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The SRLCC provided funds to the states of Arizona and New Mexico to support development of the states Crucial Habitat Assessment Tools (CHATs) which provide a decision support system to better incorporate wildlife values, sensitive animals and plants, and important ecosystem features into land use decision-making to reduce conflicts and surprises.Several states have released wildlife mapping tools that are the foundation for displaying crucial wildlife and corridor information. The state and regional CHATs are non-regulatory, and give project planners and the general public access to credible scientific data on a broad scale for use in project analysis, siting and planning. This includes large-scale development...
Categories: Data, Project; Types: ArcGIS REST Map Service, ArcGIS Service Definition, Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: AZ-01, AZ-02, AZ-03, AZ-04, AZ-05, All tags...
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This data represents an assessment of forest composition used in the ecological assessment of upland hardwood systems by the GCPO LCC. We used a combination of remote sensing products including 2011 National Land Cover Database (NLCD) forest classes and the 2011 MAV forest classification layer produced by the Lower Mississippi Valley Joint Venture to delineate patches of all forest types in the GCPO LCC. We used NLCD as the primary data source when assessing forests outside the GCPO LCC MAV subgeography, and the LMVJV forest classification as the primary data source for forest assessment within the MAV. NLCD was developed using 2011 Landsat TM imagery, with forest classes including only areas with trees exceeding...
Categories: Data; Types: ArcGIS REST Map Service, ArcGIS Service Definition, Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: BIOSPHERE, BIOSPHERE, Conservation planning, Data, EARTH SCIENCE, All tags...
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This is the GeoPackage (“TMG_AdditionalArea_Trans.gpkg”) that contains the layer (“main.TMG_Area_Trans”) depicting the spatial extent of the four Additional Survey Area transects that are surveyed during the annual MBM-AK TLSA molting goose aerial surveys. This GeoPackage (NAD83; ESPG: 3338) was created by Michael Swain in August 2021 and subsequently emailed to Maggie Harings. It includes waterbody units, waterbody types, and waterbody perimeter as well as their areas.Transects do not exist for Cape Simpson as this area is adequately assessed by conducting aerial surveys for lakes only. Piasuk River Delta area is surveyed using a combination of aerial lake surveys and transects. Colville River Delta and Atigaru...
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ALPINE/TUNDRA, ANIMALS/VERTEBRATES, ARCTIC TUNDRA, BIOLOGICAL CLASSIFICATION, BIOLOGICAL RECORDS, All tags...
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This is the quality controlled YKD salinity data for fixed and random plots 2006 - 2019. These data are quality controlled using the R code in the file ‘YKDsalinity_QC.R’ to produce the data used for analysis and sharing (‘YKDsalinity_QC.R’). These data should be what is used for analysis or distributed on request.
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This R code (PrepData.R) is used to process the quality controlled legacy nest card data (1985 - 2019) together with the observer names data to produce a capture history data set plot searched twice in 1995 to 1999. Second searches of plot are defined by the PLOTTYPE = “R2” in the nest cards data. Matches are define by the PREVIOUSOBS and PREVIOUSNEST field in the nest card data set but a large number of quality control issue arise in this process and are resolve as detailed in this code. This code produces a data file “chdata.csv” that defines the capture history for each nest and is used as input to Program MARK and JAGS for model fitting and detection estimation. Basic operations include reconciling species and...
Categories: Data, Software; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, All tags...
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Combined population indices of ducks and loons (YKD) and geese and swans (YKG) for the USFWS Region Migratory Bird Management Alaska Yukon-Kuskokwim Delta Aerial Survey study area in a combined csv format. The survey consists of low-level aerial observations of waterfowl on a stratified strip transect design. The resulting data frame is several indices combined over observers (or single observer in years where estimates were not combined) and calculated using a standard ratio estimator. These data are output from the R package AKaerial and are also available within that package, see https://github.com/USFWS/AKaerial.
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This is an incomplete collection of track files produced during the MBM-AK TLSA molting goose survey flights. They reference latitude, longitude, and time in total seconds in the day. These files are called by R code (‘TMGSurvey_Master_2019.Rmd’ located in ‘GitHub_Annual_Report_Code’). Following review of this code, it appears as though these transcripts were not ultimately used in any way. Please consult ‘TMGSurvey_Master_2019.Rmd’ for additional context. Track file naming format is as follows: ‘TR[date][firstInitialLastNameOfObserver].csv’; HWilson refers to Heather Wilson while BShults refers to Brad Shults.
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ALPINE/TUNDRA, ANIMALS/VERTEBRATES, ARCTIC TUNDRA, BIOLOGICAL CLASSIFICATION, BIOLOGICAL RECORDS, All tags...
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This R code (YKDsalinity_QC.R) is used to process the raw legacy salinity data for fixed and random plots (2006 - 2019) and produce the quality controlled legacy salinity data for analysis and sharing (YKDsalinity_QC.csv). Basic operations include transforming missing value to a common code, transforming other variables to match the data dictionary, and cleaning spatial location issues. Of special note is that this QC process discover significant error in location data due to a variety of reasons so the random plot centers are added to the data table and should be used for analysis. The code requires the raw data (“Official_YKD.SALINITY.DATA.MASTER.2020.csv”), a definition of the nest plot study area (“NestPlotStudyAreaBoundary.geojson”),...
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Live tree species basal area from 2000 - 2009 for loblolly pine (Pinus taeda), longleaf pine (Pinus palustris), shortleaf pine (Pinus echinata), and slash pine (Pinus elliottii) clipped to the Gulf Coastal Plains and Ozarks LCC geography.Data were derived from the USFS live tree species basal area of the contiguious United States (2000-2009) Wilson, Barry T.; Lister, Andrew J.; Riemann, Rachel I.; Griffith, Douglas M. 2013. Live tree species basal area of the contiguous United States (2000-2009). Newtown Square, PA: USDA Forest Service, Northern Research Station. Abstract from html metadata for USFS live tree species basal area of the contiguious United States (2000-2009). This data product contains raster maps...
Categories: Data; Types: ArcGIS REST Map Service, ArcGIS Service Definition, Downloadable, GeoTIFF, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service, Raster; Tags: BIOSPHERE, BIOSPHERE, Basal Area, Conservation planning, Data, All tags...
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Description of condition index value scores for estuarine tidal marsh along and within 10 km of the GCPO LCC Gulf Coast subgeography. A series of raster calculations were used in a dichotomous decision-based framework to compile a per-pixel draft condition index value at a 10 m resolution for GCPO estuarine tidal marsh based on the number of configuration and condition endpoints met within each marsh pixel. Pixels not identified as a estuarine marsh but that were identified as having the potential to be marsh were given a score of 1, provided the pixels were not classified as developed. Potential estuarine tidal marsh pixels were derived from a combination of potential estuarine tidal marsh classes in the Landfire...
Categories: Data; Types: ArcGIS REST Map Service, ArcGIS Service Definition, Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: AQUATIC ECOSYSTEMS, AQUATIC ECOSYSTEMS, BIOSPHERE, BIOSPHERE, BIOSPHERE, All tags...
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This part of DS 781 presents data for the habitat map of the seafloor of the Offshore of Santa Cruz map area, California. The vector data file is included in "Habitat_OffshoreSantaCruz.zip," which is accessible from https://doi.org/10.5066/F7TM785G. These data accompany the pamphlet and map sheets of Cochrane, G.R., Dartnell, P., Johnson, S.Y., Erdey, M.D., Golden, N.E., Greene, H.G., Dieter, B.E., Hartwell, S.R., Ritchie, A.C., Finlayson, D.P., Endris, C.A., Watt, J.T., Davenport, C.W., Sliter, R.W., Maier, K.L., and Krigsman, L.M. (G.R. Cochrane and S.A. Cochran, eds.), 2016, California State Waters Map Series—Offshore of Santa Cruz, California: U.S. Geological Survey Open-File Report 2016-1024, pamphlet 40 p.,...
Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: CMHRP, Coastal and Marine Hazards and Resources Program, Continental/Island Shelf, Fisheries, Marine Nearshore Subtidal, All tags...
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This database is the result of an extensive literature search aimed at identifying documents relevant to the emerging field of dam removal science. In total the database contains 296 citations that contain empirical monitoring information associated with 207 different dam removals across the United States and abroad. Data includes publications through 2020 and supplemented with the U.S. Army Corps of Engineers National Inventory of Dams database, U.S. Geological Survey National Water Information System and aerial photos to estimate locations when coordinates were not provided. Publications were located using the Web of Science, Google Scholar, and Clearinghouse for Dam Removal Information.
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This is the collection of raw data was collected during MBM-AK TLSA annual molting goose surveys. Partial quality control has been completed for these data: following each survey, the observer listened to their survey recording that documented counts along transects and then transcribed these findings into these raw datasets (‘raw_data’). The observer listened to their recording a second time in order to confirm that their transcriptions were correct. Further quality control and tidying was completed for these raw data using R scripts noted by the file extension ‘.Rmd’ located in the ‘GitHub_Annual_Report_Code’ folder. Ultimately, these scripts produced final datasets (‘final_data’) containing data used in annual...
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ALPINE/TUNDRA, ANIMALS/VERTEBRATES, ARCTIC TUNDRA, BIOLOGICAL CLASSIFICATION, BIOLOGICAL RECORDS, All tags...
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These are the observer names, observer initials, year, and unique observer number for all observe that collected data on the YKD nest plot project from 1985 to 2019. This data is used with the nest card data to in various ways, but primarily to calculate cumulative observer experience for nest detection rates. This file is also used for quality control and reconciling non-unique observer initials across years.
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, All tags...
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From 1995 to 1999, a subset of nest plots were searched twice by field crews to estimate nest detection probability by mark-recapture methods. Over the five years, 30 plots were searched twice and over 2700 unique nests were found. From these data, nest detection probability is estimated using a Huggins-type mark recapture model where individual-level covariate effects of nest and observer attributes were estimated. These estimates are then used to predict nest detection rates in other years based on covariates of nests and observers. Nest detection rates are then applied to annual plot search to estimate nest populations for each species in the sampled area.
Categories: Data, Project; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, All tags...
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R code that takes in the nest capture history data (chdata.csv), reformats it for model fitting in Program Mark via the R package RMark. A series of models of increasing complexity are fit and compared using AIC. Output is written to text files for each model but is generally not used or saved. Code can be run to generate model results and R workspaces/ object to inspect parameter estimates. The primary purpose of this code is to explore model structures for predicting detection and as an attempt to reproduce historically used parameter estimates in past nest plot reports (e.g., Fischer et al. 2017 and earlier). Results from ‘Model 7’ are most similar to detection estimates used in the past.
Categories: Data, Software; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, All tags...
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This is the YKD egg observation data reformatted from the nest card data (‘Nest_Cards_1985_2019_QC.csv’). The file eggs.R is used to produce this data set, and then this is further summarized into yearly stats on mean initiation and hatch dates to produce the file yearstats.csv.
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, ANIMALS/VERTEBRATES, All tags...


map background search result map search result map Support to Western States Crucial Habitat Assessment Tools Live Pine Tree Species Basal Area (2000 -2009) in the GCPO LCC (Loblolly, Longleaf, Shortleaf, Slash) Habitat--Offshore Santa Cruz, California Barcode Value for GCPO LCC Estuarine Tidal Marsh Mean Forest Composition in 10 km Landscape (GCPO LCC) USGS Dam Removal Science Database v4.0 Blueprint 2020 Data Download Alaska Yukon Delta Pond Salinity Data 2006 - 2019 Teshekpuk Lake Alaska Molting Goose Survey Track Files Teshekpuk Lake Alaska Molting Goose Additional Survey Area Transects GeoPackage Teshekpuk Lake Alaska Molting Goose Raw Aerial Survey Data Alaska Yukon Delta Detection Model Fitting Code Using R and RMark Alaska Yukon Delta Double Observer Nest Plot Detection Alaska Yukon Delta Nest Plot Distance Sampling Field Protocol Alaska Yukon Delta Double Observer Nest Card Quality Control R Code Alaska Yukon Delta Nest Plot Survey Observer Names 1985 - 2019 Alaska Yukon Delta Tidy Egg Data 1985 - 2019 Alaska JBER Avian Survey Data 2007-Present Alaska Yukon Delta Salinity Quality Control R Code Alaska Yukon-Kuskokwim Delta Aerial Survey Combined Index Estimates 1985 to present Habitat--Offshore Santa Cruz, California Alaska JBER Avian Survey Data 2007-Present Alaska Yukon Delta Pond Salinity Data 2006 - 2019 Teshekpuk Lake Alaska Molting Goose Survey Track Files Teshekpuk Lake Alaska Molting Goose Additional Survey Area Transects GeoPackage Teshekpuk Lake Alaska Molting Goose Raw Aerial Survey Data Alaska Yukon Delta Detection Model Fitting Code Using R and RMark Alaska Yukon Delta Double Observer Nest Plot Detection Alaska Yukon Delta Nest Plot Distance Sampling Field Protocol Alaska Yukon Delta Double Observer Nest Card Quality Control R Code Alaska Yukon Delta Nest Plot Survey Observer Names 1985 - 2019 Alaska Yukon Delta Tidy Egg Data 1985 - 2019 Alaska Yukon Delta Salinity Quality Control R Code Alaska Yukon-Kuskokwim Delta Aerial Survey Combined Index Estimates 1985 to present Blueprint 2020 Data Download Barcode Value for GCPO LCC Estuarine Tidal Marsh Support to Western States Crucial Habitat Assessment Tools Mean Forest Composition in 10 km Landscape (GCPO LCC) Live Pine Tree Species Basal Area (2000 -2009) in the GCPO LCC (Loblolly, Longleaf, Shortleaf, Slash) USGS Dam Removal Science Database v4.0