Filters: Tags: phylogenetics (X) > partyWithName: Southwest Biological Science Center (X)

Filters Date Range Past year (0) Past month (0) Past week (0) Past day (0) Custom range... To   Search Contacts Robert T Massatti U.S. Geological Survey U.S. Geological Survey - ScienceBase Ecosystems Matthew R Jones Daniel E Winkler Tag Types Theme (2) Place (2) USGS Scientific Topic Keyword (2) Harvest Set (2) Tag Schemes None (1) Geographic Names Information System (GNIS) (2) USGS Thesaurus (2) USGS Biocomplexity Thesaurus (2) ISO 19115 Topic Categories (2) National Agricultural Library Thesaurus (1) View Results as: JSON ATOM CSV

Genetic analyses of Astragalus sect. Humillimi data in the southwest USA These data were compiled to support effective conservation for species within Astragalus sect. Humillimi. Two species, A. cremnophylax var. cremnophylax and A. humillimus are federally listed as endangered taxa. The data provided herein were used to resolve the relationaships among taxa, the population structure within taxa, and genetic diversity within taxa. The data are provided in a STRUCTURE-formatted file that includes taxa, individuals, sampling localities, and the genotype scores per individual for 690 Amplified Fragment Length Polymorphisms (AFLPs). Tags: Arizona, Astragalus sect. Humillimi;, Botany, Colorado Plateau, Ecology, All tags... Fabaceae, Genetics, Grand Canyon National Park, Information Sciences, New Mexico, USGS Science Data Catalog (SDC), biota, conservation genetics, phylogenetics, southwestern United States, Fewer tags Astragalus species complex genetic data from southeast Utah (Grand County and San Juan County), USA These data were compiled to investigate the evolutionary history of Astragalus iselyi, A. sabulosus var. sabulosus, and A. sabulosus var. vehiculus. The data release consists of six text files. One file is a bash script (astragalus_MLE_msms.sh) for generating simulated genetic data. Four files contain individual-level (astragalus.fasta, astragalus.nothin.recode.vcf, astragalus.recode.vcf) or population-level (astragalus_dadi.txt) information on genetic variation. One file contains sampling site-specific data for various soil and climatic variables (astragalus_env.txt). The .vcf files contain the full sequence information that is contained in the other files, but the file structures vary based on the programs used... Tags: Biological phenomena, Botany, Colorado Plateau, DNA sequencing, Ecology, All tags... Evolution (biology), Evolutionary genetics, Genetics, Geography, Grand County, Information Sciences, Intermountain West, San Juan County, USGS Science Data Catalog (SDC), Utah, adaptation, biota, demography, evolution, genetic diversity, genetic diversity, genomics, geography, native species, native species, phylogenetics, phylogeography, population structure, rare species, western United States, Fewer tags