Filters: Tags: Benthos (X) > partyWithName: U.S. Geological Survey (X)
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Data are time series of substrate grain size, remotely sensed water column turbidity, and measures of abundance (e.g., density, percent cover) of the nearshore subtidal (3-17 m depth) benthic community (vegetation, invertebrates, and fish) collected before (2008-2011) and during dam removal (2012-2014).
Deep-sea corals can create a highly complex, three-dimensional structure that facilitates sediment accumulation and influences adjacent sediment environments through altered hydrodynamic regimes. Infaunal communities adjacent to different coral types, including reef-building scleractinian corals and individual colonies of octocorals, are known to differ from background non-coral soft-sediment communities, often exhibiting higher macrofaunal densities and distinct community structure. However, the coral types have different morphologies, which may modify the adjacent sediment communities in discrete ways. Here we address two main questions: 1) how infaunal communities adjacent to deep-sea corals and their associated...
Deep-sea corals create complex habitats that support distinct sediment communities. Several deep-sea coral habitats were impacted by the 2010 Deepwater Horizon spill, and recovery of associated sediment communities may take several years. While spill-associated organic enrichment may lead to increased abundances of tolerant taxa, toxic effects of the spill may lead to declines in sensitive groups. However, temporal variability in coral-associated sediment macrofauna is unknown and represents an important consideration for post-spill community assessments. Here we examine how the macrofaunal communities change over time at impacted and reference sites. From 2010 to 2016, we examined macrofaunal communities at multiple...
Benthic invertebrate communities are monitored because the composition of those communities can affect and be affected by the water quality of an aquatic system. Benthic communities use and sometimes regulate the cycling of essential elements (for example, carbon). Benthic invertebrate taxa may also indicate acute and chronic stressors in an environment because they accumulate contaminants and can respond – sometimes dramatically - to oligotrophic and eutrophic conditions. Benthic communities affect water quality by grazing pelagic food resources and increasing the rate of nutrient regeneration through feeding and bioturbating sediments. South San Francisco Bay is a system dependent on phytoplankton as the base...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Alviso Slough,
Annelids,
Aquatic Biology,
Benthic Ecosystems,
Benthos,
Cladophora biomass and supporting data collected in the Great Lakes, 2018 (ver. 1.1, September 2020)
Note: An error was discovered in the BenthicBiomas Table, mostly in designation of BDLs and zeros. Data are undergoing further QC and the corrected dataset will be posted soon. This dataset records Cladophora and associated submerged aquatic vegetation (SAV) biomass collected approximately monthly during the growing season of 2018 at stations located along the U.S. shoreline of Lakes Michigan, Huron, Erie, and Ontario. It also records a variety of supporting data collected at Cladophora measurement stations. These supporting data include: - seasonal time series of light, currents, wave action, temperature, specific conductivity, turbidity, pH, phycocyanin, chlorophyll, and dissolved oxygen from moored sensors...
Categories: Data,
Data Release - Revised;
Tags: Aquatic Biology,
CTD measurement,
Ecology,
Great Lakes Region,
Lake Erie,
Stable isotope data of fauna, particulate organic matter, and rocks collected during the 2018 research cruise aboard the NOAA Ship Bell M. Shimada that examined benthic communities off the western U.S. coast.
Categories: Data;
Tags: Ecology,
Pacific Ocean,
USGS Science Data Catalog (SDC),
benthic ecosystems,
benthos,
Between 1900 and 1932, a copper (Cu) mine operated near Gay, Michigan, along the shore of Lake Superior, discharged approximately 22.8 million metric tons of waste material known as ‘stamp sands’ (SS) to a nearby beach. This pile of SS has migrated via wind and rain along the beaches in northern Grand Traverse Bay and into Buffalo Reef, an important spawning area for Lake Trout and Lake Whitefish. During their first summer, these newly spawned fish consume benthic invertebrates and zooplankton in nearby beach habitats. SS contain elevated concentrations of metals (especially Cu) that are toxic to many invertebrate taxa, and studies have observed very few benthic taxa in areas with very high SS. Here, we sampled...
Categories: Data;
Tags: Aquatic Biology,
Keweenaw Bay NE,
Lake Superior,
Michigan,
Southcentral Lake Superior,
Data to support the site characterization of locations sampled along the continental shelf and slope of the western U.S. coast off Washington, Oregon and California during the EXPRESS RL1905 expedition in 2019. Data consisted of tissue samples from fauna, sediments and particulate organic matter. These samples were analyzed for stable carbon and nitrogen isotopes to examine food web ecology. Additional observational data were collected through video analyses with efforts focused on documenting counts of fauna other than corals, sponges and fishes, as well as general habitat characteristics.
This data release contains cyanotoxin concentrations for microcystins, cylindrospermopsins, anatoxins, and saxitoxins assessed using Enzyme-Linked Immunosorbent Assays (ELISA) on 363 samples collected from 82 surface-water sites located in the Cascade Range in Oregon, and eight sites located outside of the Oregon Cascade Range in Washington and California, during 2016-2020. Three sample types were assessed: 1) benthic colonies and mats of cyanobacteria (n=109), 2) plankton net tows (n=90), and 3) Solid Phase Adsorption Toxin Tracking samplers (SPATTs)(n=164).
Categories: Data;
Tags: Anderson Lake,
Aquatic Biology,
California,
Clackamas River,
Coast Fork Willamette River,
This is a tabular data set that includes intensity and saturation measurements of benthic invertebrates, sample residue, and preservative from samples stained with three fluorescent dyes for the development of a fluorescent staining method to enhance picking efficiency. This data set also contains data evaluating a selected fluorescent method's effects on picking efficiency and comparison to standard non-fluorescent methods for sorting benthic invertebrates.
Categories: Data;
Types: Citation;
Tags: Michigan,
USGS Science Data Catalog (SDC),
Washtenaw,
benthos,
environment,
These data are comprised of measurements of elements (e.g., uranium, cobalt, nickel, copper, zinc, cadmium, lead, etc.), major anions (chloride, nitrite+nitrate as nitrogen, sulfate, etc.), organic carbon, and general water quality characteristics in Pinyon Plain Mine containment pond water, invertebrate, vegetation and sediment samples, collected in calendar year 2022.
This dataset records Cladophora and associated submerged aquatic vegetation (SAV) biomass collected approximately monthly during the growing season starting in 2018 at stations located along the U.S. shoreline of Lakes Michigan, Huron, Erie, and Ontario. It also records a variety of supporting data collected at Cladophora measurement stations. These supporting data include: - seasonal time series of light, water currents, wave action, temperature, specific conductivity, turbidity, pH, phycocyanin, chlorophyll, and dissolved oxygen from moored sensors at a subset of stations; - measurements of Secchi disk depth and water chemistry; - water column profiles of temperature, specific conductivity, turbidity, pH, phycocyanin,...
Dataset of sediment geochemistry, water column parameters, and macrofaunal functional traits associated with sediment communities collected in Norfolk Canyon axis, hard substrates, and adjacent slope habitats in 2012 and 2013.
Data are time series of substrate grain size, vertical relief, and measures of abundance (e.g., density, percent cover) of the nearshore subtidal (5-16 m depth) benthic community (vegetation, invertebrates, and fish) collected before (2008-2011), during (2012-2014), and after dam removal (2015-2022).
Trace-metal concentrations in sediment and in the clam Limecola petalum (World Register of Marine Species, 2020; formerly reported as Macoma balthica and M. petalum), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat located 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in south San Francisco Bay, California. This report includes data collected by the U.S. Geological Survey (USGS) starting in January 2019. These data append to long-term datasets extending back to 1974. This dataset supports the City of Palo Alto’s Near-Field Receiving-Water Monitoring Program, initiated in 1994. This data release is presented...
This part of DS 781 presents data for the habitat map of the seafloor of the Offshore of Aptos map area, California. The vector data file is included in "Habitat_OffshoreAptos.zip," which is accessible from https://doi.org/10.5066/F7K35RQB. These data accompany the pamphlet and map sheets of Cochrane, G.R., Johnson, S.Y., Dartnell, P., Greene, H.G., Erdey, M.D, Dieter, B.E., Golden, N.E., Hartwell, S.R., Ritchie, A.C., Kvitek, r.G., Maier, K.L., Endris, C.A., Davenport, C.W., Watt, J.T., Sliter, R.W., Finlayson, D.P., and Krigsman, L.M., (G.R. Cochrane and S.A. Cochran, eds.), 2016, California State Waters Map Series—Offshore of Aptos, California: U.S. Geological Survey Open-File Report 2016–1025, 43 p., 10 sheets,...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Aptos,
CMHRP,
Coastal and Marine Hazards and Resources Program,
Continental/Island Shelf,
Fisheries,
Benthic Communities as Mediators of Water Quality in Lower San Francisco Bay, California (2012-2019)
San Francisco Bay and Estuary is largely urbanized and developed, and the southern bay is the most urbanized with many sources of nutrients, many concerns that the system might become eutrophic, and many questions about how South Bay has maintained its relatively good health. The hypotheses for why South Bay is not eutrophic, where other bays have not been so fortunate, include high bivalve grazing that limits net phytoplankton growth and high turbidity which also limits the phytoplankton growth rate. Understanding the bivalve grazing rates in the south bay includes the necessity of understanding temporal and spatial distributions of bivalves. Despite the critical need to understand all controls on eutrophication,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Biomass,
Bivalves,
Lower San Francisco Bay,
USGS Science Data Catalog (SDC),
benthic community,
Diet contents of Deepwater Sculpin (Myoxocephalus thompsonii) were identified, enumerated, and measured to monitor the changes in the offshore benthic fish community within Lake Huron. Collections were made using a 21-m headrope with a 4.76mm square mesh cod-end with 10 minute contour trawl tows.. Deepwater Sculpin collected from the USGS fall forage (2003-2005 and 2010-2014) were counted and weighed en masse on board research vessel. Individual weights (nearest 0.001g) and measurements (0.1mm) were conducted in laboratory setting. Stomachs were extracted in laboratory setting (from esophogus to pyloric ceaca). Stomachs were stored in ethanol for later dissection. Stomach contents were removed in petri dish. All...
Submarine canyons are morphologically complex systems, acting as major conduits of organic matter along continental shelves, promoting gradients in food resources, habitat heterogeneity, and areas of sediment resuspension and deposition. Often environmental conditions within canyons can be highly distinct, particularly in different parts of the canyon and in contrast to adjacent slopes. Here we examine how biogeochemical drivers shape the differences between canyon and slope infaunal communities in Baltimore and Norfolk Canyons in the U.S. Mid-Atlantic Region. Specific comparisons included macrofaunal communities in Norfolk canyons and adjacent slope, hard substrate associated macrofaunal communities in Norfolk...
Categories: Data;
Types: Citation;
Tags: Atlantic Ocean,
Baltimore Canyon,
Benthos,
Meiobenthos,
Norfolk Canyon,
Chemosynthetic ecosystems in the Gulf of Mexico (GOM) support dense communities of seep megafaunal invertebrates that rely on endosymbiotic bacteria for nutrition. Distinct infaunal communities are associated with the biogenic habitats created by seep biota, where habitat heterogeneity and sediment geochemistry influence local macrofaunal community structure. Here we examine the variance in infaunal communities in the GOM with respect to depth, sediment geochemistry parameters, and distance to known seep habitats. Habitats were mapped based on ROV video of the seafloor. Samples were collected from three sites (AC601, GC852, and AT340) via box core in 2007 and processed for macrofauna and environmental characteristics....
Categories: Data;
Tags: Benthos,
Gulf of Mexico,
USGS Science Data Catalog (SDC),
biota,
chemosynthetic,
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