Filters: Tags: pallid sturgeon (X)
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Data consist of genotypes for pallid sturgeon and paddlefish broodstock and artificially-produced larvae at 19 sturgeon microsatellite loci and four paddlefish loci. Microsatellite genotypes allowed confirmation of homozygous sturgeon DNA and absence of paddlefish DNA in haploid gynogens. Data also consist of DNA yield estimates for haploid gynogens for proof of concept that haploid gynogens can provide sufficient DNA quantity for restriction site-associated DNA sequencing studies.
Abstract (from http://sp.lyellcollection.org/content/early/2015/10/09/SP408.11.abstract): We present a hierarchical series of spatially decreasing and temporally increasing models to evaluate the uncertainty in the atmosphere – ocean global climate model (AOGCM) and the regional climate model (RCM) relative to the uncertainty in the somatic growth of the endangered pallid sturgeon (Scaphirhynchus albus). For effects on fish populations of riverine ecosystems, climate output simulated by coarse-resolution AOGCMs and RCMs must be downscaled to basins to river hydrology to population response. One needs to transfer the information from these climate simulations down to the individual scale in a way that minimizes extrapolation...
Categories: Publication;
Types: Citation;
Tags: Fish,
Missouri River,
National CASC,
Wildlife and Plants,
fish,
This dataset includes measurements of flow, turbulence, and bathymetry generated from multibeam bathymetry for a short reach of the Missouri River at Searcys Bend (SB) near Huntsdale, Missouri. Flow and turbulence were characterized using a Signature 1000 mounted on an anchored moving boat and an Aquadopp mounted on a tripod near the bed. Repeat bathymetric measurements were made in small patches to characterize bedform movement during velocimetric instrument deployment. The mean daily discharge at the U.S. Geological Survey Streamflow gaging station 06909000 fifteen miles upstream at Boonville, Missouri on September 16, 2021 was 1,291 cubic meters per second.
This dataset describes the diameter, shape, settling velocity, and specific gravity of eggs from 9 female pallid sturgeon and 14 female shovelnose sturgeon as determined in laboratory studies. Pallid sturgeon and shovelnose sturgeon are believed to broadcast demersal eggs in the current, near the river bed over coarse substrate. It is hypothesized that eggs settle immediately following fertilization, but field conditions preclude direct observation. The dispersal of sturgeon eggs is affected by physical properties of the eggs and hydraulic conditions at the spawning location.
Categories: Data;
Tags: Columbia Environmental Research Center,
Fish,
USGS Science Data Catalog (SDC),
biota,
dispersal,
This model was based upon expert review, known habitat and known locations of the species. The model can be linked or joined via the "Seg_ID" to the streams layer used in this project. Using the "present" field, the predicted presence locations of the pallid sturgeon can be shown for every stream segment in the known range of the species within the study area. These data are provided by Bureau of Land Management (BLM) "as is" and may contain errors or omissions. The User assumes the entire risk associated with its use of these data and bears all responsibility in determining whether these data are fit for the User's intended use. The User is encouraged to carefully consider the content of the metadata file associated...
Abstract (from http://sp.lyellcollection.org/content/early/2015/05/21/SP408.10.abstract): In managing fish populations, especially at-risk species, realistic mathematical models are needed to help predict population response to potential management actions in the context of environmental conditions and changing climate while effectively incorporating the stochastic nature of real world conditions. We provide a key component of such a model for the endangered pallid sturgeon ( Scaphirhynchus albus) in the form of an individual-based bioenergetics model influenced not only by temperature but also by flow. This component is based on modification of a known individual-based bioenergetics model through incorporation...
Categories: Publication;
Types: Citation;
Tags: Fish,
Fish,
National CASC,
Wildlife and Plants,
pallid sturgeon
The study was designed to assess the strength of the innate linkage of substrate and food in foraging by early juvenile Pallid and Shovelnose Sturgeon and their hybrids and adult Sicklefin and Shoal Chub. The data include information on the fish weights throughout the duration of the experiment as well as observed fish behavior data. Wet weights from fish were recorded to monitor feeding consumption and the behavior data was generated in response to watching the fish during feeding. Information found in the fish weights data table includes the fish name, the tank number, the food treatment given, the light treatment given, the week of the trial, the date when the weight was taken, the substrate material, where food...
This child data release includes RGB (red-green-blue) videos acquired from an Unmanned Aircraft System (UAS) during a tracer experiment performed on the Missouri River near Columbia, Missouri, on May 5, 2021. One of the primary goals of this tracer experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) from various types of remotely sensed data in a large, highly turbid natural river channel. Previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, but the Missouri River is much more turbid. As a result, the effect of the dye on the reflectance of the water could be obscured by the effects of suspended sediment on reflectance....
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Columbia,
Missouri,
Missouri River,
Remote sensing,
concentration,
This child data release includes field spectra and in situ measurements of Rhodamine WT dye concentration acquired during a tracer experiment performed on the Missouri River near Columbia, Missouri, on May 5, 2021. One of the primary goals of this tracer experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) from various types of remotely sensed data in a large, highly turbid natural river channel. Previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, but the Missouri River is much more turbid. As a result, the effect of the dye on the reflectance of the water could be obscured by the effects of suspended sediment on reflectance....
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Columbia,
Missouri,
Missouri River,
Remote sensing,
concentration,
This dataset documents the number of normally developed hatched free embryos, abnormally developed hatched free embryos, and viable unhatched embryos from two laboratory trials (shovelnose sturgeon during April and pallid sturgeon during May 2016) in substrate conditions designed to simulate potential fates within a dynamic riverine environment. Trials were performed with substrate treatments that consisted of clean glass (control), gravel, medium-coarse sand, and fine sand-silt. Medium-coarse sand and fine sand-silt substrates were each tested three ways: unburied, partially buried, and fully buried (1–2 millimeter depth). Pallid sturgeon and shovelnose sturgeon embryos were exposed to trial conditions from the...
The data set contains sampling data, catch data, and biological data associated with a broad-scale experiment to examine free embryo dispersal and larval settlement of endangered pallid sturgeon (Scaphirhynchus albus) in the Missouri River of eastern Montana and western North Dakota. On 20190701, two age groups of pallid sturgeon including 771,707 1-day post-hatch (dph) free embryos and 200,786 5-dph free embryos were released in the Missouri River where dispersal in the water column was assessed through 150 miles. Following dispersal, beam trawl sampling of benthic habitats was conducted to verify settlement and quantify the spatial extent of settlement. Trawling was conducted for nine consecutive weeks from 20190716...
The data set contains sampling data, catch data, and biological data associated with a broad-scale experiment to examine free embryo dispersal and larval settlement of endangered pallid sturgeon (Scaphirhynchus albus) in the Missouri River of eastern Montana and western North Dakota. On 20190701, two age groups of pallid sturgeon including 771,707 1-day post-hatch (dph) free embryos and 200,786 5-dph free embryos were released in the Missouri River where dispersal in the water column was assessed through 150 miles. Following dispersal, beam trawl sampling of benthic habitats was conducted to verify settlement and quantify the spatial extent of settlement. Trawling was conducted for nine consecutive weeks from 20190716...
This data release includes field spectra, UAS-based RGB videos, and digital orthophotography acquired from a manned fixed-wing aircraft, as well as in situ measurements of turbidity and Rhodamine WT dye concentration acquired during a tracer experiment performed on the Missouri River near Columbia, Missouri, on May 5, 2021. One of the primary goals of this tracer experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) from various types of remotely sensed data in a large, highly turbid natural river channel. Previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, but the Missouri River is much more turbid. As a result,...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Columbia,
Ecology,
Geomorphology,
Hydrology,
This child data release includes fluorometer measurements of Rhodamine WT dye concentration and turbidity acquired during a tracer experiment performed on the Missouri River near Columbia, Missouri, on May 5, 2021. One of the primary goals of this tracer experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) from various types of remotely sensed data in a large, highly turbid natural river channel. Previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, but the Missouri River is much more turbid. As a result, the effect of the dye on the reflectance of the water could be obscured by the effects of suspended sediment on reflectance....
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Columbia,
Missouri,
Missouri River,
Remote sensing,
concentration,
This data release was produced by the U.S. Geological Survey (USGS) in cooperation with the Bureau of Reclamation to present the results of monitoring efforts on the Yellowstone River fish bypass channel according to the specifications of the Lower Yellowstone Adaptive Management and Monitoring Plan. The fish bypass channel was constructed to provide upstream migrating fish with a route around a diversion dam. The objective of this study is to monitor the physical and hydraulic characteristics of the bypass channel, including flow split, minimum depth for the deepest continuous 30 cross sectional feet, and mean channel velocity, which are summarized in the data files in this data release. Physical and hydraulic...
This child data release includes fluorometer measurements of Rhodamine WT dye concentration and turbidity acquired during a tracer experiment performed on the Missouri River near Columbia, Missouri, on May 5, 2021. One of the primary goals of this tracer experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) from various types of remotely sensed data in a large, highly turbid natural river channel. Previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, but the Missouri River is much more turbid. As a result, the effect of the dye on the reflectance of the water could be obscured by the effects of suspended sediment on reflectance....
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Columbia,
Missouri,
Missouri River,
Remote sensing,
concentration,
This dataset documents the length and developmental stage of pallid sturgeon and shovelnose sturgeon free embryos from the time of hatch through melanin plug expulsion (the approximate onset of exogenous feeding) reared in the laboratory at a constant temperature. Free embryos from 4 pallid sturgeon crosses and 7 shovelnose sturgeon crosses were reared separately in the laboratory at a mean temperature of 17.8 degrees Celsius (range 17.3–18.4 ). Beginning on the day of hatch, a minimum of three to six free embryos from each cross was randomly sampled and preserved in 10% neutral buffered formalin at 2 to 12-hour intervals, depending on age. Free embryos were microscopically examined and assigned a developmental...
Pallid sturgeon (Scaphirhynchus albus) status data created for the Western Division of the American Fisheries Society (WDAFS)
This child data release provides the information needed to download from the USGS EarthExplorer portal digital orthophotos acquired during a tracer experiment performed on the Missouri River near Columbia, Missouri, on May 5, 2021. One of the primary goals of this tracer experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) from various types of remotely sensed data in a large, highly turbid natural river channel. Previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, but the Missouri River is much more turbid. As a result, the effect of the dye on the reflectance of the water could be obscured by the effects of suspended...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Columbia,
Missouri,
Missouri River,
Orthophotography,
Remote sensing,
Data consist of flow cytometry files (.FCS) that were generated in the analysis of larval pallid sturgeon specimens. Nuclei from produced larval sturgeon somatic cells were analyzed using flow cytometry to estimate genome size and assign ploidy. Freshly collected rainbow trout (Oncorhynchus mykiss), largemouth bass (Micropterus salmoides), or pallid sturgeon blood were used as external controls, whereby the fish blood samples were analyzed in separate tubes from the cells of prepared sturgeon larvae. All samples at 1 x 10^6 cells/mL were incubated in a propidium iodide solution to stain DNA, then analyzed by flow cytometry. Analysis software generated histograms from the experimental samples and the control standard...
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