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This dataset provides timeseries data on water quality and quantity, as collected or computed from outside sources. The format is many tables with one row per time series observation (1 tab-delimited file per site-variable combination, 1 zip file per site). This compilation of data is intended for use in estimating or interpreting metabolism. Sites were included if they met the initial criteria of having at least 100 dissolved oxygen observations and one of the accepted NWIS site types ('ST','ST-CA','ST-DCH','ST-TS', or 'SP'). This dataset is part of a larger data release of metabolism model inputs and outputs for 356 streams and rivers across the United States (https://doi.org/10.5066/F70864KX). The complete release...
Tags: 007, 012, AK, AL, AR, All tags...
The mechanisms controlling the photosynthetic performance of C4 plants at low temperature were investigated using ecotypes of Bouteloua gracilis Lag. from high (3000 m) and low (1500 m) elevation sites in the Rocky Mountains of Colorado. Plants were grown in controlled-environment cabinets at a photon flux density of 700 μmol m−2 s−1 and day/night temperatures of 26/16 °C or 14/7 °C. The thermal response of the net CO2 assimilation rate (A) was evaluated using leaf gas-exchange analysis and activity assays of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco), phosphoenolpyruvate carboxylase (PEPCase) and pyruvate,orthophosphate dikinase (PPDK). In both ecotypes, a reduction in measurement temperature...
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This dataset provides input data formatted for use in estimating metabolism. The format is tables of prepared time series inputs (1 tab-delimited file per site, in 1 zip file per site). This dataset is part of a larger data release of metabolism model inputs and outputs for 356 streams and rivers across the United States (https://doi.org/10.5066/F70864KX). The complete release includes: modeled estimates of gross primary productivity, ecosystem respiration, and the gas exchange coefficient; model input data and alternative input data; model fit and diagnostic information; site catchment boundaries and site point locations; and potential predictors of metabolism such as discharge and light availability.
Tags: 007, 012, AK, AR, Aerobic respiration, All tags...
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Data provided here describe geochemical correction of carbon-14 in dissolved inorganic carbon (DIC) for groundwater age dating. Datasets include major ion chemistry of groundwater samples, model parameter inputs, and final corrected carbon-14 in DIC. Geochemical correction was completed in two phases: determination of reactive phase mole transfers through an inverse geochemical model (PHREEQC; Parkhurst and Appleo, 1992) and tracking of isotopic mass transfer among phases (NetpathXL; Parkhusrtand Charlton, 2008). Parkhurst, D.L., and Appelo, C.A.J., 2013, Description of input and examples for PHREEQC version 3—A computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical...
Tags: Cenozoic, Connecticut, Holocene, Idaho, Illinois, All tags...
Water use and carbon acquisition were examined in a northern Utah population of Juniperus osteosperma (Torr.) Little. Leaf-level carbon assimilation, which was greatest in the spring and autumn, was limited by soil water availability. Gas exchange, plant water potential and tissue hydrogen stable isotopic ratio (deltaD) data suggested that plants responded rapidly to summer rain events. Based on a leaf area index of 1.4, leaf-level water use and carbon acquisition scaled to canopy-level means of 0.59 mm day(-1) and 0.13 mol m(-2) ground surface day(-1), respectively. Patterns of soil water potential indicated that J. osteosperma dries the soil from the surface downward to a depth of about 1 m. Hydraulic redistribution...
The aridland shrub species, Artemisia tridentata (big sagebrush) and Chrysothamnus nauseosus (rubber rabbitbrush), are distributed widely in the Intermountain region of western North America. Earlier research indicated that A. tridentata can utilize upper soil water from transient summer rain events while C. nauseosus apparently cannot, although both species have similar rooting depths. Thus, we hypothesized that C. nauseosus relies more on deep water than A. tridentata, while A. tridentata can take advantage of soil moisture in upper soil layers. We examined this hypothesis by growing A. tridentata and C. nauseosus in two-layer pots in which soil water content in the upper and lower layers was controlled independently....
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Soil gas methane and combustible gas concentrations collected from oil and gas well pad locations in Utah. Soil gas samples were measured on site and/or collected for later analysis as described in supporting documentation. Multiple sample locations around well head and depths within the soil profile are available for select sites. Supporting documents provide information of sample collection protocol and data quality assurance.
Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Big Flat, Big Indian North, Big Indian South, Big Valley, Bluebell, All tags...
Circumstantial evidence suggests that Artemisia tridentata may out?compete Pinus ponderosa and P. jefferyi for water at ecotones between shrub steppe and montane forest vegetation in the Great Basin. Other studies indicate that within the shrub steppe Artemisia may act as a nurse plant for a third species of pine, P. monophylla. We used field experiments to study these contrasting effects of Artemisia on P. ponderosa and P. monophylla within the context of the distributional patterns in western Nevada of all three species on andesite, and on sites where hydrothermal activity has altered the andesite. At intermediate elevations in the Great Basin Artemisia and P. monophylla are restricted to unaltered desert soils,...
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This dataset provides site identifiers, details, and quality indicators. The format is a table with 1 row per site (tab-delimited file). This dataset is part of a larger data release of metabolism model inputs and outputs for 356 streams and rivers across the United States (https://doi.org/10.5066/F70864KX). The complete release includes: modeled estimates of gross primary productivity, ecosystem respiration, and the gas exchange coefficient; model input data and alternative input data; model fit and diagnostic information; site catchment boundaries and site point locations; and potential predictors of metabolism such as discharge and light availability.
Tags: 007, 012, AK, AL, AR, All tags...
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This dataset provides site locations as shapefile points. The format is a shapefile for all sites combined (.shp, .shx, .dbf, and .prj files). This dataset is part of a larger data release of metabolism model inputs and outputs for 356 streams and rivers across the United States (https://doi.org/10.5066/F70864KX). The complete release includes: modeled estimates of gross primary productivity, ecosystem respiration, and the gas exchange coefficient; model input data and alternative input data; model fit and diagnostic information; site catchment boundaries and site point locations; and potential predictors of metabolism such as discharge and light availability.
Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: 007, 012, AK, AL, AR, All tags...
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Populus fremontii (Fremont cottonwood) was once a dominant species in desert riparian forests but has been increasingly replaced by the exotic invasive Tamarix ramosissima (saltcedar). Interspecific competition, reduced flooding frequency, and increased salinity have been implicated in the widespread decline of P. fremontii. To elucidate some of the multiple and interacting mechanisms of this decline, we examined ecological processes in a control stand of P. fremontii along the Colorado River in Utah, USA, as well as a disturbed stand characterized by high groundwater salinity and invasion of T. ramosissima. Sap flux data showed that P. fremontii at the saline site experienced large reductions in afternoon canopy...
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The University of Hawaiʻi at Mānoa and the U.S. Geological Survey, in cooperation with the County of Maui Department of Water Supply and the State of Hawaiʻi Commission on Water Resource Management, initiated a field data-collection program to provide information for evaluating how rates of water vapor and carbon dioxide exchange are dependent on plant species type within forested areas on the island of Maui. The field data collection is part of a study to quantify the impacts of high-priority non-native and dominant native plant species on freshwater availability throughout the State of Hawaiʻi (https://archive.usgs.gov/archive/sites/hi.water.usgs.gov/studies/maui_eco/index.html). The overall objective of the study...
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This dataset provides model specifications used to estimate metabolism. The format is a table with 1 row per model (1 tab-delimited file, compressed into zip file). The specific format of this configuration file is arbitrary and specific to this analysis, and the format need not be replicated to use streamMetabolizer; however, this tabular format is useful because it allows for the reading by both humans and computers of (1) the combinations of sites and temporal resolutions for which models were run, (2) the timeseries data that were selected and combined to prepare the input to each model, and (3) the model specifications and parameters that were used in each model application. This dataset is part of a larger...
Tags: 007, 012, AK, AR, Aerobic respiration, All tags...
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This dataset provides key diagnostics and overall assessments of metabolism model performance. The format is a table with 1 row per model (1 tab-delimited file, compressed into zip file). See the accompanying publication for rationale for the choices of specific diagnostics. This dataset is part of a larger data release of metabolism model inputs and outputs for 356 streams and rivers across the United States (https://doi.org/10.5066/F70864KX). The complete release includes: modeled estimates of gross primary productivity, ecosystem respiration, and the gas exchange coefficient; model input data and alternative input data; model fit and diagnostic information; site catchment boundaries and site point locations;...
Tags: 007, 012, AK, AR, Aerobic respiration, All tags...
1. Microclimate was measured and photosynthetic responses to a climate warming manipulation were compared for the evergreen shrub Artemisia tridentata and the herbaceous forb Erigeron speciosus in the Rocky Mountains, Colorado, USA. 2. Soil was warmer and drier under infra-red heaters compared with control plots. 3. Midday xylem pressure potential did not differ for A. tridentata on heated vs control plots but was lower for E. speciosus on heated plots compared with controls. Leaf temperatures did not vary for the two species on heated or control plots. 4. There were no significant treatment or species differences in the diurnal patterns of CO2 assimilation or stomatal conductance to water vapour. Also, there were...
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This dataset provides daily metabolism estimates and potential predictor variables to support further exploration. The format is a table with 1 row per site-date combination (1 tab-delimited file, compressed into a zip file). This dataset is part of a larger data release of metabolism model inputs and outputs for 356 streams and rivers across the United States (https://doi.org/10.5066/F70864KX). The complete release includes: modeled estimates of gross primary productivity, ecosystem respiration, and the gas exchange coefficient; model input data and alternative input data; model fit and diagnostic information; site catchment boundaries and site point locations; and potential predictors of metabolism such as discharge...
Tags: 007, 012, AK, AR, Aerobic respiration, All tags...
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This dataset provides complete fits from metabolism estimation models. The format is 5 files per model (text and tab-delimited files, packaged as 1 zip file per model): (1) estimates of daily gross primary productivity (GPP), ecosystem respiration (ER), and the gas exchange coefficient (K600), (2) parameters for the model overall, (3) estimates of the nodes defining the piecewise line relating K600 to discharge, (4) parameters for the overall relationship between K600 and discharge, and (5) any warnings returned by the model. This dataset is part of a larger data release of metabolism model inputs and outputs for 356 streams and rivers across the United States (https://doi.org/10.5066/F70864KX). The complete release...
Tags: 007, 012, AK, AR, Aerobic respiration, All tags...
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This dataset provides shapefile outlines of the catchments contributing to sites where metabolism was or could have been estimated. The format is a shapefile for all sites combined (.shp, .shx, .dbf, and .prj files). This dataset is part of a larger data release of metabolism model inputs and outputs for 356 streams and rivers across the United States (https://doi.org/10.5066/F70864KX). The complete release includes: modeled estimates of gross primary productivity, ecosystem respiration, and the gas exchange coefficient; model input data and alternative input data; model fit and diagnostic information; site catchment boundaries and site point locations; and potential predictors of metabolism such as discharge and...
Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: 007, 012, AK, AL, AR, All tags...
* 1 In western North America, juniper trees (Juniperus spp.) are apparently encroaching into numerous communities including sagebrush-dominated (Artemisia tridentata) valleys, where, as density of juniper increases, the density and condition of sagebrush decline but juniper condition appears unaffected. * 2 We examined stable isotope proxies of plant gas exchange and relative depth of soil water extraction of Juniperus osteosperma and Artemisia tridentata as their relative densities changed across a transition zone in northern Utah, USA. Measurement of 13C and 18O of foliage allowed separation of the contributions of stomatal and biochemical factors to differences in mean intercellular CO2 concentration, while deuterium...


    map background search result map search result map Carbon acquisition and water use in a Northern Utah Juniperus osteosperma (Utah juniper) population. Gas exchange and growth responses of the desert shrubs Artemisia tridentata and Chrysothamnus nauseosus to shallow- vs. deep-soil water in a glasshouse experiment Shifts in depth of water extraction and photosynthetic capacity inferred from stable isotope proxies across an ecotone of Juniperus osteosperma (Utah juniper) and Artemisia tridentata (big sagebrush) Ecohydrology in a Colorado River riparian forest: implications for the decline of Populus fremontii Metabolism estimates for 356 U.S. rivers (2007-2017): 1. Site data Metabolism estimates for 356 U.S. rivers (2007-2017): 3. Timeseries data Geochemical Correction of Carbon-14 in Dissolved Inorganic Carbon used for Groundwater Age Dating in the Glacial Aquifer System, Conterminous United States Soil Methane and Combustible Gas Concentrations from Oil-Gas Well Pads in Utah, U.S.A. Metabolism estimates for 356 U.S. rivers (2007-2017): 5. Model configurations Metabolism estimates for 356 U.S. rivers (2007-2017): 4. Model inputs Metabolism estimates for 356 U.S. rivers (2007-2017): 6. Model outputs Metabolism estimates for 356 U.S. rivers (2007-2017): 7. Model diagnostics Metabolism estimates for 356 U.S. rivers (2007-2017): 8. Metabolism estimates and predictors Metabolism estimates for 356 U.S. rivers (2007-2017): 2b. Site catchment boundaries Metabolism estimates for 356 U.S. rivers (2007-2017): 2a. Site coordinates Leaf-level gas exchange and leaf-area index measurements collected at four study sites on the island of Maui, Hawai‘i, September 2017 – August 2018 Ecohydrology in a Colorado River riparian forest: implications for the decline of Populus fremontii Leaf-level gas exchange and leaf-area index measurements collected at four study sites on the island of Maui, Hawai‘i, September 2017 – August 2018 Soil Methane and Combustible Gas Concentrations from Oil-Gas Well Pads in Utah, U.S.A. Geochemical Correction of Carbon-14 in Dissolved Inorganic Carbon used for Groundwater Age Dating in the Glacial Aquifer System, Conterminous United States Metabolism estimates for 356 U.S. rivers (2007-2017): 5. Model configurations Metabolism estimates for 356 U.S. rivers (2007-2017): 4. Model inputs Metabolism estimates for 356 U.S. rivers (2007-2017): 6. Model outputs Metabolism estimates for 356 U.S. rivers (2007-2017): 7. Model diagnostics Metabolism estimates for 356 U.S. rivers (2007-2017): 8. Metabolism estimates and predictors Metabolism estimates for 356 U.S. rivers (2007-2017): 2b. Site catchment boundaries Metabolism estimates for 356 U.S. rivers (2007-2017): 2a. Site coordinates Metabolism estimates for 356 U.S. rivers (2007-2017): 1. Site data Metabolism estimates for 356 U.S. rivers (2007-2017): 3. Timeseries data