Skip to main content
Advanced Search

Filters: Tags: amphibians (X) > partyWithName: U.S. Geological Survey (X)

35 results (20ms)   

View Results as: JSON ATOM CSV
thumbnail
The data contained in child items of this page were developed to support the Species Status Assessments conducted by the U.S. Fish & Wildlife Service and conservation planning for State, Federal, and non-government researchers, managers, landowners, and other partners for five focal herpetofauna species: gopher tortoise (Gopherus polyphemus), southern hognose snake (Heterodon simus), Florida pine snake (Pituophis melanoleucus mugitus), gopher frog (Lithobates capito), and striped newt (Notophthalmus perstriatus). These data were developed by the USGS Cooperative Fish & Wildlife Research Unit at the University of Georgia in collaboration with other partners. The three child items contain the following data: (1)...
thumbnail
This database contains literature citations and associated summaries pertaining to livestock grazing effects on amphibians and their habitats, with an emphasis on the Oregon spotted frog (Rana pretiosa) and other listed/sensitive wetland-breeding amphibians in the western United States. This is not meant to be an exhaustive list, nor did we perform a systematic meta-analysis; rather, literature records were included based on topical relevance. *HINT: If you are looking for the database SEARCH TOOL, scroll down to 'Attached Files' and download 'Annotated_bibliography_with_search_tool.accdb.' Open the database file to enter the search form.* This data release supersedes Rowe, J.C., Pearl, C.A., Adams, M.J., and McCreary,...
thumbnail
The data presented include concentrations of 10 metals in sediments and composite larval amphibian tissues from 20 wetlands across the United States. Sixteen of the wetlands were sampled in 2019 and four were sampled in 2015-2016. Where possible both larval anurans (frogs and toads) and salamanders were collected from each wetland. The data also include information on metal concentrations in amphibian tissues after the gut contents were removed to understand metal bioaccumulation potential and the molar ratio of selenium to mercury in each tissue composite sample. This data release supports the following publication: Smalling, K.L., Oja, E.B., Cleveland, D.M., Davenport, J.M., Eagles-Smith, C., Grant, E.H.C., Kleeman,...
thumbnail
The data support a study that describes the development and validation of a primer and probe based quantitative PCR (qPCR) assay for use with environmental DNA to detect Northwest salamander (Ambystoma gracile), a species endemic to the temperate Pacific coastal region of North America. The metadata includes qPCR quantification cycle (Cq) values from testing the A. gracile assay on DNA extracted from tissue samples derived from several A. gracile and closely related species and Cq values from testing the assay on environmental DNA (eDNA ) samples collected from two lakes, one containing A. gracile and one without the species.
thumbnail
This data set is comprised of 3 files of information collected on amphibians and vernal pool habitats at Canaan Valley National Wildlife Refuge from 2004 - 2016.
thumbnail
We used 29 years of data on boreal chorus frogs at two sites to view life-history, estimate demographic parameters, assess weather-related covariates, and determine the magnitude of process variation in target parameters. Average estimates of survival probabilities were 0.51 (Standard error [SE]=0.04) and 0.43 (SE=0.04), and average estimates of recruitment probabilities were 0.64 (SE=0.07) and 0.44 (SE=0.04). Process variation accounted for greater than 76% of the total temporal variation in both parameters at one pond and in survival probability alone at the other.
thumbnail
The data include concentrations of current use pesticides in tissues of larval wood frog (Lithobates sylvaticus) and spotted salamander (Ambystoma maculatum) and the presence of ranavirus in wood frogs and spotted salamanders from three northeastern National Wildlife Refuges sampled in 2013 and 2014. The data also include estrogenicity, protein phosphatase 2A inhibition and a suite of 15 major and minor elements in sediment screened using portable X-Ray Fluorescence. The data include sediment and tissue samples collected from 16 wetlands at the Patuxent Research Refuge (PRR) in central Maryland, USA, 15 wetlands at the Assabet River and Oxbow National Wildlife Refuges (EMASS) in eastern Massachusetts, USA, and nine...
These data represent capture mark recapture data along with associated disease status for boreal toads (Anaxyrus boreas) from Wyoming and Montana from 2004-2016 and four frog species (Rana draytonii, R. muscosa, R. pretiosa, R. sierrae) from 2001-2016.
thumbnail
These data are the results of surveys for the Shasta salamander complex (Hydromantes shastae, H. samweli, and H. wintu) conducted at 87 survey plots on the Shasta-Trinity National Forest from April 2019 to March 2020. Time- and area-constrained occupancy surveys were conducted at plots selected within high-priority areas identified by the U.S. Fish and Wildlife Service. There are additional surveys planned for future field seasons. As the Shasta Salamander is under review for listing under the Endangered Species Act, sensitive location information is restricted, and can be made available upon request by contacting the dataset point of contact.
thumbnail
This data set contains mark-recapture information for individuals of Dicamptodon tenebrosus and Ascaphus truei marked for individual recognition. Amphibians represented in this data set were captured in 14 first-order perennial and seasonally intermittent streams in the East Fork of the South Fork of the Trask River in the northern Oregon Coast Range. Individuals are larval and mature aquatic Dicamptodon tenebrosus and larval Ascaphus truei. Of the Ascaphus truei larvae only individuals thought to be in their first summer when first captured are included (these are individuals whose knees had yet to emerge from under the anal flap or fold).
thumbnail
The data presented includes chloride concentration and specific conductance in surface water collected from 33 wetlands in the Williston Basin of Montana and North Dakota, 2015-2017 as well as count data for three species of amphibians captured at each wetland. Data also includes concentrations of metals in bed sediment and larval amphibians collected from 32 and 12 wetlands, respectively in 2015-2016. Abundance of barred tiger salamanders (Ambystoma mavortium), boreal chorus frogs (Pseudacris maculata), northern leopard frogs (Lithobates pipiens) was estimated at 33 wetlands from 2015-2017. Surface water was collected in the summer from each wetland in 2015-2017 at the same time as the amphibian surveys and analyzed...
thumbnail
Biological endpoints for three focal test species [Daphnia magna (mortality), Psuedacris maculata (mortality, growth, and development), and Lemna gibba (growth)] in response to exposure to reconstituted or field-collected water under laboratory conditions. Field-collected waters were collected from wetlands within the Prairie Pothole Region (PPR) of the United States. Reconstituted water was mixed to mimic some chemistry of surface water from brine contaminated PPR wetlands. Also included are water quality and chemical concentration data from all assays.
thumbnail
The raster data in the geodatabase represent range-wide habitat suitability model predictions for five species of herpetofauna: gopher tortoise (Gopherus polyphemus), southern hognose snake (Heterodon simus), Florida pine snake (Pituophis melanoleucus mugitus), gopher frog (Lithobates capito), and striped newt (Notophthalmus perstriatus). Collectively, the habitat suitability rasters extend across the range of these species in the Southeast US, including areas in Louisiana, Mississippi, Alabama, Florida, Georgia, South Carolina, and North Carolina. This assessment was conducted by the USGS Cooperative Fish & Wildlife Research Unit at the University of Georgia in collaboration with other partners. Habitat suitability...
thumbnail
Data are the result of fixed-area, time-constrained searches for terrestrial salamanders within and nearby a wildfire-affected area of the Willamette National Forest, OR. The spatial extent of the study was within one kilometer of the border of the Clark fire that burned an area of 2,009 ha in 2003. Site surveys occurred during March and April, 2005. An important feature of the data is that 100m2 sub-plots (nested within plots) were repeatedly searched for terrestrial salamanders independently up to nine times so that variation in the probability of capture could be estimated and accounted for concurrent with estimates of occupancy probability.
thumbnail
There are two datasets included in this entry. The diurnal dataset contains 28 columns of data collected during transects surveys. The nocturnal dataset contains 52 columns. We randomly select 56 sites, each 50 m in length, from 37,968 m of transects spanning the island that were originally created for bird surveys in 1982 through the cooperative efforts of the U.S. Fish and Wildlife Service, the Department of Natural Resources of CNMI, and the U.S. Forest Service. For diurnal surveys, 56 transects were surveyed twice per day for 1–3 consecutive days resulting in six survey occasions. For nocturnal surveys, we surveyed 51 of the 56 transects 4 times per night for 1–3 consecutive nights resulting in 12 survey occasions....
thumbnail
Water, sediment, anuran food (leaf litter and detritus) and whole body larval amphibian composites were analyzed for over 100 current-use pesticides from 24 wetlands representing land-use gradients in the New Jersey Pinelands, USA during 2014-2016. Emerging amphibian pathogens, Ranavirus and Batrachochytrium dendrobatidis (Bd) were also assessed in individual larvae at the 24 wetlands. Tables in this data release contain the results from these analyses, with quality assurance summaries, along with site information, including land-use classifications.
thumbnail
Data in this dataset were collected as a part of the Student Network for Amphibian Pathogen Surveilance (SNAPs) program throughout the United States by undergraduate students in biology or ecology courses as a part of their curriculum. This data was collected in the field by students and sent to the USGS National Wildlife Health Center (NWHC) for testing of two amphibian fungal pathogens, Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bs). The dataset includes both the field records of the individual amphibians tested and the results for individuals for Bd and Bs. This is Product Number 209311 of the U.S. Geological Survey Amphibian Research and Monitoring Initiative (ARMI).
thumbnail
We evaluated the thermal regime and relative abundance of native and non-native fish and invertebrates within Kelly Warm Spring and Savage Ditch, Grand Teton National Park, Wyoming. Water temperatures within the system remained relatively warm year round with mean temperatures less than 20 degrees Celsius near the source, and greater than 5 degress Celsius approximately 2 km downstream of the spring source. A total of 5 non-native species were collected; Convict/Zebra Cichlids (Cichlasoma nigrofasciatum), Green Swordtail (Xiphophorus hellerii), Tadpole Madtom (Noturus gyrinus), Guppies (Poecilia reticulate), and Goldfish (Carassius auratus). Non-native fish (Zebra Cichlids and Swordtails), red-rimmed melania snails...
thumbnail
The Shasta salamander (Hydromantes shastae) has been petitioned for listing under the Endangered Species Act. The greatest threat to the species is likely habitat loss that will be caused by the increase in elevation of Shasta Lake that will occur with proposed increases in the height of Shasta Dam to increase water storage capacity and maintain cold water for Chinook salmon (Oncorhynchus tshawytscha). Another potential threat is the fungus Batrachochytrium salamandrivorans, which has not yet been detected in North America but is lethal to related salamanders (Hydromantes strinatii) in Europe (Martel et al. 2014). In addition to these threats, recent genetic evidence suggests that the species as originally petitioned...
We investigated population dynamics in boreal toads relative to abiotic (fall temperatures and snowpack -the covariates provided here) and biotic (the abundance of another anuran host,data provide here) characteristics of the local environment at 6 sites in Wyoming, USA. We used capture-recapture data (i.e., 1 or 0, provided here) and a robust design multi-state model framework that incorporates disease state uncertainty to assess our a priori hypotheses about interactions among covariates (temperature, snowpack and presence of spotted frogs) and boreal toad survival. Files include: br_bd.csv, disease data; br_cmr.csv, capture-mark recapture data (1,0); br_cov.csv, soil and snow information detailed in this file;...
map background search result map search result map Terrestrial salamander captures after the 2003 Clark Fire, Willamette National Forest, OR The thermal regime and species composition of fish and invertebrates in Kelly Warm Spring, Grand Teton National Park, WY-Data Trask Watershed Study Amphibian Survival and Movement Data, 2008-2015 Current-use pesticides and emerging amphibian pathogens in natural ponds, excavated ponds, and stormwater basins from 24 sites varying in land-use classifications throughout the New Jersey Pinelands, 2014-2016 Chloride in water, metals in sediment and amphibian tissues and amphibian capture information from wetlands in the Williston Basin of Montana and North Dakota, 2015-2017 Range-wide habitat suitability maps for at-risk species in the longleaf system Range-wide habitat suitability maps for at-risk species in the longleaf system - raster version Shasta Salamanders Surveys for the Shasta-Trinity National Forest (ver. 2.0, July 2020) Shasta Salamanders Survey Results for the Shasta-Trinity National Forest, 2019-2020 Demographic data from two chorus frog populations in Colorado Detection and non-detection records of Saipan's terrestrial herpetofauna, 2018 Capture-recapture, disease and covariate data for boreal toads from Blackrock Wyoming 2019 Metal concentrations in sediment and amphibian tissues from wetlands sampled across the United States Current use pesticides in larval amphibian tissues, amphibian pathogen and wetland sediment screening data from three northeastern National Wildlife Refuges, 2013-14 Long-term effects of timber harvest on vernal pool availability and occupancy of two obligate amphibians Biological and chemical data from chloride bioassays with native wetland species in natural and reconstituted Prairie Pothole waters Student Network for Amphibian Pathogen Surveillance Data (ver. 2.0, April 2024) Data relating to the development of a quantitative PCR assay for detecting Northwest salamander (Ambystoma gracile) in environmental DNA samples Terrestrial salamander captures after the 2003 Clark Fire, Willamette National Forest, OR Trask Watershed Study Amphibian Survival and Movement Data, 2008-2015 Long-term effects of timber harvest on vernal pool availability and occupancy of two obligate amphibians Detection and non-detection records of Saipan's terrestrial herpetofauna, 2018 Shasta Salamanders Survey Results for the Shasta-Trinity National Forest, 2019-2020 The thermal regime and species composition of fish and invertebrates in Kelly Warm Spring, Grand Teton National Park, WY-Data Demographic data from two chorus frog populations in Colorado Current-use pesticides and emerging amphibian pathogens in natural ponds, excavated ponds, and stormwater basins from 24 sites varying in land-use classifications throughout the New Jersey Pinelands, 2014-2016 Chloride in water, metals in sediment and amphibian tissues and amphibian capture information from wetlands in the Williston Basin of Montana and North Dakota, 2015-2017 Shasta Salamanders Surveys for the Shasta-Trinity National Forest (ver. 2.0, July 2020) Biological and chemical data from chloride bioassays with native wetland species in natural and reconstituted Prairie Pothole waters Capture-recapture, disease and covariate data for boreal toads from Blackrock Wyoming 2019 Current use pesticides in larval amphibian tissues, amphibian pathogen and wetland sediment screening data from three northeastern National Wildlife Refuges, 2013-14 Range-wide habitat suitability maps for at-risk species in the longleaf system Range-wide habitat suitability maps for at-risk species in the longleaf system - raster version Data relating to the development of a quantitative PCR assay for detecting Northwest salamander (Ambystoma gracile) in environmental DNA samples Metal concentrations in sediment and amphibian tissues from wetlands sampled across the United States Student Network for Amphibian Pathogen Surveillance Data (ver. 2.0, April 2024)