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The purpose of this project is to determine if a newly formed rapid on the Colorado River is acting as a barrier to invasive non-native fish moving upstream from Lake Mead into the Grand Canyon National Park (GCNP). These non-native fish would threaten native desert fishes upstream to include the endangered Razorback Sucker and the Humpback Chub. The project will fill knowledge gaps on fish movement, species composition, and population dynamics in this minimally studied section of the Colorado River, and inform managers on whether active management actions (e.g. native fish translocations; non-native removals) may be required to conserve native fishes in the western Grand Canyon.
R code that takes in the nest capture history data (chdata.csv), reformats it for model fitting in Program Mark via the R package RMark. A series of models of increasing complexity are fit and compared using AIC. Output is written to text files for each model but is generally not used or saved. Code can be run to generate model results and R workspaces/ object to inspect parameter estimates. The primary purpose of this code is to explore model structures for predicting detection and as an attempt to reproduce historically used parameter estimates in past nest plot reports (e.g., Fischer et al. 2017 and earlier). Results from ‘Model 7’ are most similar to detection estimates used in the past.
Categories: Data,
Software;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
BIOLOGICAL CLASSIFICATION,
BIOLOGICAL CLASSIFICATION,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project Florida Keys 2000,
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS).CREMP assessments have been conducted annually at fixed sites since 1996 and data collectedprovides information on the temporal changes in benthic cover and diversity of stony corals andassociated marine flora and fauna. The core field methods continue to be underwatervideography and timed coral species inventories. Findings presented in this report include datafrom 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between 2007...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS).CREMP assessments have been conducted annually at fixed sites since 1996 and data collectedprovides information on the temporal changes in benthic cover and diversity of stony corals andassociated marine flora and fauna. The core field methods continue to be underwatervideography and timed coral species inventories. Findings presented in this report include datafrom 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between 2007...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
This project will be focused on hosting 2-3 workshops in 2013 to train people to conduct the Springs Stewardship Institute’s spring assessment protocol and promote it as a standardized method. This will facilitate standardized data collection across the landscape that can contribute to a broad-scale inventory and assessment of springs, seeps, and aquatic resources throughout the Desert LCC.
Categories: Data,
Project;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Shapefile;
Tags: 2012,
AZ-01,
AZ-02,
AZ-03,
AZ-04,
This project is intended to provide conservation science support across Arizona through development of conservation case studies and synthesis products and support for data entry for listed species in Arizona (the yellow-billed cuckoo). One full-time Research Specialist and one ¼-time student research assistant will synthesize best practices best practices for managing invasive aquatic species and invasive plants in grasslands. The recipient will work collaboratively with Arizona Game and Fish Department and FWS to identify shared species of concern and develop useful synthesis products (case studies and publications). One student Research Assistant will be tasked with increasing communication across FWS programs...
R code that takes in the nest capture history data (chdata.csv), reformats it for model fitting in the Bayesian MCMC software JAGS via the R package jagsUI. Various generalized linear mixed models are fit using a Huggins two occasion capture history model structure as in Program Mark. A series of models of increasing complexity are fit and compared using DIC. Model text is written to text files for each model but is generally not used or saved. Posteriors are saved as Rworkspaces or written to text files for use in population estimation (nostpop.R). Code can be run to generate model results and R workspaces/objects to inspect parameter estimates. The primary purpose of this code is to compare various mixed model...
Categories: Data,
Software;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
ANIMALS/VERTEBRATES,
BIOLOGICAL CLASSIFICATION,
BIOLOGICAL CLASSIFICATION,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project Florida Keys 2015,
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project (CREMP),
about,
absence,
accepted,
acceptedNameAuthorship,
The purpose of the Coral Reef Evaluation and Monitoring Project (CREMP) is to monitor the status and trends of selected reefs in the Florida Keys National Marine Sanctuary(FKNMS). CREMP assessments have been conducted annually at fixed sites since 1996 and data collected provides information on the temporal changes in benthic cover and diversity of stony corals and associated marine flora and fauna. The core field methods continue to be underwater videography and timed coral species inventories. Findings presented in this report include data from 109 stations at 37 sites sampled from 1996 through 2008 in the Florida Keys and 1999 through 2008 in the Dry Tortugas. The report describes the annual differences (between...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: Coral Reef Evaluation and Monitoring Project Florida Keys 2016,
about,
absence,
accepted,
acceptedNameAuthorship,
This project will supply data to support various components of the Southeast Conservation Adaptation Strategy’s (SECAS) Southeast Conservation Blueprint (Blueprint). SARP routinely compiles data, analyzes, and priorities aquatic barriers and all areas covered by the Blueprint except for West Virginia and the US Virgin Islands. These data and subsequent analyses are utilized by SECAS to derive a network complexity indicator. This project will enable SARP to provide a more complete assessment for West Virginia to make it more comparable to the rest of the Southeast. Additionally, SARP will provide barrier information for the US Virgin Islands so that SECAS can expand the network complexity analysis to the Caribbean...
Categories: Data,
Project;
Tags: EARTH SCIENCE > LAND SURFACE > LANDSCAPE,
Project,
Science Applications,
accepted,
biota,
The goals of this study are to: (1) generate a genetic toolset (80-90 microsatellite loci per species) for long term genetic monitoring of both wild and captive populations of each threatened gartersnake species (THEQ & THRU) that inhabit Arizona and New Mexico; (2) conduct field surveys at Saliz Creek to assess the genetic, demographic, and life history effects of a 2012 wild translocation event for THRU to better assess the strategies of genetic management and success of translocations; (3) conduct targeted surveys for both species at key sites to collect additional samples from geographic gaps and increase sample sizes at previously sampled sites to further evaluate connectivity and genetic diversity of these...
mdEditorWeb application for writing metadata. Built using ember.js.See CONTRIBUTING.md for info on making contributions.Also, see the wiki for more info about the project.Prerequisites (for development)You will need the following things properly installed on your computer. Git Node.js (with NPM) Bower Ember CLI PhantomJSInstallation git clone https://github.com/adiwg/mdEditor.git this repository cd mdEditor change into the new directory npm install bower installRunning / Development ember server Visit your app at http://localhost:4200.Code GeneratorsMake use of the many generators for code, try ember help generate for more detailsRunning Tests ember test ember test --serverBuilding ember build (development) ember...
Categories: Data,
Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: LCC,
Project,
accepted
mdEditorWeb application for writing metadata. Built using ember.js.See CONTRIBUTING.md for info on making contributions.Also, see the wiki for more info about the project.Prerequisites (for development)You will need the following things properly installed on your computer. Git Node.js (with NPM) Bower Ember CLI PhantomJSInstallation git clone https://github.com/adiwg/mdEditor.git this repository cd mdEditor change into the new directory npm install bower installRunning / Development ember server Visit your app at http://localhost:4200.Code GeneratorsMake use of the many generators for code, try ember help generate for more detailsRunning Tests ember test ember test --serverBuilding ember build (development) ember...
Categories: Data,
Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: LCC,
Project,
accepted
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