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This dataset provides supporting information for the species distribution data used in the associated manuscript. Collections of five non-native fish species were made by a number of institutions, and several capture techniques were used. This dataset also includes number of individuals of each species captured at each locality.
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Data are time series of substrate grain size, remotely sensed water column turbidity, and measures of abundance (e.g., density, percent cover) of the nearshore subtidal (3-17 m depth) benthic community (vegetation, invertebrates, and fish) collected before (2008-2011) and during dam removal (2012-2014).
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This collection of GIS layers was prepared for the report Alaska Arctic Marine Fish Ecology Catalog (U.S. Geological Survey Scientific Investigations Report 2016–5038). The layers display geographic distribution and sampling locations for Arctic marine fish species in the region of United States sectors of the Chukchi and Beaufort Seas. Certain diadromous species (for example, Pacific salmon, char, and whitefishes) are treated as marine fishes (McDowall, 1987) because much of their life cycle is in marine and brackish environments. This synthesis of information is meant to provide current information and understanding of this fauna and its relative vulnerability to changing Arctic conditions. There are 104 species...
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This data release contains environmental and quality control results for chemical, biological, and physical sampling of water and bed sediment from Albemarle Sound and associated tributaries between 2012 and 2014 referenced in USGS OFR 2016-1171. Appendix 1 contains all quality control results to characterize the bias and variability of sampling, handling, and analysis of water, phytoplankton, and bed sediment samples. Appendix 2 contains all the chemical, biological, and physical results for water samples collected in July and August of 2012. Appendix 3 contains all the chemical, biological, and physical results for water samples collected from March 2013 to February 2014. Data are included for discrete samples...
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The Fisheries and Wildlife Resources Group combines the expertise of professional fisheries scientists, wildlife biologists, environmental regulatory specialists, and environmental chemists, to conduct a wide variety of multidisciplinary environmental field and laboratory studies concerning aquatic and terrestrial habitats, wildlife, water quality, and environmental impacts.
Hydroacoustic estimates of fish density are used for fisheries management in central Lake Erie. Hydroacoustic data were collected along up to four cross-lake transects in central Lake Erie July 2010 through July 2019. Software-generated raw variables used for calculating estimates of hydroacoustic fish densities are presented here.
Water, bed sediment, and biota were sampled in selected streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey (USGS), in cooperation with the U.S. Environmental Protection Agency.
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These data describe the catch and biological data from 363 bottom-set gill-net lifts distributed throughout Lake Michigan (including main basin and Green Bay) between April and November in 1930–1932. Data collected from the R/V Fulmar were recorded in notebooks and are now archived at the U.S. Geological Survey’s Great Lakes Science Center. Each lift included 1–7 gangs of linen gill nets. Each gang comprised 3–5 panels each having a length of 155 m, a height of 1.5 m, and a (stretch-)mesh size of either 60, 64, 67, 70, or 76 mm. The digitization of the Fulmar data notebooks was started in the late 1990s and finished in this study.
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This data release contains estimates of mean daily gross primary production (GPP) and ecosystem respiration (ER) in Bronson and Fanno Creeks, Oregon during August of 2016. These estimates were part of a larger study of the water-quality effects of beaver dams and beaver activity in selected urban streams of the Tualatin River Basin in northwestern Oregon. The mean daily GPP and ER values were estimated using two approaches (both of which are publicly available and documented): 1) a USGS model developed using the R programming language and 2) a Washington Department of Ecology model that runs in Excel. Inputs for the models included hourly measurements of dissolved-oxygen concentration, water temperature, photosynthetically...
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The Fluvial Egg Drift Simulator (FluEgg) estimates bighead, silver, and grass carp egg and larval drift in rivers using species-specific egg developmental data combined with user-supplied hydraulic inputs (Garcia and others, 2013; Domanski, 2020). This data release contains results from 240 FluEgg 4.1.0 simulations of bighead carp eggs in the Illinois River under steady flow conditions. The data release also contains the hydraulic inputs used in the FluEgg simulations and a KML file of the centerline that represents the model domain. FluEgg simulations were run for all combinations of four spawning locations, six water temperatures, and ten steady flow conditions. Each simulation included 5,000 bighead carp eggs,...
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These data were compiled for a manuscript in which 1) we develop a water temperature model for the major river segments and tributaries of the Colorado River basin, including the Colorado, Green, Yampa, White, and San Juan rivers; 2) we link modeled water temperature to fish population data to predict the probability native and nonnative species will be common in the future in a warming climate; and 3) assess the degree to which dams create thermal discontinuity in summer in river segments across the western US. Per goal #1, we developed a water temperature model using data spanning 1985-2015 that predicts water temperature every 1 mile (1.6-km) in rivers both now and in the future due to the potential influence...
Tags: Aquatic Biology, Arizona, Arkansas River basin, Black Rocks, Colorado, All tags...
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Ecological models facilitate evaluation and assessment of alternative plans for restoring the Greater Everglades ecosystem. Modeling outputs were used in evaluations of alternative water control plans to be performed by the Combined Operational Plan (COP). The models used were: (1) Cape Sable Seaside Sparrow Marl Prairie Indicator in conjunction with (2) Cape Sable Seaside Sparrow Helper, (3) Florida apple snail (native) population model (EverSnail), (4) Wader Distribution Evaluation Modeling (WADEM), (5) Small-sized freshwater fish density, and (6) Alligator production probability (i.e., habitat suitability index (HSI)). These ecological models are used to examine potential impacts on the above listed flora and...
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Acanthurid surgeonfishes are an abundant and diverse group of herbivorous fishes on coral reefs. While their contribution to trophic linkages and dynamics in coral reef systems has received considerable attention, the role of linkages involving their parasites has not. As both consumers of fish tissue and prey to microcarnivores, external parasites can play a significant role in trophic transfer between the primarily algae-based food source and the broader coral reef community. Stable isotope analysis is a common tool for studying trophic linkages, which can be used for studies involving parasites. These data were collected to examine the stable isotope ecology (13C and 15N) of copepod (Caligus atromaculatus) and...
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An important physiological constraint influencing distributions of coastal freshwater organisms is their tolerance for saline conditions. We experimentally evaluated salinity tolerance for three freshwater mussel species (Utterbackia imbecillis, Elliptio jayensis, and Glebula rotundata). Mussels were transferred abruptly from well water to one of five treatments (0 [control], 6, 12, 18 or 24 parts per thousand [ppt]) with no acclimation. Utterbackia imbecillis survived on average about 2 days at treatments ≥ 6 ppt, while Elliptio jayensis survived slightly longer (about 4 days). Glebula rotundata was most tolerant to salinity, surviving as well at 6 and 12 ppt as it did in the control. Additionally, G. rotundata...
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To support research on remote sensing of rivers, hyperspectral image data and supporting field measurements of water depth obtained with a multibeam echosounder were acquired from a segment of the Kootenai River in northern Idaho, September 26 and 27, 2017. These data sets also facilitate efforts to characterize in-stream habitat for sturgeon, understand and model dispersion processes, and monitor geomorphic change along the Kootenai River. This parent data release includes links to child pages for the following data sets: 1) airborne hyperspectral image data acquired from a conventional, manned, fixed-wing aircraft; 2) ground-based depth measurements obtained during a multibeam echosounder survey; and 3) in...
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In 2015-2016, the Ohio Division of Wildlife’s undercover law enforcement purchased 1,200 grass carp (Ctenopharyngodon idella). Fish heads and eyeballs were sent overnight to U.S. Geological Survey Wetland and Aquatic Research Center for ploidy analysis. Field and laboratory standard operating procedures were established and followed. Fish lengths, fish weights, and eyeball weights were obtained from the U.S. Fish and Wildlife Service’s feral carp ploidy program for grass carp and black carp (Mylopharyngodon piceus) and the Ohio grass carp. Internal 2µm or 4µm bead standards were used in establishing nuclear sizes from Nile tilapia (Oreochromis niloticus), known diploid (n=20) and triploid (n=20) carp blood, as well...
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This dataset contains information on all snakehead fishes found in the United States. It is a subset of a larger database, the Nonindigenous Aquatic Species Database (NAS). This information resource is an established central repository for spatially referenced biogeographic accounts of introduced aquatic species. The NAS website provides scientific reports, online/real-time queries, spatial data sets, distribution maps, fact sheets, and general information.
The U.S. Geological Survey maintains a program of water-quality studies in San Francisco Bay (CA) that began in 1969. This U.S.G.S. Data Release is a continuation of the previously published 1969-2015 dataset (Cloern and Schraga, 2016; Schraga and Cloern, 2017), it will archive and make available all measurements from 2016 and thereafter. Each year, a data file containing the previous year’s data will be added. Water-quality constituent measurements include salinity, temperature, light attenuation coefficient, and concentrations of chlorophyll-a, dissolved oxygen, suspended particulate matter, and dissolved inorganic nutrients (nitrate, nitrite, ammonium, phosphate and silicate). The sampling is conducted at least...
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Bullseye snakehead, Channa marulius, was first detected in 2000 in the southern Florida town of Tamarac and has been expanding its geographic range. Environmental DNA (eDNA) analysis is a newly-developed technique used to non-invasively detect cryptic or low-density species, or those that are logistically difficult to study. Genetic material shed into the environment through tissue and body fluids is concentrated from water samples and analyzed for the presence of target species eDNA. To help delineate bullseye snakehead’s geographic range, we developed and validated a species-specific eDNA assay for both quantitative and droplet digital PCR (ddPCR). We then used ddPCR to assess 16 locations in southeast Florida...


map background search result map search result map Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14 Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14, Appendix 3 Dataset for Alaska Marine Fish Ecology Catalog Distribution and status of five non-native fish species in the Tampa Bay drainage (USA), a hot spot for fish introductions-Data Data collected in 2008-2014 to assess nearshore subtidal community responses to increased sediment load during removal of the Elwha River dams, Washington State, USA Establishing a standard ploidy assessment method using grass carp from Ohio, 2015-2016 Salinity tolerance among three freshwater mussels (Bivalvia: Unionidae) from Gulf Coastal Plain drainages Hyperspectral image data and multibeam echosounder surveys used for bathymetric mapping of the Kootenai River in northern Idaho, September 26-27, 2017 Snakehead fishes in the United States of America Bullseye snakehead environmental DNA data, and associated attributes, collected from southeast Florida, from 2015-2018 Water-Quality, Bed-Sediment, and Invertebrate Tissue Trace Element Concentrations for Tributaries in the Clark Fork Basin, Montana, October 2017 - September 2018 1930-1932 Gill net data from Lake Michigan Ecological modeling output for the Combined Operational Plan, Round 3 in the Greater Everglades, 2018-2019 Estimates of mean daily gross primary production and ecosystem respiration in beaver-affected reaches along Bronson and Fanno Creeks, OR Stable isotope dynamics of herbivorous reef fishes and their ectoparasites: 2012, 2013, 2018 Fluvial Egg Drift Simulator (FluEgg) Results for 240 Simulations of Bighead Carp Egg and Larval Drift in the Illinois River Water temperature models, data and code for the Colorado, Green, San Juan, Yampa, and White rivers in the Colorado River basin Hydroacoustic data from central Lake Erie, 2010-2019 Hyperspectral image data and multibeam echosounder surveys used for bathymetric mapping of the Kootenai River in northern Idaho, September 26-27, 2017 Stable isotope dynamics of herbivorous reef fishes and their ectoparasites: 2012, 2013, 2018 Estimates of mean daily gross primary production and ecosystem respiration in beaver-affected reaches along Bronson and Fanno Creeks, OR Distribution and status of five non-native fish species in the Tampa Bay drainage (USA), a hot spot for fish introductions-Data Ecological modeling output for the Combined Operational Plan, Round 3 in the Greater Everglades, 2018-2019 Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14 Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14, Appendix 3 Hydroacoustic data from central Lake Erie, 2010-2019 Bullseye snakehead environmental DNA data, and associated attributes, collected from southeast Florida, from 2015-2018 Water-Quality, Bed-Sediment, and Invertebrate Tissue Trace Element Concentrations for Tributaries in the Clark Fork Basin, Montana, October 2017 - September 2018 Fluvial Egg Drift Simulator (FluEgg) Results for 240 Simulations of Bighead Carp Egg and Larval Drift in the Illinois River Salinity tolerance among three freshwater mussels (Bivalvia: Unionidae) from Gulf Coastal Plain drainages 1930-1932 Gill net data from Lake Michigan Establishing a standard ploidy assessment method using grass carp from Ohio, 2015-2016 Water temperature models, data and code for the Colorado, Green, San Juan, Yampa, and White rivers in the Colorado River basin Dataset for Alaska Marine Fish Ecology Catalog Snakehead fishes in the United States of America