Filters: Tags: metabolomics (X)
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Data used in the Maumee River omics publication, Multi-omics responses in tree swallow (Tachycineta bicolor) nestlings from the Maumee Area of Concern, Maumee River, Ohio. Tseng et al. 2023 Sci. Total Environ. 856:159130
Categories: Data;
Tags: EROD,
Ecology,
Environmental Health,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Current soil enzyme methods measure potential enzyme activities, which are indicative of overall enzyme concentrations. However, they do not provide insight in the actual rates of enzymatically catalyzed reactions under natural in situ conditions. The objectives of this review are to (1) clarify what is being measured by current standard soil enzymology methods; (2) present an overview of the factors that control in situ activities of soil enzymes; and (3) evaluate how emerging technologies and modeling approaches could enhance our understanding of in situ extracellular enzyme activity (EEA). Genomic studies targeting functional genes coding for extracellular enzymes can identify the genetic potential of microbial...
Categories: Publication;
Types: Citation,
Journal Citation;
Tags: Soil Biology and Biochemistry,
exoenzymes,
extracellular enzyme activity,
functional genes,
genomics,
The data consists of targeted metabolite analysis (using quadrupole time-of-flight mass spectroscopy;UHPLC-QTOF-MS) of hemolymph from two freshwater mussel species (Lampsilis cardium and L. siliquoidea) from three streams in Indiana. Concentrations of metabolites were modeled by species, stream and sex to determine the influence of each parameter.
We combine cell assays and metabolomics to create a powerful tool, which emerges to elevate the identification of new control chemicals. We combined the use of bigheaded carp fry cell line with metabolite profiling to describe the dose response to thiram. Thiram is a registered pesticide commonly used as a fungicide in the field or as a seed protectant and is known to be toxic to fish. Seven concentrations of thiram were used to dose bighead carp fry cells and silver carp fry cells. We identified 700 metabolomic markers and 41 of those markers exhibited a dose response to thiram in the bighead carp fry cells. We identified 1590 metabolomic markers with 205 of those markers exhibited a dose response to thiram in...
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