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A total of 27 temperature sensors were deployed along the lower 90 miles of the Yakima River at 7 locations where cold water had been previously observed. These 7 cold-water areas had 3 to 6 temperature sensors installed to document the extent and duration of these cold-water areas and their impacts on mainstem temperatures of the Lower Yakima River. Cold-water areas included the mouths of tributaries, alongside channels, and within alcoves. Sensor deployments ranged from 1 to 2 years beginning in October 2018. All temperature data are included in the Yakima.temperatures.zip folder. Details of each monitoring location are provided in the site.locs.csv file. In addition to the raw data and site location information,...
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These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type.
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To support an investigation of the effectiveness of a large-scale river restoration project, several types of field data were collected from two gravel-bed reaches of the regulated lower Merced River in California's Central Valley, primarily in the fall of 2016. These data sets were intended to characterize salmon spawning habitat and identify factors influencing spawning site selection. This parent data release includes links to child pages for the following data sets: 1) Bulk samples of streambed sediment used to characterize the subsurface grain size distribution. 2) Pebble counts used to characterize the sediment grain size distribution of the bed surface. 3) Force gage measurements used to parameterize a...
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This dataset consists of data collected at Badlands National Park (Interior, SD) that were used in the analysis in support of the article titled "Conserving all the pollinators: Variation in probability of pollen transport among insect taxa," which has been submitted to "Natural Areas Journal." Data collected between May-October, 2010 and 2011, and June-July 2012 included insects found in contact with floral reproductive parts of focal plant species, or plant species within a 1 ha plot surrounding focal plant, and pollen species removed from the collected insects' bodies. Focal plant species included Astragalus barrii (May-June 2010-11), Eriogonum visheri (July-August, 2010-11), Chrysothamnus parryi (September-October...
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This database is the result of an extensive literature search aimed at identifying documents relevant to the emerging field of dam removal science. In total the database contains 296 citations that contain empirical monitoring information associated with 207 different dam removals across the United States and abroad. Data includes publications through 2020 and supplemented with the U.S. Army Corps of Engineers National Inventory of Dams database, U.S. Geological Survey National Water Information System and aerial photos to estimate locations when coordinates were not provided. Publications were located using the Web of Science, Google Scholar, and Clearinghouse for Dam Removal Information.
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Several Francisella spp. including F. noatunensis are regarded as important emerging pathogens of wild and farmed fish. However, very few studies have investigated the virulence factors that allow these bacterial species to be pathogenic in fish. The Francisella Pathogenicity Island (FPI) is a well-described, gene-dense region encoding major virulence factors for the genus Francisella. PdpA is a member of the pathogenicity determining protein genes encoded by the FPI that are implicated in the ability of the mammalian pathogen, F. tularensis, to escape and replicate in infected host cells. Using a sacB suicide approach, we generated pdpA knockouts to address the role of PdpA as a virulence factor for F. noatunensis....
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This dataset consists of raster geotiff outputs of relative environmental favorability for coral growth and survival in the United States territories of Guam and American Samoa across 3 climate scenarios: Present, Intermediate Emissions (Representative Concentration Pathway 4.5), and Worst Case Emissions (Representative Concentration Pathway 4.5). These datasets were generated from a synthesis of spatial variability in many environmental conditions, including thermal stress, wave power, irradiance, chlorophyll concentrations, macroalgal cover, calcite concentrations, turbidity, and erosion. Input conditions were classified as “Managed” or “Non-managed” based on whether the condition could be managed at the island...
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The U.S. Geological Survey provides a wide range of scientific information to an even wider group of stakeholders. Understanding what capacities are needed and if and or where these capacities exist across the USGS landscape is critical in moving science to the next level of use, implementation, and visualization. The concept behind the groups organized to conduct and interpret the survey that collected these data took advantage of the USGS’s position as a science organization with expertise spanning a wide range of science disciplines, stakeholders, and responsibilities. A survey was conducted of USGS employees (Sep 20-Nov 20) to get a current sample of the capacities that exist across the USGS.
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Note: this dataset has been superseded by this new data product: Simpson, A., Turner, R., Blake, R., Liebhold, A., and Dorado, M., 2021, United States Register of Introduced and Invasive Species: U.S. Geological Survey data release, https://doi.org/10.5066/P95XL09Q. Invasive species are a subset of non-native (or nonindigenous) species, and knowing what species are non-native to a region is a first step to managing invasive species. This is the second update to the dataset "First comprehensive list of non-native species established in three major regions of the United States" supporting a USGS Open File Report by the same name published on 2018-10-17. Version 3.0 of the non-native species list, as of 2020-09-15,...
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In Hawai‘i and other oceanic islands with few native land mammals, black rats (Rattus rattus) are among the most damaging invasive vertebrate species to native forest bird populations and habitats, due to their arboreal behavior and generalist foraging habitats and habitat use. We evaluated the nesting response of Hawai‘i ‘Elepaio (Chasiempis sandwichensis; Monarchidae), a generalist insectivore, to the removal of black rats using rodenticide in a before-after-control-impact study in high and low, mesic montane habitat recovering from long-term damage from introduced ungulates and weeds. We monitored nesting and rat activity during 2015–2016 before applying diphacinone bait in 2017 to remove rats from two 700 x...
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The avian community of peatland habitats were surveyed along belt transects established in multiple units of Seney National Wildlife Refuge, representing peatland habitats dominated by a range of sedge to shrub cover at varying levels. Surveys were conducted during the 3-week period of mid-May to early June and again during mid-June-early July in three years (2007–2009). Three datasets are included here 1) data of presence/absence of breeding bird species detected in each 100-m segment of belt transects, 2) four-letter codes for bird species, and 3) environmental and land-cover attributes summarized for 200-m buffers around the bird-survey segments (100m x 100m), and number of years since each segment was burned,...
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Migratory species often provide ecosystem service benefits to people in one country while receiving habitat support in other countries. The multinational cooperation necessary to ensure continued provisioning of these benefits by migrational processes may be informed by understanding the benefits that people in different countries derive from migratory wildlife. We conducted stated preferences surveys to estimate the willingness of respondents from Canada, the U.S., and México to invest in conservation for two migratory species, the northern pintail duck (Anas acuta) and the Mexican free-tailed bat (Tadarida brasiliensis mexicana). These data include characteristics of were conservation payments might occur, of...
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Remote camera stations were set up in Crater Lake National Park from June to October 2016 to document occurrence of mesocarnivores and other wildlife. 124 cameras were set up at 31 primary sampling units (clusters of 4 cameras) throughout the park. Random locations for primary sampling units were chosen using a 3-km sampling grid over the park area. The dataset contains all species observed within the study time-frame, the date and time of observation and the number of individuals detected as well as identification for individual locations, cameras and images. Of the three target species of conservation concern (Pacific fisher (Pekania pennanti), Pacific marten (Martes caurina), Sierra Nevada red fox (Vulpes vulpes...
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The broadly shared information needs for grassland managers in the North Central region to meet conservation goals in a changing climate are presented and ranked as highly relevant, somewhat relevant, or not relevant for federal, state, tribal, and non-governmental grassland-managing entities.
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Woody encroachment and its effects on biodiversity in fens and grasslands has become an increasing concern in the conservation and management of plant communities. These data were collected to examine the effects of spring and summer prescribed burns on the plant community, cover, and structure in open and partially wooded fens at Seney National Wildlife Refuge, Michigan, using a before-after-control-impact design. Paired, 1-ha blocks were established in two fen areas, C3 and Marsh Creek, and data collected for two years before burning (2006-07) and three years after burning (2008-10). Treatments were C3 control, C3 spring burn (May 2008), Marsh Creek control, and Marsh Creek summer burn (July 2008); data were also...
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Stabilizing the eastern, migratory population of monarch butterflies (Danaus plexippus) is expected to require substantial habitat restoration on agricultural land in the core breeding area of the Upper Midwestern U.S. Previous research has considered the potential to utilize marginal land for this purpose because of its low productivity, erodible soils, and high nutrient input requirements. This strategy has strong potential for restoring milkweed (Asclepias spp.), but may be limited in terms of its ability to generate additional biophysical and socioeconomic benefits for local communities. Here we explore the possibility of restoring milkweed via the creation of continuous riparian buffer strips around perennial...
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This is the data archive for the publication Ungulate Migrations of the Western United States, Volume 4 and includes the collection of GIS map files that are mapped and described in the report. These map files are meant to provide a common spatial representation of the mapped migrations and seasonal ranges. This data release provides the means for ungulate migrations to be mapped and planned for across a wide variety of landscapes where they occur. Due to data sharing constraints of participating agencies, not all the files that underlie the mapped migrations included in the report have been released. Data in this archive can be downloaded two ways. To download by individual herd/range, clicking on child item pages...
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(THIS VERSION HAS BEEN SUPERSEDED by US-RIIS V2.0, November 2022, available at https://doi.org/10.5066/P9KFFTOD) Introduced (non-native) species that becomes established may eventually become invasive, so tracking introduced species provides a baseline for effective modeling of species trends and interactions, geospatially and temporally. The United States Register of Introduced and Invasive Species (US-RIIS) is comprised of three lists, one each for Alaska (AK, with 532 records), Hawaii (HI, with 6,075 records), and the conterminous United States (L48, with 8,657 records). Each list includes introduced (non-native), established (reproducing) taxa that: are, or may become, invasive (harmful) in the locality; are...
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These data were used for preparation of Sargeant et al. (2021), "Spatial network clustering reveals elk population structure and local variation in the prevalence of chronic wasting disease." They include locations of elk that were monitored with global positioning system collars at Wind Cave National Park, South Dakota (WICA) during 2005--08 and 2011--13; coordinates of a polygon describing the boundary of WICA; and results of tests for chronic wasting disease for elk culled at WICA during 2016--18.


map background search result map search result map USGS Dam Removal Science Database v4.0 Effects of fire on vegetation in fens at Seney National Wildlife Refuge Variation in pollen transport, Badlands NP, 2018 Hawaii Volcanoes National Park Elepaio nest monitoring and black rat mark recapture data 2015-2017 A comprehensive list of non-native species established in three major regions of the United States: Version 3.0 Field measurements for characterizing salmon spawning habitat in two restored reaches of the lower Merced River, California Mesocarnivore Survey of Crater Lake National Park, Klamath Network, 2016 Breeding bird species in peatland habitats, Seney NWR, 2007-2009 Data release for Monarch Habitat as a Component of Multifunctional Landscape Restoration Using Continuous Riparian Buffers Supporting data: Spatial network clustering reveals elk population structure and local variation in prevalence of chronic wasting disease at Wind Cave National Park, 2005--18 Spatial variation in population dynamics of Northern Great Plains piping plovers, 2014–2019 Disruption of Francisella noatunensis orientalis pdpA gene results in virulence attenuation and protection in zebrafish USGS Earthmap Capacity Assessment Dataset Temperature data collected from the Lower Yakima River from October 2018 to October 2020 Favorability of environmental conditions for coral reefs in Guam and American Samoa under multiple climate scenarios Multi-species, multi-country analysis reveals North Americans are willing to pay for transborder migratory species conservation, data Broadly Shared Information Needs Among Grassland Managers in the North Central Region United States Register of Introduced and Invasive Species (US-RIIS) Ungulate Migrations of the Western United States, Volume 4 Captures and Trapping Effort for Deer Mice (Peromyscus sonoriensis) at Point Reyes National Seashore, California, USA from 2021 to 2022 Hawaii Volcanoes National Park Elepaio nest monitoring and black rat mark recapture data 2015-2017 Field measurements for characterizing salmon spawning habitat in two restored reaches of the lower Merced River, California Supporting data: Spatial network clustering reveals elk population structure and local variation in prevalence of chronic wasting disease at Wind Cave National Park, 2005--18 Mesocarnivore Survey of Crater Lake National Park, Klamath Network, 2016 Captures and Trapping Effort for Deer Mice (Peromyscus sonoriensis) at Point Reyes National Seashore, California, USA from 2021 to 2022 Effects of fire on vegetation in fens at Seney National Wildlife Refuge Breeding bird species in peatland habitats, Seney NWR, 2007-2009 Spatial variation in population dynamics of Northern Great Plains piping plovers, 2014–2019 Data release for Monarch Habitat as a Component of Multifunctional Landscape Restoration Using Continuous Riparian Buffers Broadly Shared Information Needs Among Grassland Managers in the North Central Region Ungulate Migrations of the Western United States, Volume 4 USGS Dam Removal Science Database v4.0 United States Register of Introduced and Invasive Species (US-RIIS) A comprehensive list of non-native species established in three major regions of the United States: Version 3.0 Favorability of environmental conditions for coral reefs in Guam and American Samoa under multiple climate scenarios Multi-species, multi-country analysis reveals North Americans are willing to pay for transborder migratory species conservation, data USGS Earthmap Capacity Assessment Dataset