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As part of the hydrodynamic and sediment transport investigations in San Pablo Bay and China Camp Marsh, California, particle size distributions of bed sediments were measured at most instrumented stations and are presented in a comma-delimited values spreadsheet. This portion of the data release presents San Pablo Bay and China Camp Marsh sediment particle size distributions from samples collected during multiple instrument deployments. Users are advised to check the data carefully for sampling time, location, and reference information.
Field data for fishes sampled using mid-water trawls, otter trawls, and the SmeltCam during day and night in San Pablo Bay, CA. This data release includes all measured environmental parameters and fish taxa included in the analysis.
Categories: Data,
Data Release - Revised;
Tags: Aquatic Biology,
California,
Fish Ecology,
Longfin Smelt,
San Francisco Bay-Delta,
The Hamilton Wetland Restoration Project (HWRP) is a joint venture between the US Army Corps of Engineers (USACE; San Francisco District) and the California State Coastal Conservancy. The site is located on the property of the former Hamilton Army Airfield in Novato, California, along the western edge of San Pablo Bay, which is part of northern San Francisco Bay. The initial stages of wetland restoration, which included dredged sediment reuse, took place during 2009–2011. From 2011 until April 2014, the site was maintained as partially flooded through a temporary one-way culvert that allowed bay water onto the site. On April 25th, 2014, the outboard levee towards the north-eastern corner of the site was breached...
Categories: Data,
Data Release - Revised;
Tags: Novato,
San Francisco Bay,
San Pablo Bay,
USGS Science Data Catalog (SDC),
biochemistry,
A Gust erosion chamber was used to apply horizontal shear stress to sediment cores obtained from San Pablo and Grizzly (within Suisun) Bays in California. A pair of sediment cores were collected from the same approximate locations in each bay six times between June 12th, 2019 and August 15th, 2019 for a total of 12 experiments and 24 sediment core results. Locations were chosen to capture the benthic variability along the estuarine salinity gradient, are established benthic monitoring stations, proximity to historic/restored wetlands, and practicality for field operations. Sampling dates targeted spring and neap tide conditions. An onshore experiment was conducted on each core to apply shear stresses with stepwise...
Categories: Data;
Tags: CAWSC,
California Water Science Center,
Fine Unconsolidated Substrate,
Grizzly Bay,
Gust chamber,
We performed bathymetric surveys using a shallow-water echo-sounding system (Takekawa et al., 2010, Brand et al., 2012) comprised of an acoustic profiler (Navisound 210; Reson, Inc., Slangerup, Denmark), Leica RTK GPS Viva rover, and laptop computer mounted on a shallow-draft, portable flat-bottom boat (Bass Hunter, Cabelas, Sidney, NE; Figure 7). The RTK GPS obtained high resolution elevations of the water surface (reported precision 10 cm water depth. We recorded twenty depth readings and one GPS location each second along transects spaced 100 m apart perpendicular to the nearby salt marsh. We calibrated the system before use with a bar-check plate and adjusted the sound velocity for salinity and temperature differences....
Categories: Data;
Types: Citation,
Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Bathymetry Survey,
Drought, Fire and Extreme Weather,
Extreme Weather,
San Pablo Bay,
Sea-Level Rise and Coasts,
Note: This data release has been superseded by version 3.0, available here: https://doi.org/10.5066/P9Q2YP9K. The Hamilton Wetland Restoration Project (HWRP) is a joint venture between the US Army Corps of Engineers (USACE; San Francisco District) and the California State Coastal Conservancy. The site is located on the property of the former Hamilton Army Airfield in Novato, California, along the western edge of San Pablo Bay, which is part of northern San Francisco Bay. The initial stages of wetland restoration, which included dredged sediment reuse, took place during 2009–2011. From 2011 until April 2014, the site was maintained as partially flooded through a temporary one-way culvert that allowed bay water onto...
Categories: Data,
Data Release - Revised;
Tags: Geochemistry,
Novato,
San Francisco Bay,
San Pablo Bay,
USGS Science Data Catalog (SDC),
Water samples were collected in San Pablo Bay and Grizzly Bay on five days from January through June 2020. The water samples were collected from a small vessel near pre-established USGS instrument moorings using a peristaltic pump or a Niskin bottle. Data are provided in a comma-delimited values spreadsheet.
Categories: Data;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Grizzly Bay,
PCMSC,
Pacific Coastal and Marine Science Center,
The dataset documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the San Francisco Bay of California, USA in 2021 and 2022. The dataset includes nitrate, temperature, conductivity, dissolved oxygen, and chlorophyll as well as information about phytoplankton community composition. Data-collection cruises were conducted under different environmental/flow conditions. Version history: On 3/15/24, the provisional data files hosted on this webpage were removed, and replaced with updated finalized files.
Categories: Data;
Tags: California,
San Francisco Bay,
San Pablo Bay,
Suisun Bay,
USGS Science Data Catalog (SDC),
Elemental chemistry and weight percent of the less than 0.063 mm fine sediment fraction are reported for surface sediments from shoals, the ebb tide delta, local tributaries, and inland rivers that carry sediment to San Francisco Bay, California.
Categories: Data;
Tags: Alameda Creek,
CMHRP,
Coastal and Marine Hazards and Resources Program,
Corte Madera Creek,
Fort Funston,
This 25-m-resolution surface presents bathymetric change of San Pablo Bay, California, from 1983 to 2015. This surface compares a 1-m-resolution digital elevation model (DEM) of the northern portion of San Francisco Bay (Fregoso and others, 2020), comprised of bathymetry data in the San Pablo Bay region from the time period referred to as the 2010s because the majority of the surveys were in that decade, to a 25-m-resolution bathymetric DEM of San Pablo Bay comprised of historic surveys from 1983 to 1986 (referred to as the 1980s because the majority of the surveys were in that decade). The creation of this change surface involved the resampling of the 1-m-resolution 2010s DEM to match the 25-m-resolution of the...
Surface sediment samples from the North San Francisco Bay-Delta Estuary were collected monthly at five stations located west of Rio Vista and east of Point Pinole. Sediment was collected near Montezuma Slough, Chips Island, the Concord Naval Weapons Station, Carquinez Strait near Martinez, and San Pablo Bay at water depths ranging from 6.5 to 14.3 meters. Samples were collected coincident with water-quality measurements (Cloern and Schraga, 2016) and metal concentrations in filter-feeding bivalves (Brown and Luoma, 1995; Stewart et al., 2013). Depending on the station, the period of record ranges from 13 to 24 years, from December 1993 to September 2017. Samples were sieved to <64 µm to eliminate grain-size bias...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Carquinez Strait,
Metals,
San Francisco Bay Estuary,
San Pablo Bay,
Sediment Pollution,
This datasets summarizes small mammal trapping efforts that USGS San Francisco Bay Estuary Field Station has led, co-led, or supervised, to detect and monitor the endangered salt marsh harvest mouse (Reithrodontomys raviventris) in the northern reaches of San Francisco Bay from 1998-2014. As the salt marsh harvest mouse is listed as endangered under the Endangered Species Act, sensitive location information can be made available upon request by contacting the dataset point of contact. These data support the following publication: Marcot, B.G., Woo, I., Thorne, K.M., Freeman, C.M., and Guntenspergen, G.R., 2020. Habitat of the endangered salt marsh harvest mouse (Reithrodontomys raviventris) in San Francisco Bay....
Categories: Data;
Tags: San Francisco Bay,
San Pablo Bay,
USGS Science Data Catalog (SDC),
Wildlife Biology,
biota,
The overarching goal of this research was to use site-specific data to develop local and regionally-applicable climate change models that inform management of tidal wetlands along the Pacific Northwest coast. The overarching questions were: (1) how do tidal marsh site characteristics vary across estuaries, and (2) does tidal marsh susceptibility to sea-level rise (SLR) vary along a latitudinal gradient and between estuaries? These questions are addressed in this data collection with three specific objectives: (1) measure topographical and ecological characteristics (e.g., elevation, tidal range, vegetation composition) for tidal marsh and intertidal mudflats, (2) model SLR vulnerability of these habitats, and (3)...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: 2012,
Bolinas Lagoon,
CA,
CASC,
California,
Bed sediment samples were collected in San Pablo Bay and Grizzly Bays on eight days from June through November 2019, to analyze for sediment properties including bulk density, particle size distribution, and percent organic carbon. Sediment samples were collected from a small vessel near pre-established USGS instrument moorings using a Gomex box corer that was subsampled with three push cores (37 mm in diameter) per Gomex core. Six subsamples were collected from the top 5 centimeters (cm) of each push core, a few push cores included the top 8 cm. The top two subsamples were each 0.5 cm thick, and all following subsamples were each 1 cm thick. Push core samples from the first, third, and fifth centimeter depth were...
Categories: Data;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Grizzly Bay,
PCMSC,
Pacific Coastal and Marine Science Center,
Sediment cores were collected from San Pablo Bay, in the Sacramento-San Joaquin Delta in California by the U.S. Geological Survey Pacific Coastal and Marine Science Center (PCMSC) during multiple surveys from 2011 to 2012 . The cores were analyzed for grain-size distributions at the PCMSC sediment lab.
Categories: Data;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Oceans,
PCMSC,
Pacific Coastal and Marine Science Center,
Geophysical properties (P-wave velocity, gamma ray density, and magnetic susceptibility), geochronologic (radiocarbon, excess Lead-210, and Cesium-137), and geochemical data (organic carbon content and 60 element contents) are reported for select vibracores collected aboard the S/V Retriever October 17-20, 2016 in San Pablo Bay, California. Geophysical properties were measured with a Geotek Multi-Sensor Core Logger (MSCL). Radiocarbon was measured by accelerator mass spectrometry (AMS). Excess Lead-210 and Cesium-137 activities were measured by gamma-ray counting in a high purity, low background germanium well detector (HPGe). Total organic carbon was measured in bulk sediment. Element contents were determined on...
Categories: Data;
Tags: Assessments,
CMHRP,
Coastal and Marine Hazards and Resources Program,
Geochemistry,
Geology,
This data release contains information on gravity cores that were collected by the U.S. Geological Survey in the area of San Pablo Bay and Carquinez Strait, California in 1990, 1991, and 2000. Ten (10) pdf files describe gravity cores that were split, photographed, and imaged by X-rays, and another pdf file contains a core-log legend. In addition, a shapefile provides sample collection data. Seventy-two gravity cores were collected by the U.S. Geological Survey in 1990, 1991, and 2000 from San Pablo Bay and Carquinez Strait, California. Gravity cores from San Pablo Bay contain bioturbated laminated silts and sandy clays, whole and broken bivalve shells (mostly mussels), fossil tube structures, and fine plant or...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: California,
Carquinez Strait,
Marine Geology,
Oceans > marine sediments > sedimentation,
San Francisco Bay,
This dataset consists of 14 magnetotelluric (MT) stations collected in 2015 near San Pablo Bay, California along a east-northeast profile. The U.S. Geological Survey acquired these data to understand the fault geometry of the Hayward Fault and the Rodgers Creek Fault.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Apparent Resistivity,
California,
Contra Costa County,
Earth Magnetic Field,
GMEGSC,
Polygon shapefile showing the footprint boundaries, source agency origins, and resolutions of compiled bathymetric digital elevation models (DEMs) used to construct a continuous, high-resolution DEM of the northern portion of San Francisco Bay.
Bed sediment samples were collected in San Pablo Bay and Grizzly Bays on eight days from January through September 2020, to analyze for sediment properties including bulk density, particle size distribution, and percent organic carbon. Sediment samples were collected from a small vessel near pre-established USGS instrument moorings using a Gomex box corer that was subsampled with three push cores (37 mm in diameter) per Gomex core. Six subsamples were collected from the top 5 centimeters (cm) of each push core, a few push cores included the top 8 cm. The top two subsamples were each 0.5 cm thick, and all following subsamples were each 1 cm thick. Push core samples from the first, third, and fifth centimeter depth...
Categories: Data;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Grizzly Bay,
PCMSC,
Pacific Coastal and Marine Science Center,
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