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This data release includes three types of data used in habitat modeling, and predictions from the habitat models. (1) Predictor rasters for proportion urban development within 1-km radius, proportion exurban within 1-km radius, vector ruggedness measure (VRM) within 500-m radius, topographic position index (TPI) within 500-m radius. (2) Twenty-nine null models for space use for 29 different golden eagles. (3) Twenty-nine response variable rasters of eagle locations per cell for 29 golden eagles. (4) A raster for predicted population-level probability of habitat selection and contours for predicted population-level probability of habitat selection and contours. These data support the following publication: Tracey,...
The midcontinent population of sandhill cranes (Antigone canadensis) has historically been classified into three putative subspecies, but genetic analyses have identified only two genetically distinct subspecies. Previous studies have successfully used morphometrics in combination with an individual’s sex to differentiate subspecies of sandhill cranes that had been inferred based on breeding area, but no study has used a sample of genetically determined subspecies to discriminate and develop predictive models. These data were used to support an effort to develop a field-ready tool using common morphometric measurements without determination of an individual’s sex and linear discriminant analysis to classify genetically...
Categories: Data;
Tags: Arizona,
Nebraska,
New Mexico,
Saskatchewan,
USGS Science Data Catalog (SDC),
Zoonotic diseases are of considerable concern to the human population and viruses such as avian influenza (AIV) threaten food security, wildlife conservation and human health. Wild waterfowl and the natural wetlands they use, are known AIV reservoirs, with birds capable of virus transmission to domestic poultry populations. While infection risk models have linked migration routes and AIV outbreaks, there is a limited understanding of wild waterfowl presence on commercial livestock facilities, and movement patterns linked to natural wetlands. In this dataset, records (rows) represent all analyzed locations of individual waterfowl relative to locations of commercial livestock facilities and habitats. Each row has...
Categories: Data;
Tags: California,
Grizzly Bay,
Grizzly Island,
Suisun Bay,
USGS Science Data Catalog (SDC),
Through the North American Bat Monitoring Program, Bat Conservation International and U.S. Geological Survey (USGS) collaborated with the U.S. Fish and Wildlife Service to provided technical and science support to assistance in U.S. Fish and Wildlife Services’ Species Status Assessment (“SSA”) for the northern long-eared bat (Myotis septentrionalis), little brown bat (Myotis lucifugus), and tri-colored bat (Perimyotis subflavus). We conducted analyses to estimate changes in bat echolocation activity recorded during mobile transect surveys. Bat activity recorded during mobile acoustic transects provide an index of abundance and can be used to determine changes in populations over time (Roche et al. 2011, Jones et...
These data represent occupancy estimates for western bumble bee across the western continental United States and the spatial variation in detection probabilities that occur during bumble bee surveys. This product contains five raster layers (appearing as separate bands in a multi-band raster). The first two bands represent the predicted occupancy of western bumble bee in 1998 and 2018. We modeled western bumble bee occupancy as a function of: latitude, longitude, elevation, year, and land cover. The last three bands represent the spatial variation in detection probabilities predicted to occur for surveys conducted across the western United States on three dates (May 15, July 15, and September 15). We modeled detection...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Arizona,
Bombus occidentalis,
California,
Colorado,
Detection Probability,
The grizzly bear distribution boundary represents the estimated geographic extent of occupied range of the Yellowstone grizzly bear population for the period 2006-2020. The distribution boundary was delineated to provide reliable estimations of grizzly bear occupancy throughout time and for use as a monitoring tool in grizzly bear management and conservation.The boundary was delineated by the Interagency Grizzly Bear Study Team (IGBST) using an interpolation method based on grizzly bear VHF telemetry and GPS locations as well as verified observations and signs of grizzly bears inside the Greater Yellowstone Ecosystem during 2006 to 2020.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Beaverhead-Deerlodge,
Bridger-Teton,
Caribou-Targhee,
Custer-Gallatin,
Ecology,
This data set includes environmental and biological information on fishes collected using gill nets and otter trawls during day and night, as well as diet data for Striped bass and Sacramento pikeminnow obtained via gastric lavage. Sampling took place in and around Ryer Island, Suisun Bay, California during Winter and Spring of 2018.
This product consists of multiple tabular datasets and associated metadata for clinical status, gene transcripts, and lab results related to presence of Mycoplasma spp. in desert reptiles. To better understand immune responses to pathogenic infections, we conducted an experiment to quantify innate and induced immune responses using gene transcript profiles and measured induced antibody levels for Mycoplasma spp. in Mojave Desert tortoises (Gopherus agassizii). Data consists of: ​ - Clinical Status Data - Clinical status of presence or absence of nasal discharge, eroded nares, or labored respiration in 15 captive tortoises classified as naive, exposed, or infected. - Gene Transcript Data - Gene transcription values...
Here we provide public access to UCE DNA sequences for all genetic samples in Byerly et al. 2022.
In the fall of 2005, dead and dying great blue herons (Ardea herodias) exhibiting emaciation, lethargy, inability to fly and a hard abdomen (steatitis confirmed at necropsy) were observed at Poplar Island and nearby Coaches Island (Rattner et al. 2006). Birds were hand captured at or near impoundments (cells) and ponds that contained large algal blooms, and because of poor prognosis were euthanized. Seemingly healthy great blue herons were subsequently collected at Blackwater National Wildlife Refuge. Blood and fecal samples were collected, and submitted to Antech Diagnostics (Lake Success, New York) for Avian/Exotic Combined Blood Count, Comprehensive Avian Chemistries, Fecal Cultures and Vitamin E analysis. Liver...
Categories: Data;
Tags: Blackwater National Wildlife Refuge,
Blood Chemistry,
Environmental Health,
Fecal Analysis,
Great Blue Herons,
Expanding human enterprise across remote environments impacts many wildlife species, including sage-grouse (Centrocercus urophasianus), an indicator species whose decline is at the center of national conservation strategies and land use policies. Anthropogenic resources provide subsidies for generalist predators, potentially leading to cascading effects on sensitive prey species at lower trophic levels. In semi-arid western ecosystems, common ravens (Corvus corax) are expanding in distribution and abundance, and may be negatively affecting sage-grouse reproductive success at broad spatial scales. Ravens are a common predator of sage-grouse nests, and potentially prey on chicks as well. This research aimed to address...
Categories: Data;
Tags: Great Basin,
USGS Science Data Catalog (SDC),
Wildlife Biology,
biota,
geographic information systems (GIS),
In 2016, smallmouth bass were collected from three sites in the Lake Erie drainage in Erie County, Pennsylvania and an out-of-basin site in the Allegheny River drainage in order to assess reproductive health and identify endocrine disruption responses. Pieces of liver and gonad were taken in Z-Fix and RNALater for histology and transcript abundance analysis. A landscape analysis was conducted for the immediate and upstream catchments with 2016 land cover data. Correlations between biological variables and transcripts were made in addition to differences between sites. The results showed that males had biological variables that correlated with transcripts associated with endocrine disruption and a high rate of testicular...
Categories: Data;
Tags: Aquatic Biology,
Environmental Health,
Environmental Health,
Lake Erie,
USGS Science Data Catalog (SDC),
These data represent key phenology trends across the western United States from 1982-2016. Using two remote sensing datasets, CMGLSP and VIPPHEN-EVI2, trends were calculated for four phenology variables: Start of Season (SOS), Peak Instantaneous Rate of Green-Up Date (PIRGd), Peak of Season (POS), and End of Season (EOS). The Theil-Sen slope and standard deviation were applied to the phenology metrics to evaluate how phenology dates and variation in those dates have changed through time. The Mann-Kendall test was also applied to give an indication of trend significance. Lastly, we include the mean and standard deviation of each metric across the time period.
Microsatellite genotypes for American black bears collected by Gould et al. 2002 and used to assess the genetic structure of American black bear populations in the American Southwest and northern Mexico. Genotypes are for Ursus americanus individuals.
Categories: Data;
Tags: American Southwest,
American black bear,
Arizona,
Coahuila de Zaragoza,
Colorado,
Environmental DNA (eDNA) water samples were collected at 15 tree islands containing wading bird breeding colonies (order Pelecaniformes) and 15 empty control islands in the central Everglades of Florida in spring of 2017 (April through June) and analyzed for the presence of eDNA from invasive Burmese pythons (Python bivittatus). The Burmese python is now established as a breeding population throughout south Florida, USA. Pythons can consume large quantities of prey and may be a particular threat to wading bird breeding colonies in the Everglades. To quantify python occupancy rates at tree islands where wading birds breed, we utilized environmental DNA (eDNA) analysis—a genetic tool which detects shed DNA in water...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Aquatic Biology,
Broward,
Everglades,
Genetics,
Miami-Dade,
The videos of ant (Crematogaster sp.) predation on giant applesnail (Pomacea maculata) egg masses were taken on September 24 of 2018 at the Hudson Woods Unit of the Texas Mid-Coast National Wildlife Refuge Complex (29°09’52” N, 95°30’5” W). Jennifer Wilson (US Fish and Wildlife Service) took the videos using a smart phone.
This dataset contains information on the Bullseye Snakehead fish found only in southeastern Florida. It is a subset of a larger database, the Nonindigenous Aquatic Species Database (NAS). This information resource is an established central repository for spatially referenced biogeographic accounts of introduced aquatic species. The NAS website provides scientific reports, online/real-time queries, spatial data sets, distribution maps, fact sheets, and general information.
To document current Mississippi barrier island conditions, imagery was acquired February 28, 2020 using Airborne GPs and field control ground markers. For ground control, markers were established and surveyed in using Real Time Kinematic (RTK) survey equipment. The imagery collected will be processed to produce a mosaic of all 4 islands (Cat, East and West Ship, Horn and Petit Bois) and interpreted to classify wetland marshes. The classified data will not only quantify how much marsh is being affected, but the data will also provide a spatial aspect as to where these degrading marsh fragmentations are occurring. The data will be correlated with other data such as salinity, prescribed burns, flooding frequency and...
These data represent 1) Telemetry from Florida manatee from Crystal River, FL 2006-2018 2) Observations of manatees, swimmers and paddlecraft from Three Sisters Springs, Crystal River, FL 2014-2017 3) GIS polygons of aquatic landscape features from Crystal River, FL.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Aquatic Biology,
Ecology,
Florida,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Laboratory analysis of innate American kestrel, Falco sparverius, immune response after exposure to flame retardant, isopropylphenyl phosphate (ITP) through 21 days post hatch. Data consist of flow cytometry files that were generated in the analysis of white blood cells from kestrel blood. Thus, data are in standard format that allows files created by one type of acquisition hardware and software to be analyzed by any other type.
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