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This dataset contains the results of a laboratory chronic bioassay with 6-week-old juvenile mussels (Fatmucket, Lampsilis siliquoidea) in a 28-day zinc exposure (120 and 240 micrograms zinc per liter) with endpoints of survival and growth (biomass and length) following standard ASTM methods. Surviving mussels were transferred from the control and treatment groups into a culture pond and their survival and growth were monitored for 56 days. In this data release we report individual biological, chemical, and water quality measurements from the laboratory toxicity test exposure and pond grow-out period.
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This dataset describes mercury (Hg) stable isotope values in fish dorsal muscle from different freshwater environments across the globe. Fish were collected at numerous field sites in North America, South and Central America, Africa, and Asia from 2006-2020. Sub-samples were provided by cooperators to the U.S. Geological Survey Mercury Research Laboratory and the University of Wisconsin for mercury stable isotope analysis. Samples were analyzed for mercury stable isotopes from 2017-2021. These specimens represent multiple trophic levels and body sizes from different food webs and when adequate mass was available, multiple species from the same food web were examined. Cooperators include, but are not limited to:...
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Data were collected as part of a long-term capture-recapture program to assess the population dynamics of two long-lived, federally endangered catostomids in Upper Klamath Lake, Oregon. Lost River suckers (LRS; Deltistes luxatus) and shortnose suckers (SNS; Chasmistes brevirostris) have been captured and tagged with passive integrated transponder (PIT) tags during their spawning migrations in each year since 1995. Cormack-Jolly-Seber (CJS) open population capture-recapture models were used to estimate annual survival probabilities, and a reverse-time analog of the CJS model was used to estimate recruitment of new individuals into the spawning population. In addition, data on the size composition of captured fish...
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This data release contains environmental and quality control results for chemical, biological, and physical sampling of water and bed sediment from Albemarle Sound and associated tributaries between 2012 and 2014 referenced in USGS OFR 2016-1171. Appendix 1 contains all quality control results to characterize the bias and variability of sampling, handling, and analysis of water, phytoplankton, and bed sediment samples. Appendix 2 contains all the chemical, biological, and physical results for water samples collected in July and August of 2012. Appendix 3 contains all the chemical, biological, and physical results for water samples collected from March 2013 to February 2014. Data are included for discrete samples...
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Data were collected in association with the application of two physical barrier treatments, bentonite clay (a sealing agent) and expanding foam (an insulation sealant), in natural pond-burrows to suppress or kill the invasive red swamp crayfish (Procambarus clarkii). Data include burrow diameter and depth, crayfish sex and size, and determination of the treatment reaching the burrow chamber.
Hydroacoustic estimates of fish density are used for fisheries management in central Lake Erie. Hydroacoustic data were collected along up to four cross-lake transects in central Lake Erie July 2010 through July 2019. Software-generated raw variables used for calculating estimates of hydroacoustic fish densities are presented here.
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The data in this release were used to help evaluate and understand the distribution of fish and invertebrates as well as ecological response to streamflow, water temperature, and water chemistry within the Fountain Creek Basin. This data release consists of invertebrate data collected between 1985 and 2022, fish data collected between 2003 and 2022, as well as the data neccesary to recreate the tables and figures in the associated U.S. Geological Survey Scientific Investigations Report (http://dx.doi.org/10.3133/sirXXXXXXXX). See Zuellig and others (2022) for sampling methodology and site information.
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These data were used to describe temporal trends in fish communities in the Fountain Creek basin. Fish data were collected between 2003 and 2022. Datasets include fish frequency of occurrence and flathead chub catch per unit of effort. Description of fish sampling methodology are documented in the associated publication (https://doi.org/10.5066/P9PUY4FC).
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Periphyton is a complex community of detritus, bacteria, fungi, and algae that grows attached to submerged substrates. Assemblage structure data for algae and cyanobacteria from periphyton samples were collected on a monthly basis from 2017 to 2021. Compiled data were reported as absolute abundance (cells) and biovolume per volume as well as absolute abundance (cells) and biovolume per area at four locations increasing in distance East of the L-67 canal in Water Conservation Area 3 (WCA 3) of the Florida Everglades immediately north of Everglades National Park. The periphyton assemblages were analyzed for five sample types including periphyton plates (Plates), invertebrate inclusion and exclusion plates (Inverts),...
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These data were compiled here to fit various versions of Bayesian population models and compare their performance, primarily the time required to make inferences using different softwares and versions of code. The humpback chub data were collected by US Geological Survey and US Fish and Wildlife service in the Colorado and Little Colorado Rivers from April 2009 to October 2017. Adult fish were captured using hoop nets and electro-fishing, measured for total length and given individual marks using passive integrated transponders that were scanned when fish were recaptured. The other three datasets were collected by US Forest Service. Owl data for the N-occupancy model was collected between 1990 and 2015. Owl data...
This metadata record presents analytical results for laboratory microcosms conducted during 2016–18 as part of a study to develop a field test and numerical interpretation method to determine the effective diffusion coefficients and sorption coefficients of trichloroethene (TCE) and daughter products in the rock matrix of sedimentary rock, as well as biodegradation rate coefficients in the borehole. The biodegradation rate coefficients in the borehole are an important component of defining the back-diffusion of TCE from the matrix of sedimentary rock. Microcosm experiments were conducted with microbial community samples and groundwater collected from boreholes in the field test area to define anaerobic biodegradation...
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These data were compiled to examine rates of skipped migration in adult humpback chub that spawn in the Little Colorado River (LCR). These data include mark-recapture information from the lower 13.56 kilometers of the LCR and from the Colorado River, from river kilometer 105.5-145.7 downstream of Glen Canyon Dam. Data also include detections from a multiplexer array (MUX) that is located in the LCR and from submersible PIT tag antennas that are deployed in parts of the Colorado River. These data are capture histories that include both spring and fall sampling events that occurred between spring 2009 and spring 2019. Capture histories can include information about size (small adults being 200-249mm total length and...
Tags: Aquatic Biology, Arizona, Colorado River, Ecology, Geography, All tags...
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The Bonnet Carré Spillway (BCS), located about 28 miles northwest of New Orleans, was constructed by the US Army Corp of Engineers in the early 1930s as part of an integrated flood-control system for the lower Mississippi River (MR). The BCS control structure consists of 350 individual bays that can be opened to divert water from the river to Lake Pontchartrain to relieve pressure on downstream levees. Lake Pontchartrain (LP) is hydrologically connected to the Mississippi Sound (MS Sound) and the Gulf of Mexico and is more accurately characterized as an estuarine embayment. BCS openings have occurred twelve times prior to 2019 because of high Mississippi River stages, typically in late spring. In 2019, the spillway...
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Adult walleye (10 females and 10 males) were caught in Fox River (Wisconsin) during April 2014. Total length, weight, and age were determined for each of the walleye. Whole-fish homogenates were prepared during 2017. Lipid concentration and polychlorinated biphenyl (PCB) congener concentrations were determined in each of the homogenates during 2017-2018. For each sample, PCB congener concentrations were summed to yield total PCB concentration. All lipid and PCB congener terminations were made at the University of Michigan School of Public Health in Ann Arbor, Michigan.
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We used visual surveys to document the presence of all life stages of Cascades frog (Rana cascadae) at historically occupied sites. We surveyed 67 sites 1-2 times between May and August of 2018 and 2019. This effort was a continuation of 2001-2004 surveys conducted at the same site pool. This dataset includes counts of amphibians, reptiles, and fish observed during each site survey, as well as habitat covariates.
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Ecological assessment data from the USGS National Water-Quality Assessment Program and the USEPA National River and Stream Assessment were reviewed and records were retained from sampling sites co-located with active USGS stream gages. A limited amount of ancillary data, including location, physical watershed features, and basic water chemistry data for each site were also retained.
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The data set includes the macroinvertebrate metrics calculated by IDAS software (Cuffney 2003, USGS OFR 03-172) for the Midwest Stream Quality Assessment (MSQA). Invert data is taxonomic data that has been summarized into variables called metrics that summarize various components of the taxonomic data. The original taxonomic data comes from USGS BioData.
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A newer version of these data is available at https://doi.org/10.5066/P94BH3W0. Grass Carp Ctenopharyngodon idella was imported to the United States in the 1960s for research into its usefulness as a biocontrol agent for nuisance aquatic vegetation. Escapees and intentionally stocked individuals founded wild, spawning populations in the Mississippi River and tributaries to the Laurentian Great Lakes. USGS-led research on the Sandusky River, a tributary to Lake Erie, demonstrated spawning of Grass Carp in 2015. In 2017, sampling with ichthyoplankton nets in the Sandusky River produced thousands of fertilized eggs on four dates during two distinct spawning events. We used published keys to estimate developmental...
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These data describe the distribution and abundance of Hydropsyche, a widespread and diverse genus of net-spinning caddisflies, in the Colorado River Basin. Abundance data, measured as catch rates, were collected by citizen scientists using light traps. We subsampled Hydropsyche spp. from light trap samples collected throughout the Colorado River Basin and measured the lengths and widths of mesothoracic tibia and first tarsal segments. Samples and measurements were processed at Grand Canyon Monitoring and Research Center in Flagstaff, AZ.
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These data represent the standard curve values as well as measurements of cytokine and reference gene transcripts from blood samples collected from Florida manatees and quantified using quantitative PCR.


map background search result map search result map Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14 Multi-stressor Predictive Models of Invertebrate Condition in the Corn Belt, U.S.A. Matched ecological assessment and stream gaging data for the CONUS Quantitative PCR standard curve and transcript values for the Florida manatee (Trichechus manatus latirostris), derived from 2013-14 manatee health assessments in Crystal River and Titusville, Florida Developmental Stages of Grass Carp (Ctenopharyngodon idella) eggs in the Sandusky River in 2017 Polychlorinated biphenyl concentrations in adult walleye from the Fox River (Wisconsin) population, 2014 Adult net-spinning caddisfly (Hydropsyche spp.) catch rates and morphology from large rivers of the southwestern United States, 2015-2016 Cascades frog (Rana cascadae) historical site surveys in the Oregon Cascade Range, 2018-2019 Marginalizing Bayesian population models - data for examples in the Grand Canyon region, southeastern Arizona, western Oregon USA - 1990-2015 Benthic Algae and Phytoplankton Community and Toxin Data for Selected Stations in the Mississippi Sound, 2019 Humpback chub spring and fall capture histories in the Little Colorado River, 2009-2019 Hydroacoustic data from central Lake Erie, 2010-2019 Volatile Organic Compound and Other Analyses Associated with Laboratory Microcosm Experiments to Determine Biodegradation Rates in Fractured Sedimentary Rock at the Former Naval Air Warfare Center in West Trenton, New Jersey, 2016–18 Status and trends of adult Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) sucker populations in Upper Klamath Lake, Oregon, 2023 Mercury Stable Isotope Assessment of Global Food Webs Survival and growth of the freshwater mussel Lampsilis siliquoidea during a 28-day chronic zinc exposure and subsequent grow-out period Crayfish morphometric measurements, burrow attributes and occupancy in response to physical burrow barriers Datasets for Evaluation and Review of Ecology Focused Stream Studies to Support Cooperative Monitoring, Fountain Creek Basin, Colorado Fish Datasets for Evaluation and Review of Ecology Focused Stream Studies to Support Cooperative Monitoring, Fountain Creek Basin, Colorado Decompartmentalization Physical Model (South Florida Water Management District) Periphyton Abundance and Biovolume Data 2017–21 Crayfish morphometric measurements, burrow attributes and occupancy in response to physical burrow barriers Survival and growth of the freshwater mussel Lampsilis siliquoidea during a 28-day chronic zinc exposure and subsequent grow-out period Volatile Organic Compound and Other Analyses Associated with Laboratory Microcosm Experiments to Determine Biodegradation Rates in Fractured Sedimentary Rock at the Former Naval Air Warfare Center in West Trenton, New Jersey, 2016–18 Decompartmentalization Physical Model (South Florida Water Management District) Periphyton Abundance and Biovolume Data 2017–21 Developmental Stages of Grass Carp (Ctenopharyngodon idella) eggs in the Sandusky River in 2017 Status and trends of adult Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) sucker populations in Upper Klamath Lake, Oregon, 2023 Benthic Algae and Phytoplankton Community and Toxin Data for Selected Stations in the Mississippi Sound, 2019 Associated data for Water Quality and Sediment Quality in the Albemarle Sound, North Carolina, 2012–14 Hydroacoustic data from central Lake Erie, 2010-2019 Polychlorinated biphenyl concentrations in adult walleye from the Fox River (Wisconsin) population, 2014 Humpback chub spring and fall capture histories in the Little Colorado River, 2009-2019 Cascades frog (Rana cascadae) historical site surveys in the Oregon Cascade Range, 2018-2019 Adult net-spinning caddisfly (Hydropsyche spp.) catch rates and morphology from large rivers of the southwestern United States, 2015-2016 Multi-stressor Predictive Models of Invertebrate Condition in the Corn Belt, U.S.A. Marginalizing Bayesian population models - data for examples in the Grand Canyon region, southeastern Arizona, western Oregon USA - 1990-2015 Matched ecological assessment and stream gaging data for the CONUS Mercury Stable Isotope Assessment of Global Food Webs