 species in 18 families of seed plants were surveyed for the presence of intracellular bacteria and several experiments were designed to find and analyze nutrient exchanges between bacteria and plant cells. This dataset contains the results of 1) histochemical analyses to detect hormones, superoxide, and nitrogenous chemicals around bacteria within plant leaf and bract cells, 2) experiments to assess the differential absorption of isotopic nitrogen into plants, and 3) genetic analysis of bacteria isolated from plant material.
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Water-quality data were collected by the Providence Water Supply Board (PWSB) from tributaries in the Scituate Reservoir drainage area, October 2015 through September 2016 (water year 2016). These data were used to calculate instantaneous loads and yields of constituents in a report by the U.S. Geological Survey. Water-quality samples were collected by the PWSB either monthly or quarterly at fixed stations on 34 tributaries in the Scituate Reservoir drainage area. Water-quality samples were collected following a strict sampling schedule so that water-quality samples would be representative of various weather conditions. Samples were analyzed at the PWSB water-quality laboratory at the P.J. Holton Water Purification...
Populations of chemotactic bacteria are able to sense and respond to chemical gradients in their surroundings and direct their migration toward increasing concentrations of chemicals that they perceive to be beneficial to their survival. It has been suggested that this phenomenon may facilitate bioremediation processes by bringing bacteria into closer proximity to the chemical contaminants that they degrade. To determine the significance of chemotaxis in these processes it is necessary to quantify the magnitude of the response and compare it to other groundwater processes that affect the fate and transport of bacteria. We present a systematic approach toward quantifying the chemotactic response of bacteria in laboratory...
The effects of a dilute (ionic strength = 5 × 10−3 M) plume of treated sewage, with elevated levels (3.9 mg/L) of dissolved organic carbon (DOC), upon the pH-dependency and magnitude of bacterial transport through an iron-laden, quartz sand aquifer (Cape Cod, MA) were evaluated using sets of replicate, static minicolumns. Compared with uncontaminated groundwater, the plume chemistry diminished bacterial attachment under mildly acidic (pH 5.0–6.5) in-situ conditions, in spite of the 5-fold increase in ionic strength and substantively enhanced attachment under more alkaline conditions. The effects of the hydrophobic neutral and total fractions of the plume DOC; modest concentrations of fulvic and humic acids (1.5...
The effects of a dilute (ionic strength = 5 × 10−3 M) plume of treated sewage, with elevated levels (3.9 mg/L) of dissolved organic carbon (DOC), upon the pH-dependency and magnitude of bacterial transport through an iron-laden, quartz sand aquifer (Cape Cod, MA) were evaluated using sets of replicate, static minicolumns. Compared with uncontaminated groundwater, the plume chemistry diminished bacterial attachment under mildly acidic (pH 5.0–6.5) in-situ conditions, in spite of the 5-fold increase in ionic strength and substantively enhanced attachment under more alkaline conditions. The effects of the hydrophobic neutral and total fractions of the plume DOC; modest concentrations of fulvic and humic acids (1.5...
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The data were gathered as a preliminary assessment of soil microbiology and conditions in selected urban stormwater best management practices (BMPs) in Clarksburg, MD. Four bioretention facilities (BF), four dry ponds (DP), and four surface sand filters (SSF) were selected. Three samples were taken from each BMP (a single sample from one dry swale (DS) was also collected). BMPs were selected based on their position along various stormwater treatment trains. Soil samples were taken after precipitation events in the summer of 2015 and analyzed for various soil chemistry parameters and microbial taxonomic profiling.
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A quantitative PCR (qPCR) assay was developed to detect nuclear inclusion X (NIX) in Pacific razor clams, and assay specificity was confirmed by chromogenic in situ hybridization (CISH). Both tests were applied to evaluate NIX infections in wild Pacific razor clams collected during spring 2019. Consistent with results from earlier histopathological assessments, qPCR and CISH indicated 100% prevalence in razor clams from two Washington beaches and 0% prevalence from two Alaskan beaches.
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Jointly managed by multiple states and the federal government, there are many ongoing efforts to characterize and understand water quality in the Delaware River Basin (DRB). Many State, Federal and non-profit organizations have collected surface-water-quality samples across the DRB for decades and many of these data are available through the National Water Quality Monitoring Council's Water Quality Portal (WQP). In this data release, WQP data in the DRB were harmonized, meaning that they were processed to create a clean and readily usable dataset. This harmonization processing included the synthesis of parameter names and fractions, the condensation of remarks and other data qualifiers, the resolution of duplicate...
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This dataset describes the identification of phytoplankton to the lowest taxonomic level (typically species), as well as abundance (density) and biovolume from grab samples collected from Lake Michigan at Jackson Park at Hyde Park, Illinois and Lake Michigan at Jeorse Park at Gary, Indiana.


map background search result map search result map Soil Biota in an Ungrazed Grassland: Response to Annual Grass (Bromus tectorum) Invasion Laboratory quality-control data associated with samples analyzed for microbiological constituents at the Ohio Water Microbiology Laboratory, 2012-2017 Water quality data from the Providence Water Supply Board for tributary streams to the Scituate Reservoir, water year 2016 Nutrients, Escherichia coli, and microbial source tracking markers in surface-water and known-source samples collected in Salado Creek and its watershed near Salado, Texas, 2018 Phytoplankton taxonomy, abundance, and biovolume from two urban beaches on Southern and Western Lake Michigan, 2016-2017 Modeling Escherichia coli in the Missouri River near Omaha, Nebraska, 2012-16: Model Outputs Characteristics of Bacteria and Water Quality along the Buffalo National River 2017-2018 Soil characteristics and microbial taxonomy in selected urban stormwater best management practices (BMPs) in Clarksburg, MD, 2015 Multisource surface-water-quality data for the Delaware River Basin Nuclear inclusion X testing of Pacific Razor clams from select locations in Washington and Alaska Continuous Water Quality, Suspended Solids, and Enterococci Data from the Harlem River, Bronx, New York, Jan 2021- Sept 2021 Histochemical study of nitrogen-transfer endosymbiosis Bacteria identified in freshwater mussels in the Clinch River, VA, associated with mortality events from 2018 to 2020 Urban Waters Federal Partnership: Novel bacteria monitoring technology in support of recreational water quality monitoring in the Lower Delaware River Escherichia coli concentrations in the Middle Rio Grande collected by Isleta Pueblo, Albuquerque, NM, 2017-2020 Escherichia coli concentrations in the Middle Rio Grande collected by Isleta Pueblo, Albuquerque, NM, 2017-2020 Continuous Water Quality, Suspended Solids, and Enterococci Data from the Harlem River, Bronx, New York, Jan 2021- Sept 2021 Urban Waters Federal Partnership: Novel bacteria monitoring technology in support of recreational water quality monitoring in the Lower Delaware River Phytoplankton taxonomy, abundance, and biovolume from two urban beaches on Southern and Western Lake Michigan, 2016-2017 Water quality data from the Providence Water Supply Board for tributary streams to the Scituate Reservoir, water year 2016 Modeling Escherichia coli in the Missouri River near Omaha, Nebraska, 2012-16: Model Outputs Nutrients, Escherichia coli, and microbial source tracking markers in surface-water and known-source samples collected in Salado Creek and its watershed near Salado, Texas, 2018 Soil characteristics and microbial taxonomy in selected urban stormwater best management practices (BMPs) in Clarksburg, MD, 2015 Soil Biota in an Ungrazed Grassland: Response to Annual Grass (Bromus tectorum) Invasion Multisource surface-water-quality data for the Delaware River Basin Laboratory quality-control data associated with samples analyzed for microbiological constituents at the Ohio Water Microbiology Laboratory, 2012-2017 Histochemical study of nitrogen-transfer endosymbiosis Nuclear inclusion X testing of Pacific Razor clams from select locations in Washington and Alaska