Filters: Tags: Wildlife Biology (X) > Types: OGC WMS Layer (X)
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A total of 27 temperature sensors were deployed along the lower 90 miles of the Yakima River at 7 locations where cold water had been previously observed. These 7 cold-water areas had 3 to 6 temperature sensors installed to document the extent and duration of these cold-water areas and their impacts on mainstem temperatures of the Lower Yakima River. Cold-water areas included the mouths of tributaries, alongside channels, and within alcoves. Sensor deployments ranged from 1 to 2 years beginning in October 2018. All temperature data are included in the Yakima.temperatures.zip folder. Details of each monitoring location are provided in the site.locs.csv file. In addition to the raw data and site location information,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Benton County,
Ecology,
Hydrology,
Richland, WA,
These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Shapefile;
Tags: California,
Ecology,
Marin County,
Point Reyes National Seashore,
USGS Science Data Catalog (SDC),
To support an investigation of the effectiveness of a large-scale river restoration project, several types of field data were collected from two gravel-bed reaches of the regulated lower Merced River in California's Central Valley, primarily in the fall of 2016. These data sets were intended to characterize salmon spawning habitat and identify factors influencing spawning site selection. This parent data release includes links to child pages for the following data sets: 1) Bulk samples of streambed sediment used to characterize the subsurface grain size distribution. 2) Pebble counts used to characterize the sediment grain size distribution of the bed surface. 3) Force gage measurements used to parameterize a...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: California,
Central Valley,
Ecology,
Geomorphology,
Gravel friction angle,
These bat location estimates have been reported by Bogan and others (In press) and come in the form of a GIS shape file. Three species of nectar-feeding phyllostomid bats migrate north from Mexico into deserts of the United States (U.S.) each spring and summer to feed on blooms of columnar cacti and century plants (Agave spp). However, the habitat needs of these important desert pollinators are poorly understood. We followed the nighttime movements of two species of long-nosed bats (Leptonycteris yerbabuenae and L. nivalis) in an area of late-summer sympatry at the northern edges of their migratory ranges. We radiotracked bats in extreme southwestern New Mexico during 22 nights over two summers and acquired location...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Animas Mountains,
Big Hatchet Mountains,
Chihuahuan Desert,
Chiroptera,
Desert Southwest,
Observations (reduced to detected/not detected) of 45 vertebrate species (seven mammals, seven amphibians, and 31 reptiles) across Southern California pitfall sampling projects conducted between 1995 through 2015. Habitat patch locations of every pitfall sampling project presented in a shapefile. Habitat patches were measured based on the size when pitfall sampling began within each. Sampling projects within the same geographic area may have different sized patches based on date of project sampling and if patch erosion occurred. A matrix of whether each species was expected within each habitat patch's species pool based on range maps and published records is also included. These data support the following publication:...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Los Angeles County,
Orange County,
Riverside County,
San Bernardino County,
San Diego County,
Burmese pythons are an invasive species in the Greater Everglades Ecosystem. Burmese pythons captured in the ecosystem are euthanized, and in an effort to learn about this invasive species, all euthanized pythons are necropsied, during which time samples are collected. We analyzed the stable isotope ratios of carbon and nitrogen in muscle samples from 423 Burmese pythons euthanized and necropsied between 2003-05-01 and 2012-09-02, and after processing and QA/QC, we were left with isotope ratios for 410 samples, which we reported here. We used these data to estimate the size of the isotopic niche of the Burmese python, commonly measured using standard ellipse areas, or SEAs. To put these SEAs in context, we conducted...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Ecology,
Everglades,
Florida,
Florida Bay-Florida Keys,
Southern Florida,
The Barrier Island Comprehensive Monitoring (BICM) program was developed by Louisiana’s Coastal Protection and Restoration Authority (CPRA) and is implemented as a component of the System Wide Assessment and Monitoring (SWAMP) program. The program uses both historical data and contemporary data collections to assess and monitor changes in the aerial and subaqueous extent of islands, habitat types, sediment texture and geotechnical properties, environmental processes, and vegetation composition. Examples of BICM datasets include still and video aerial photography for documenting shoreline changes, shoreline positions, habitat mapping, land change analyses, light detection and ranging (lidar) surveys for topographic...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Ecology,
Gulf of Mexico,
Louisiana,
Louisiana Coastal,
Modern Delta Region,
Data presented are results of surveys in 2022 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at the 2016-19 nest monitoring locations (Cleveland National Forest, Rey River Ranch, and Vista Irrigation District) and at Lake Henshaw along the Upper San Luis Rey River. Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded or not, and if so, color combination), and breeding status (paired, undetermined, or transient)...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Ecology,
San Diego,
San Luis Rey River,
USGS Science Data Catalog (SDC),
Wildlife Biology,
This dataset consists of data collected at Badlands National Park (Interior, SD) that were used in the analysis in support of the article titled "Conserving all the pollinators: Variation in probability of pollen transport among insect taxa," which has been submitted to "Natural Areas Journal." Data collected between May-October, 2010 and 2011, and June-July 2012 included insects found in contact with floral reproductive parts of focal plant species, or plant species within a 1 ha plot surrounding focal plant, and pollen species removed from the collected insects' bodies. Focal plant species included Astragalus barrii (May-June 2010-11), Eriogonum visheri (July-August, 2010-11), Chrysothamnus parryi (September-October...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Badlands National Park,
Ecology,
Great Plains,
Hymenoptera,
Jackson County,
This database is the result of an extensive literature search aimed at identifying documents relevant to the emerging field of dam removal science. In total the database contains 296 citations that contain empirical monitoring information associated with 207 different dam removals across the United States and abroad. Data includes publications through 2020 and supplemented with the U.S. Army Corps of Engineers National Inventory of Dams database, U.S. Geological Survey National Water Information System and aerial photos to estimate locations when coordinates were not provided. Publications were located using the Web of Science, Google Scholar, and Clearinghouse for Dam Removal Information.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Australia,
Austria,
Canada,
Connectivity,
Dam Removal,
Several Francisella spp. including F. noatunensis are regarded as important emerging pathogens of wild and farmed fish. However, very few studies have investigated the virulence factors that allow these bacterial species to be pathogenic in fish. The Francisella Pathogenicity Island (FPI) is a well-described, gene-dense region encoding major virulence factors for the genus Francisella. PdpA is a member of the pathogenicity determining protein genes encoded by the FPI that are implicated in the ability of the mammalian pathogen, F. tularensis, to escape and replicate in infected host cells. Using a sacB suicide approach, we generated pdpA knockouts to address the role of PdpA as a virulence factor for F. noatunensis....
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
USGS Science Data Catalog (SDC),
Water Quality,
Water Resources,
Wildlife Biology,
This dataset consists of raster geotiff outputs of relative environmental favorability for coral growth and survival in the United States territories of Guam and American Samoa across 3 climate scenarios: Present, Intermediate Emissions (Representative Concentration Pathway 4.5), and Worst Case Emissions (Representative Concentration Pathway 4.5). These datasets were generated from a synthesis of spatial variability in many environmental conditions, including thermal stress, wave power, irradiance, chlorophyll concentrations, macroalgal cover, calcite concentrations, turbidity, and erosion. Input conditions were classified as “Managed” or “Non-managed” based on whether the condition could be managed at the island...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: American Samoa,
American Samoa,
Ecology,
Guam,
Guam,
The U.S. Geological Survey provides a wide range of scientific information to an even wider group of stakeholders. Understanding what capacities are needed and if and or where these capacities exist across the USGS landscape is critical in moving science to the next level of use, implementation, and visualization. The concept behind the groups organized to conduct and interpret the survey that collected these data took advantage of the USGS’s position as a science organization with expertise spanning a wide range of science disciplines, stakeholders, and responsibilities. A survey was conducted of USGS employees (Sep 20-Nov 20) to get a current sample of the capacities that exist across the USGS.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Botany,
Climatology,
Ecology,
Economic Geology,
We developed a LiDAR-based habitat model for the threatened Marbled Murrelet (MAMU) in the Siuslaw National Forest, Oregon, using a two-step approach. First, we tested the applicability of the LiDAR-based model developed for the Coos Bay District of the Bureau of Land Management (BLM) to the Siuslaw N.F. In the second step, we tested alternative habitat models developed with forest structural data and Murrelet survey data from the Siuslaw N.F. We compared the performance of each model to provide forest managers with the best predictive tool to guide habitat management for the Marbled Murrelet. This shapefile contains the probability of Marbled Murrelet occupancy values of each model for vegetation polygons defined...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Ecology,
Forestry,
Land Use Change,
Oregon,
Oregon Coast Range,
Note: this dataset has been superseded by this new data product: Simpson, A., Turner, R., Blake, R., Liebhold, A., and Dorado, M., 2021, United States Register of Introduced and Invasive Species: U.S. Geological Survey data release, https://doi.org/10.5066/P95XL09Q. Invasive species are a subset of non-native (or nonindigenous) species, and knowing what species are non-native to a region is a first step to managing invasive species. This is the second update to the dataset "First comprehensive list of non-native species established in three major regions of the United States" supporting a USGS Open File Report by the same name published on 2018-10-17. Version 3.0 of the non-native species list, as of 2020-09-15,...
Categories: Data,
Data Release - Revised;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Alaska,
Aquatic Biology,
Botany,
Conterminous United States,
Ecology,
Two tributary watersheds¬ Cottonwood Creek and Little Dry Creek¬ to the greater San Joaquin watershed, in California’s Central Valley were assessed for sediment and flow dynamics, between water years (Oct. 1 to Sept. 30) 2011 and 2019. The two systems deliver suspended sediment to the San Joaquin River below Friant Dam, California. Because these two creeks are directly down river of Friant Dam, they become the most upstream source of sediment to the San Joaquin River below Friant Dam. Thus, is it important to assess their contribution to the San Joaquin system. Flow from each creek watershed, along with the San Joaquin River, was compared to continuously measured water surface elevations to quantify flow direction...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Cottonwood Creek,
Cottonwood Creek,
Ecology,
Geomorphology,
Hydrology,
In Hawai‘i and other oceanic islands with few native land mammals, black rats (Rattus rattus) are among the most damaging invasive vertebrate species to native forest bird populations and habitats, due to their arboreal behavior and generalist foraging habitats and habitat use. We evaluated the nesting response of Hawai‘i ‘Elepaio (Chasiempis sandwichensis; Monarchidae), a generalist insectivore, to the removal of black rats using rodenticide in a before-after-control-impact study in high and low, mesic montane habitat recovering from long-term damage from introduced ungulates and weeds. We monitored nesting and rat activity during 2015–2016 before applying diphacinone bait in 2017 to remove rats from two 700 x...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: BACI,
Ecology,
Hawaii,
Hawaii County 2,
Hawaii Volcanoes National Park,
The spatial data results of USGS surveys for Least Bell's Vireo (Vireo bellii pusillus, LBVI) along the Tijuana River and San Diego River in 2020 to determine abundance and distribution of vireos to facilitate population trend analyses and collect information on dispersal and site fidelity of banded vireos as part of long-term demographic studies at multiple sites.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: San Diego County,
San Diego River,
Tijuana River,
USGS Science Data Catalog (SDC),
Wildlife Biology,
The avian community of peatland habitats were surveyed along belt transects established in multiple units of Seney National Wildlife Refuge, representing peatland habitats dominated by a range of sedge to shrub cover at varying levels. Surveys were conducted during the 3-week period of mid-May to early June and again during mid-June-early July in three years (2007–2009). Three datasets are included here 1) data of presence/absence of breeding bird species detected in each 100-m segment of belt transects, 2) four-letter codes for bird species, and 3) environmental and land-cover attributes summarized for 200-m buffers around the bird-survey segments (100m x 100m), and number of years since each segment was burned,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Ecology,
Michigan,
Schoolcraft County,
Seney National Wildlife Refuge,
USGS Science Data Catalog (SDC),
We surveyed for Least Bell’s Vireos (Vireo bellii pusillus; vireo) and Southwestern Willow Flycatchers (Empidonax traillii extimus; flycatcher) along the San Luis Rey River, between College Boulevard in Oceanside and Interstate 15 in Fallbrook, California (middle San Luis Rey River), in 2021. Surveys were conducted from April 13 to July 14 (vireo) and from May 18 to July 13 (flycatcher). We found 180 vireo territories, at least 125 of which were occupied by pairs. The vireo population size decreased by 6 percent from 2020 to 2021. One resident flycatcher, of undetermined breeding status, was observed in the survey area in 2021. He was detected from May 20 to June 4, 2021, and no evidence of pairing or nesting was...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: San Diego,
Southern California,
USGS Science Data Catalog (SDC),
Wildlife Biology,
endangered species,
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