Filters: Tags: environmental DNA (X) > Categories: Data Release - Revised (X)
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Acetylene (C2H2) is a molecule rarely found in nature, with few known natural sources, but acetylenotrophic microorganisms can use acetylene as their primary carbon and energy source. As of 2018 there were 15 known strains of aerobic and anaerobic acetylenotrophs, however we hypothesized that there may be yet unrecognized diversity of acetylenotrophs in nature. In this study, we expanded this diversity by isolating an aerobic acetylenotroph, Bradyrhizobium sp. strain I71, from trichloroethene (TCE)-contaminated soils undergoing bioremediation. TCE-contaminated soils from the NASA Ames Research Center in California were used to establish soil microcosms with acetylene as the primary carbon substrate and acetylene...
This dataset has been archived; it has been superseded by version 4.0 (November 2022) which can be found at https://doi.org/10.5066/P9ZCMH8S. The dataset is composed of two tables containing environmental DNA (eDNA) data and site location information from round goby (Neogobius melanostomus) surveys conducted on parts of the Champlain Canal and upper Hudson River in New York during 2022. First posted May 5, 2022, ver. 1.0 Revised June 2022, ver. 2.0 Revised August 2022, ver. 3.0
Columns of data representing Chehalis River tributary, sample reach locations, dates of water sampling, quantitative PCR results, and whether lamprey were sampled by electrofishing in each sample reach. ***Please note that the title of this data release used to be "Environmental DNA surveys for lampreys in Chehalis River tributaries, Washington, from 2015 and 2017," but was updated for version 2.0.
Categories: Data,
Data Release - Revised;
Tags: Chehalis River,
USGS Science Data Catalog (SDC),
biota,
environmental DNA,
lampreys
We compiled electrofishing and habitat data sampled from 1990 to 2019 in the Harney Basin by the US Geological Survey (USGS), Oregon Department of Fish and Wildlife (ODFW) and the High Desert Partnership (HDP) to describe native and non-native fish distributions and their habitat associations. USGS collected eDNA data in 2019 to refine the known distributions of common carp (Cyprinus carpio). Site transect length, channel width, depth, and gradient were recorded concurrently with fish sampling. Site elevation was derived from statewide digital elevation models (DEM). We used Tableau, a visualization platform, to display fish distributions in the Harney Basin. This data release supersedes Laramie, M.B., Mejia, F.H.,...
Categories: Data,
Data Release - Revised;
Tags: Aquatic Biology,
Catlow Valley,
Chewaucan,
Ecology,
Fort Rock,
Prior to the initiation of translocation efforts in 2017, Pacific lamprey (Entosphenus tridentatus) were last documented in the Okanogan river subbasin in 2010. It appears as if lamprey were extirpated in the Okanogan subbasin some time shortly after that. However, until 2017, monitoring and management actions for lamprey were minimal in the Okanogan subbasin. This lack of monitoring has resulted in a large gap in understanding of the recent historical status of Pacific lamprey distribution throughout the Okanogan subbasin. Recent (beginning in 2017) translocation efforts have helped to rebound or reestablish lamprey in the Okanogan subbasin. Analysis of archived eDNA samples from the Okanogan river and its tributaries...
Categories: Data,
Data Release - Revised;
Tags: Aquatic Biology,
British Columbia,
Columbia Basin,
Ecology,
Entosphenus tridentatus,
Environmental DNA quantitative PCR results for water samples collected in 2018 at USGS streamgages downstream of Columbia River Basin reservoirs that are considered to have moderate to high suitability for invasive dreissenid mussels. Water samples were tested for DNA of dreissenid mussels, kokanee salmon, and yellow perch. This is version 1.1 of this data release. The Kokanee_Perch_eDNA data and metadata files have been revised to correct for improper attribution of 16 samples. For access to previous versions, please contact the Point of Contact identified on this page. First Posted March 29, 2019 Revised July 19, 2019, ver 1.1
Categories: Data,
Data Release - Revised;
Tags: Aquatic Biology,
Ecology,
Pacific Northwest,
Snake River,
USGS Science Data Catalog (SDC),
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