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This dataset contains information from visual encounter surveys conducted between 2012 and 2016 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort in the Oregon Cascade Mountain Range. We surveyed 91 sites using a rotating frame design in the Klamath and Deschutes Basins, Oregon, which encompass most of the species' core extant range. Data consist of spotted frog counts aggregated by date, location, and life stage, as well as data on environmental conditions at the time of each survey.
Categories: Data;
Tags: Aquatic ecology,
Cascade Range,
Deschutes County,
Klamath County,
Lane County,
A plague (Yersinia pestis) epizootic spread through Gunnison's prairie dogs (Cynomys gunnisoni), and possibly other rodent species, in the Moreno Valley in north-central New Mexico between winter 1984-1985 and autumn 1987. We observed the progress of the epizootic and subsequent population recovery at four prairie dog towns within the valley during this period. At two towns (Midlake and Val Verde) the prairie dogs were marked prior to the epizootic. At two additional towns (Vega and South Entrance) prairie dogs were marked following the epizootic. In 1988, a second epizootic occurred at Vega. One hundred thirty-nine serum samples were collected from prairie dogs and other rodents and 1,750 fleas were collected from...
Categories: Publication;
Types: Citation,
Journal Citation;
Tags: Cynomys gunnisoni,
Journal of Wildlife Diseases,
Yersinia pestis,
epizootiology,
fleas,
These data are .csv files of tagged sea otter re-sighting locations (henceforth, resights) collected in the field using a combination of VHF radio telemetry and direct observation using high powered (80x) telescopes. Sea otters were tracked by shore or boat-based observers from the date of tagging until the time of radio battery failure, the animal’s death, or the end of the project, whichever comes first. The frequency of re-sighting was opportunistic, depending on logistical factors such as coastal access, but generally ranged from daily to weekly. Location coordinates are reported latitude and longitude as well as X and Y coordinates in the projection/datum California Teale-Albers NAD 1927. The file contains...
Categories: Data;
Types: Citation;
Tags: California,
Santa Barbara Channel Islands,
Santa Barbara County,
Southern sea otter,
movement patterns,
***This dataset is superseded by Adams, M.J., Pearl, C.A., McCreary, B., Galvan, S.K., and Rowe, J.C., 2019, Oregon Spotted Frog (Rana pretiosa) Monitoring at Jack Creek 2015-2018 (final): U.S. Geological Survey data release, https://doi.org/10.5066/P9L2XC5B.*** This dataset contains information from mark-recapture surveys conducted in 2015 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort at Jack Creek, Klamath County, Oregon. Data consist of spotted frog counts aggregated by date, location, life stage, and sex, as well data on environmental conditions at the time of each survey.
The sea-cliff bedstraw (Galium buxifolium) data set contains two types of information, formatted as CSVs: 1) Spatial coordinates (WGS 84) of known population occurrences on Santa Cruz and San Miguel Islands, California, as of 2006 (sensitive locality information); 2) Demographic data measured at four populations growing on Santa Cruz Island. Three of the populations were measured in 2005 and 2006, the fourth was measured in 2005, 2006, 2008, 2010, 2011, and 2014. These data support the following publication: McEachern, K., Chess, K.A., Flagg, K., and Niessen, K.G., 2019, Sea-cliff bedstraw (Galium buxifolium) patterns and trends, 2005–14, on Santa Cruz and San Miguel Islands, Channel Islands National Park, California:...
All gillnet data represented here expand upon vessel operations (OP table) data, all of which are collected by the United States Geological Survey, Great Lakes Science Center and its partners. The Gillnet Tables contain data collected from the research vessel deploying various gear used for gillnet data collection. The database uses sample_type to indicate the gear deployed. The tables relating to Gillnet are: GN_Annulus.csv, GN_Catch.csv, GN_Effort.csv, GN_Fish.csv, GN_L, GN_LF.csv, GN_OP.csv, GN_Prey.csv, GN_Stomach.csv, LMMB_Fish_Prey.csv, and LMMB_Invert_Prey.csv Data Quality: Note that the following data release is a snapshot of the database at the time of release. Some data quality checks are still being...
Map containing historical census data from 1900 - 2000 throughout the western United States at the county level. Data includes total population, population density, and percent population change by decade for each county. Population data was obtained from the US Census Bureau and joined to 1:2,000,000 scale National Atlas counties shapefile.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Arizona,
California,
Colorado,
Idaho,
Montana,
These data include egg mass counts and adult capture-mark-recapture histories for Foothill Yellow-legged frogs (Rana boylii) at two streams in northern California. Data were collected from the South Fork Eel River and its tributary, Fox Creek, from 1993-2019. Data from Hurdygurdy Creek were collected from 2002-2008.
Data on body condition and reproduction of Utah prairie dogs at 5 colonies on the Awapa Plateau, Utah, USA, June-August 2013-2016. Utah prairie dogs were live-trapped and sampled on 5 colonies. We recorded the age (juvenile/adult) and mass (nearest 5 grams) of each prairie dog and marked its ears and body with metal tags and passive integrated transponders, respectively, for permanent identification. We measured each prairie dog's right hind foot length (nearest millimeter). We indexed each adult prairie dog's body condition as the ratio between its mass and hind-foot length. Prairie dogs were allowed to recover from anesthesia and released at their trapping locations. We indexed prairie dog reproduction, by colony...
Assessing the distribution and abundance of both predator and prey (forage) fish species is a cornerstone of ecosystem-based fishery management, and supports decision making that considers food-web interactions. In support of binational Great Lakes fishery management the objectives of this survey were to: provide estimates of densities of key forage and predator species in the western basin of Lake Erie, to assess seasonal and spatial distributions of fishes in tandem with water quality information, and to assess year class strength. A systematic grid sampling approach with 41 stations was sampled via bottom trawl during June (Spring) and September (Autumn), starting in 2013. This data release adds 2021 data to...
Categories: Data;
Tags: Aquatic Biology,
Biota,
Bottom trawl survey,
Ecology,
Freshwater ecosystems,
Observing and counting bats is extremely difficult. Bats hide during the day, fly in darkness, and most species in the United States (US) become inactive and inaccessible in cryptic hibernation sites for 7-8 months each year. More than 40 different species of bats occur year-round in the US, yet reasonable population estimates exist for very few. Populations of US bats face new and unprecedented threats from white-nose syndrome (WNS) and industrial wind turbines. Like WNS, wind energy development might adversely affect entire populations of bats. Species of bats dying at wind turbines in the greatest numbers rank among the most cryptic, elusive, and poorly understood. Hoary bats (Lasiurus cinereus) compose approximately...
Categories: Data,
Project;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: EARTH SCIENCE > LAND SURFACE > LANDSCAPE,
Hoary bat,
Midwest R3 Science Applications,
Project,
environment,
All mensuration data represented here expand upon vessel operations (OP table) data, all of which are collected by the United States Geological Survey, Great Lakes Science Center and its partners. The Mensuration Tables contain data collected from the research vessel deploying various gear used for mensuration data collection. The database uses sample_type to indicate the gear deployed. The tables relating to Mensuration are: Mensuration.csv, MS_head_rope_depth.csv, MS_FOOT_ROPE_DEPTH, MS_Primary.csv, MS_Temperature.csv, and MS_Wingspread.csv Data Quality: Note that the following data release is a snapshot of the database at the time of release. Some data quality checks are still being undertaken after the time...
Sage-grouse (Centrocercus urophasianus and C. minimus) historically inhabited much of the sagebrush-dominated habitat of North America. Today, sage-grouse populations are declining throughout most of their range. Population dynamics of sage-grouse are marked by strong cyclic behavior. Adult survival is high, but is offset by low juvenile survival, resulting in low productivity. Habitat for sage-grouse varies strongly by life-history stage. Critical habitat components include adequate canopy cover of tall grasses (? 18 cm) and medium height shrubs (40?80 cm) for nesting, abundant forbs and insects for brood rearing, and availability of herbaceous riparian species for late-growing season foraging. Fire ecology of...
Categories: Publication;
Types: Citation,
Journal Citation;
Tags: Rangeland Ecology & Management,
Society for Range Management,
fire ecology,
habitat,
herbicide,
Most models of resource competition assume that coexistence of consumers depends on tradeoffs in their abilities to exploit shared resources along dimensions of environmental heterogeneity generated by factors external to the consumers. However, consumers may create heterogeneity themselves by modifying resources that they do not immediately consume; such ?resource processing? is predicted to allow coexistence if consumers vary in use of resources in primary vs. modified form. To explore whether external food storage (caching) represents a form of resource processing that contributes to observed patterns of species coexistence, we developed a biologically explicit simulation model of competition for a well-studied...
Categories: Publication;
Types: Citation,
Journal Citation;
Tags: Coexistence mechanisms,
Computer model,
Elsevier,
Exploitative competition,
Food storage,
The current study was designed to provide critical information for resource managers (specifically the Bureau of Ocean Energy Management, henceforth BOEM, and the U.S. Fish and Wildlife Service, henceforth USFWS) about the spatial ecology, population status, and potential population threats to sea otters in Santa Barbara Channel, with particular reference to exposure to manmade structures and sources of oil and natural gas. Our four primary research objectives were: 1. Determine the extent of movements and spatial use patterns by sea otters along the southern California coast 2. Identify important sea otter resting and foraging areas adjacent to manmade structures 3. Assess sea otter distribution, behavior and...
We characterized, at millimeter resolution, bacterial biomass, diversity, and vertical stratification of biological soil crusts in arid lands from the Colorado Plateau. Microscopic counts, extractable DNA, and plate counts of viable aerobic copiotrophs (VAC) revealed that the top centimeter of crusted soils contained atypically large bacterial populations, tenfold larger than those in uncrusted, deeper soils. The plate counts were not always consistent with more direct estimates of microbial biomass. Bacterial populations peaked at the immediate subsurface (1-2 mm) in light-appearing, young crusts, and at the surface (0-1 mm) in well-developed, dark crusts, which corresponds to the location of cyanobacterial populations....
Categories: Publication;
Types: Citation,
Journal Citation;
Tags: DNA,
Microbial Ecology,
RNA,
bacteria,
biomass,
These data were compiled to fit an integrated population model of brown trout in the Glen Canyon Reach of the Colorado River and test different hypotheses regarding the driver of brown trout population dynamics. Also, data were compiled as inputs for a model to simulate population dynamics and species interactions among brown trout, rainbow trout and humpback chub in the Colorado River between Glen Canyon Dam and the confluence of the Colorado River and the Little Colorado River.
This dataset contains information from mark-recapture and egg mass surveys conducted 2015-2018 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort at Jack Creek, Klamath County, Oregon. Data consist of spotted frog counts (handled by surveyors) aggregated by date, location, life stage, and sex, as well as data on environmental conditions at the time each survey. Note that due to updates in access permissions, surveyed area within each site varies over time. Thus, counts are not comparable among year, as surveyed area was not held constant.
A study comparing reintroduction scenarios for the San Francisco gartersnake (Thamnophis sirtalis tetrataenia), an endangered subspecies native to San Mateo County and Santa Cruz County in northern California. Models for snake survival, growth, fecundity, and reproductive status were used to construct a demographic population model. Data are posterior distributions for demographic parameters from Markov Chain Monte Carlo sampling in hierarchical Bayesian models. These data support the following publication: Rose, J.P., Kim, R., Schoening, E.J., Lien, P.C., and Halstead, B.J., 2023. Comparing reintroduction strategies for the endangered San Francisco gartersnake (Thamnophis sirtalis tetrataenia) using demographic...
Categories: Data;
Tags: California,
San Mateo County,
USGS Science Data Catalog (SDC),
Wildlife Biology,
biota,
In Texas, the USFWS is currently reviewing 11 mussel species for ESA protection and several of these species (e.g., Cyclonaias petrina, Texas Pimpleback, and Lampsilis bracteata, Texas Fatmucket) have been the primary focus of controlled propagation by several federal hatcheries. To date, information on genetic diversity within and across known populations for these species is incomplete and so the justification for their controlled propagation is unclear, and a genetic management plan to guide propagation activities does not exist. These unknowns raise serious questions about whether any of the 11 proposed species are truly in need of and would benefit from controlled propagation. The overall goal of this project...
Categories: Data,
Project;
Tags: ANIMALS/INVERTEBRATES,
BIOLOGICAL CLASSIFICATION,
BIOSPHERE,
BIVALVES,
EARTH SCIENCE,
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