Filters: Tags: numerical modeling (X)
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We developed the HyCReWW metamodel to predict wave run-up under a wide range of coral reef morphometric and offshore forcing characteristics. Due to the complexity and high dimensionality of the problem, we assumed an idealized one-dimensional reef profile, characterized by seven primary parameters. XBeach Non-Hydrostatic was chosen to create the synthetic dataset and Radial Basis Functions implemented in Matlab were chosen for interpolation. Results demonstrate the applicability of the metamodel to obtain fast and accurate results of wave run-up for a large range of intrinsic coral reef morphologic and extrinsic hydrodynamic forcing parameters, offering a useful tool for risk management and early warning systems....
All stream or river-channel flows are time variant, or unsteady, in a different degree; steady flow is but an exception rather than the rule. These flows usually exist in different states, such as sub-critical, super-critical, and trans-critical flows. Alternative terms for different flow conditions are often used, such as continuous or discontinuous flows, flows through hydraulic jump or through channel constriction. A river basin, the basic geometric unit of the surface-water flow configurations, generally contains river reaches, branches, tributaries, junctions, and networks. Reasonable and rational definition and determination of all-weather, river-basin, unsteady flows, letting the last three quantifiers...
Categories: Project;
Tags: Computer Simulation,
Estuarine Flows,
Flood Flows,
Numerical Modeling,
River Basin,
This model archive contains the Soil-Water-Balance (SWB) model used to simulate potential mean annual recharge in the Grand Canyon region for 1981 through 2016. The simulated results are described in the associated U.S. Geological Survey Scientific Investigations Report 2022-5037. The model archive includes all the necessary files to document and run the SWB model and process the results as displayed in the accompanying report. The directories in the archive are presented each as a separate .zip file and include an "ancillary" directory, a "bin" directory, a "georef" directory, a "model directory, an "output" directory, and a "source" directory. There is a README file describing all the files and directories in...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Grand Canyon,
Groundwater Recharge Model,
Hydrology,
SWB,
USA,
Resource managers conduct landscape-level monitoring using environmental DNA (eDNA). These managers must contend with imperfect detection in samples and sub-samples (i.e., molecular analyses). This imperfect detection impacts their ability to both detect species and estimate occurrence. Although occurrence (synonymously occupancy) models can estimate these probabilities, most models and guidance for their application do not consider three levels. This simulated dataset assumes sites are occupied (probably psi =1, Z = 1 ) and simulates sample (probability theta, A = 0,1) and subsample (probability p, Y = 0, 1) occurrence probabilies and detections (1)/non-detections (0).
This data release includes the XBeach input data files used to evaluate the importance of explicitly modeling sea-swell waves for runup. This was examined using a 2D XBeach short wave-averaged (surfbeat, XB-SB) and a wave-resolving (non-hydrostatic, XB-NH) model of Roi-Namur Island on Kwajalein Atoll in the Republic of Marshall Islands. Results show that explicitly modelling the sea-swell component (using XB-NH) provides a better approximation of the observed runup than XB-SB (which only models the time-variation of the sea-swell wave height), despite good model performance of both models on reef flat water levels and wave heights. However, both models under-predict runup peaks. The difference between XB-SB and...
Using global climate model projections of sea-surface temperature at coral reef sites, we modeled the effects of depth and exposure to semidiurnal temperature fluctuations to examine how these effects may alter the projected year of annual severe bleaching for coral reef sites globally. Here we present the first global maps of the effects these processes have on bleaching projections for three IPCC-AR5 emissions scenarios.
Sediment grab samples were collected on the barriers and nearby seabed on and around Arey and Barter Islands, Alaska in July 2011 and analyzed for mean grain size. 43 terrestrial grab samples were collected along 14 shore-normal beach transects (12 on Arey Island and 2 on the western spit of Barter Island) at the seaward water line, the berm crest or top of the island, and at the lagoon water line. 11 seabed samples were collected using a small pipe dredge deployed from a small boat; 2 in the vicinity of deployed oceanographic instruments, 8 on the ocean side of Arey Island, and 1 in Arey Lagoon. Two of the grab samples were sieved and analyzed for grain size distributions. Mean grain size of remaining samples was...
Categories: Data;
Tags: Arctic National Wildlife Refuge,
Arctic Ocean,
Arey Island,
Arey Lagoon,
Barter Island,
This portion of the data release presents tabulated wave parameter results derived from simulations of wind generated surface gravity waves on an ancient lake on Mars. The phase-averaged wave model, SWAN, was applied within the Delft3D modeling system (Deltares, 2018) with reduced gravity and a range of atmospheric densities and wind speeds to simulate potential conditions that could generate wind waves on Mars.
Categories: Data;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Mars,
PCMSC,
Pacific Coastal and Marine Science Center,
This data set consists of physics-based Delft3D-FLOW and WAVE hydrodynamic models input files used for Coastal Storm Modeling System (CoSMoS) Tier 1 simulations. Tier 1 simulations cover the Northern California open-coast region, from the Golden Gate Bridge to the California/Oregon state border, and they provide boundary conditions to higher-resolution simulations. Simulations are run for several storm events (covering a range of no storm, 1-year, 20-year, and 100-year coastal storm conditions) and sea-level rise (SLR) scenarios.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Beaches,
CMHRP,
Climate Change,
ClimatologyMeteorologyAtmosphere,
Coastal and Marine Hazards and Resources,
This model archive contains files for a set of groundwater flow, particle tracking, and management optimization models that simulate the area around the Navy-Northrop-Grumman contamination plume on Long Island, New York. These models were developed as in insets from the Long Island Regional “parent” Model, from which perimeter boundary conditions were inherited. In addition to input and output files for these models, this archive contains the modeling workflow python code and source data used to build the model. These materials have been included for repeatability and decision transparency.
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Bethpage,
Groundwater,
Hydrology,
Long Island,
Long Island West,
Gradients in contaminant concentrations and isotopic compositions commonly are used to derive reaction parameters for natural attenuation in aquifers. Differences between field-scale (apparent) estimated reaction rates and isotopic fractionations and local-scale (intrinsic) effects are poorly understood for complex natural systems. For a heterogeneous alluvial fan aquifer, numerical models and field observations were used to study the effects of physical heterogeneity on reaction parameter estimates. Field measurements included major ions, age tracers, stable isotopes, and dissolved gases. Parameters were estimated for the O2 reduction rate, denitrification rate, O2 threshold for denitrification, and stable N isotope...
Categories: Publication;
Types: Citation;
Tags: denitrification,
groundwater,
numerical modeling,
sta
Estimated start date, end date, and duration of open water at a location fronting Barter Island, Alaska derived from projected sea ice extents in 4 global climate models: MIROC5, BCC-CSM1.1, INM-CM4, and GFDL-ESM2M. Starting and ending dates are when sea ice retreated or is projected to retreat offshore by more than 80 kilometers fronting Barter Island. Projected coastal storm events were derived by downscaling atmospheric conditions of the RCP 4.5 climate scenario with the MIROC5 global climate model (GCM). Sea ice retreat distances were estimated from 4 separate GCMs: MIROC5, BCC-CSM1.1, INM-CM4, GFDL-CM3.
Categories: Data;
Tags: Arctic National Wildlife Refuge,
Arctic Ocean,
Arey Island,
Arey Lagoon,
Barter Island,
Time-series measurements of waves, currents, water levels, sea surface temperatures, ocean salinity, and water, air, and ground temperatures were collected in July through September 2011 in and around Arey Lagoon, near Barter Island, Alaska. Directional wave spectra, currents, water levels, salinity, and bottom and surface water temperatures were measured with a bottom-mounted 1MHz Nortek AWAC, HOBO temperature loggers, and a Solinst Levelogger in ~5m water depth offshore of Arey Island. Within Arey Lagoon, a bottom-mounted frame equipped with a Nortek 1MHz Aquadopp, Solinst Levelogger, and HOBO temperature loggers measured currents, water levels, and water temperatures. Ground temperatures (maximum depth 3 meters...
Categories: Data;
Tags: Arctic National Wildlife Refuge,
Arctic Ocean,
Arey Island,
Arey Lagoon,
Barter Island,
This data release provides a wave model application and wave parameters derived from simulations of a schematized ancient lake on Mars. The phase-averaged wave model, SWAN, was applied within the Delft3D modeling system (Deltares, 2018) with reduced gravity and a range of atmospheric densities and wind speeds to simulate potential conditions that could generate wind waves on Mars. Wave modeling presented in this data release was combined with analysis of sedimentary structures observed in imagery collected by the Mars rover Curiosity to determine whether four examples of symmetrical, reversing, or straight-crested bedforms in Gale Crater sandstones are preserved wave ripples (Rubin and others, 2022). The presence...
Simulations of the period 2016-2099 were conducted using the Salish Sea hydrodynamic model to evaluate extreme water levels associated with anticipated changes in sea level and climate forcing. The model projections accounting for sea level position, tides, remote sea-level anomalies, local winds and storm surge and stream flows as they affect water density. Dynamically downscaled Weather Research and Forecasting (WRF) CMIP5 GFDL wind and atmospheric pressure fields were prescribed over the model open boundary and used to compute sea-level anomaly prescribed at the model ocean boundary. Simulations were made for eight different Sea-Level Rise (SLR) conditions, 0, 0.25, 0.5, 1, 1.5, 2, 3, and 5 meters relative to...
Categories: Data;
Tags: CMHRP,
Climate Change,
Coastal and Marine Hazards and Resources Program,
Distributions,
Extreme Weather,
The COAWST modeling system has been used to simulate ocean and wave processes along the of US East Coast and Gulf of Mexico. The grid has a horizontal resolution of approximately 5km and is resolved with 16 vertical terrain following levels. The model has been executed on a daily basis since 2010 with outputs written every hour. Data access is available through a Globus access portal here: https://app.globus.org/file-manager?origin_id=2e58c429-d1cf-4808-85a7-0d8214a4547e&origin_path=%2F References cited: Warner, J.C., Armstrong, Brandy, He, Ruoying, and Zambon, J.B., 2010, Development of a coupled ocean-atmosphere-wave-sediment transport (COAWST) modeling system: Ocean Modelling, v. 35, issue 3, p. 230-244. ...
Categories: Data;
Types: Map Service,
NetCDF OPeNDAP Service,
OGC WMS Layer;
Tags: CMG_Portal,
Earth Science > Human Dimensions > Natural Hazards > Floods,
Earth Science > Oceans > Marine Sediments >Sediment Transport,
Earth Science > Oceans > Ocean Circulation > Ocean Currents,
Earth Science > Oceans > Ocean Temperature > Potential Temperature,
The 14-m-tall Marmot Dam was removed during the summer of 2007, and the cofferdam protecting the working area was breached during a storm on October 19, 2007, allowing approximately 750,000 m3 of reservoir deposit to be eroded freely and released downstream to the Sandy River. Prior to the Marmot Dam removal, sediment transport models were developed to predict the transport dynamics of both gravel and sand, providing key pieces of information for stakeholders and regulatory agencies to select the most appropriate dam removal alternative. A monitoring program was implemented following dam removal that was designed to examine model predictions and assess when potential fish passage issues related to dam removal were...
Categories: Publication;
Types: Citation;
Tags: Dam removal,
Field observation,
Fish passage,
Model examination,
Monitoring,
Projections of marsh elevation change with WARMER-2 across five regions of the San Francisco Bay Delta (Cache Yolo, South Delta, North Delta, Central Delta, and Suisun). The model was run across a range of initial elevations for each region and for scenarios of sea-level rise (30, 61, 91, 122, 152, 183, 305 cm by 2100), sediment availability (historic, constant, declining, and increase), and with and without a temporally dynamic tidal range. Results from the Delta Simulation Model 2 hydrodynamic model were used to calculate rates of tide range increase with sea-level rise. WARMER-2 was calibrated using soil cores from Callaway et al 2012 (Rush Ranch and Browns Island cores), and a soil core from Miners Slough. ...
Categories: Data;
Tags: Brackish Marsh,
Delta,
Emergent Tidal Marsh,
Freshwater Tidal Marsh,
San Francisco Bay,
Numerically modeled ocean storm conditions of hindcast (1981-2010) and projected (2011-2100) storm events in the nearshore region of Arey Lagoon, Alaska. Storms were identified from time-series of dynamically downscaled deep-water wave conditions using WaveWatch3 (WW3) and nearshore storm surges using the Deltares Delft3D model. A storm was defined as having offshore water wave heights >= 2 meters (m) and storm surges >=0 m. The data in this file provide a listing of individual storm dates, storm duration, and the maximum offshore wave heights and resulting nearshore wave conditions (seas and swell) and storm surges associated with each storm. A series of hindcast and projected flooding extreme and decadal flood...
Categories: Data;
Tags: Arctic National Wildlife Refuge,
Arctic Ocean,
Arey Island,
Arey Lagoon,
Barter Island,
This dataset consists of physics-based XBeach Non-hydrostatic hydrodynamic models input files used to study how coral reef restoration affects waves and wave-driven water levels over coral reefs, and the resulting wave-driven runup on the adjacent shoreline. Coral reefs are effective natural coastal flood barriers that protect adjacent communities. Coral degradation compromises the coastal protection value of reefs while also reducing their other ecosystem services, making them a target for restoration. Here we provide a physics-based evaluation of how coral restoration can reduce coastal flooding for various types of reefs. These input files accompany the modeling conducted for the following publication: Roelvink,...
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