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Data includes results collected in the Mohave Desert during 2016 using three survey methods (acoustic recording units, camera traps, and call-count surveys) to detect gamebirds, primarily Gambel's quail (Callipepla gambelii) but also including records of mourning dove (Zenaida macroura), Eurasian collared-dove (Streptopelia decaocto), and chukar (Alectoris chukar). ARU data includes the Selections (portions of the recording identified as potentially containing a Gambel's quail call) and Detections (quail calls confirmed following audible and visual verification of the recording and spectrogram). ARU data provided is summarized into hourly segments where selections occurred among five study sites. Camera trap data...
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Image and biometric data were collected for 22 species of fish from Great Lakes Tributaries in Michigan and Ohio, and the Illinois River for the purpose of developing a fish identification classifier. Data consists of a comma delimited spreadsheet that identifies image file names and associated fish identification number, common name, species code, family name, genus, and species, date collected, river from which each fish was collected, location of sampling, fish fork length in millimeters, girth in millimeters, weight in kilograms, and personnel involved with image collection. Biometric data are saved as .csv comma delimited format and image files are saved as .png file type.
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The Large River Monitoring Forum compiled fish assemblage data for five large rivers in the U.S. as a part of a coordinated effort to compare and contract river monitoring efforts in large river systems. Fish community data from five monitoring programs were integrated to create the standardized dataset. Authors: Timothy D. Counihan1, Ian R. Waite2, Andy Casper3, David Ward4, Jennifer Sauer5, Elise Irwin6, Colin Chapman7, Brian Ickes5, Craig Paukert8, John Kosovich9, and Jennifer M. Bayer10 1- United States Geological Survey, Western Fisheries Research Center, Columbia River Research Laboratory, 5501A Cook-Underwood Road, Cook, WA 98605; email:tcounihan@usgs.gov; Phone:509-538-2299; Fax:509-538-2843 2- United States...
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This dataset is comprised of six files related to waterbird surveys and resulting Index of Waterbird Community Integrity (IWCI) scores in 21 subestuaries of the Chesapeake Bay from 2010-2014. Two .csv files (1 data file: Prosser et al 2017_IWCI Results MS_Bird Survey Raw Data.csv, 1 definitions file: Prosser et al 2017_IWCI Results MS_Bird Survey Raw Data_Definitions.csv) contain data related to raw waterbird survey data from two seasons (summer and fall). Two .csv files (1 data file: Prosser et al 2017_IWCI Results MS_Species List.csv, 1 definitions file: Prosser et al 2017_IWCI Results MS_Species List_Definitions.csv) contain data related to 60+ Chesapeake waterbird species observed in surveys and their species...
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This dataset is comprised of 3 .csv files related to the use of unmanned aerial systems over waterbird colonies. Specifically, data detail the disturbance observed in birds during flights, the time required for traditional ground surveys to be conducted, and the distance at which birds flush during traditional ground surveys.
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This dataset describes the location of channel heads survyed in two headwater watersheds in Clarksburg, Montgomery County, Maryland, and the digital elevation models derived from light detection and ranging (lidar) covering the two watersheds. The digital elevation models were used to derive topographic attributes used to delineate drainage networks that were then assessed for accuracy using the field-surveyed channel heads. First posted - January 21, 2021 (available from author) Revised - October 15, 2021 (version 2.0)
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These data provide information regarding beryllium-7 radioisotope activity, bulk density, and percent organic matter for wetland soils in the immediate outfall region of an operational Mississippi River diversion. From them, information relating to short-term mineral sediment mass accumulation rates and sediment retention rates in the receiving basin can be inferred.
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Provided are data containing condition assessments on individual giant sequoia (Sequoiadendron giganteum; SEGI) stems and post-fire regeneration counts within Board Camp, Suwanee, New Oriole Lake, Homer’s Nose, and a subset of Redwood Mountain and Dillonwood groves of Sequoia and Kings Canyon national parks, respectively. Stem data contain condition-related attributes (e.g., spatial location, diameter breast height, status - live or dead, percent canopy that is live, scorched or torched). Regeneration plots are located using a spatially-balanced sampling design (Generalized Random Tessellation Stratified - 'GRTS'). Each regeneration plot is a fixed radius circle (11.35 meters or 17.84 meters) and contain count data...
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Using data from 288 adult and yearling female elk that were captured on 22 winter supplemental elk feedgrounds in Wyoming and monitored with GPS collars from 2007 - 2015, we fit Step Selection Functions (SSFs) during the spring abortion season and then implemented a master equation approach to translate SSFs into predictions of daily elk distribution for five plausible winter weather scenarios (from a heavy snow, to an extreme winter drought year). We predicted elk abortion events by combining elk distributions with empirical estimates of daily abortion rates, spatially varying elk seroprevalence, and elk population counts. Here we provide 1) the adult and yearling female elk GPS collar data used to fit SSFs, 2)...
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This dataset is part of the U.S. Geological Survey (USGS) Great Lakes Coastal Wetland Restoration Assessment (GLCWRA) initiative. These data represent the location of dikes within the Upper Peninsula Restoration Assessment (UPRA) study area. An ArcGIS model (Python script) identified dikes as having a difference in elevation above a certain threshold. If the elevation difference was below a certain threshold, the area was not considered a dike. However, if the difference in elevation between two points was significantly high, then the area was marked as a dike. Areas continuous with each other were considered part of the same dike. Data underwent quality control (QC) procedures by having Subject Matter Experts and...
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Summary of Bering and Chukchi Seas seabird necropsies, 2017-2021. More than 14,000 dead seabirds were reported and a total of 117 carcasses were examined. 92 cases had emaciation identified as the Cause Of Death (COD), seven cases where COD was undetermined, and 17 cases where COD was determined as "Other", which included predation, trauma, encephalitis, peritonitis, and bacterial infection. Low Pathogenic Avian Influenza (n=4) and saxitoxin (n=15) were also detected; however, the virus and biotoxin were not determined to be the COD except for one case in 2020 where saxitoxin toxicosis was suspected.
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This dataset consists of raster geotiff outputs from modeling habitat change, marsh vertical accretion, and carbon accumulation in the Nisqually River Delta, Washington, USA. These rasters represent projections of future habitat type, change in surface elevation above Mean Sea Level, and total sediment carbon accumulation since 2011 in coastal wetland habitats. Projections were generated in 20-year increments for 100 years for five amounts of sea-level rise, three amounts of suspended sediment concentrations, and two alternative configurations of the U.S. Interstate-5 causeway as it crosses the Nisqually River to either prevent or allow inland habitat migration (a total of 30 scenarios). The full methods and results...
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Invasive silver carp (Hypophthalmichthys molitrix) occur in large regions of the Mississippi River drainage, outcompete native species, and are notorious for their prolific jumping behavior. Juvenile and adult (up to 25 kg) carp are known to jump up to 3 m above the water surface in response to moving watercraft. Broadband sound recorded from an outboard motor (100 hp at 32 km/hr) can modulate their behavior in captivity; however, the response of wild silver carp to broadband sound has yet to be determined. This data set includes information regarding the sound produced by outboard motor and speakers in the field and will help in determining effectiveness of the usage of control techniques in the management of carps.
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Management actions intended to increase growth and survival of pallid sturgeon (Scaphirhynchus albus) age-0 larvae on the Lower Missouri River require a comprehensive understanding of the geomorphic habitat template of the river. The datasets described here are intended to support decisions relating to where channel-reconfiguration projects should be located to optimize effectiveness of interception rearing complexes (IRCs). The bend-scale geomorphic classification of the Lower Missouri River is intended to help in the design of monitoring and evaluation of IRC projects. The bend-scale classification was based on geomorphic and engineering variables for 257 bends from Sioux City, Iowa to the confluence with the...
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This child data release includes field spectra and in situ measurements of turbidity and Rhodamine WT dye concentration acquired during an experiment performed at the USGS Columbia Environmental Research Center, near Columbia, Missouri, on April 2, 2019. The purpose of the experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) tracer from various types of remotely sensed data in water with varying levels of turbidity. Whereas previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, the Missouri River is much more turbid and the reflectance signal associated with the sediment-laden water could obscure that related to the...
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This data release includes field spectra, UAS-based hyperspectral and RGB images, and in situ measurements of turbidity and Rhodamine WT dye concentration acquired during an experiment performed at the USGS Columbia Environmental Research Center, near Columbia, Missouri, on April 2, 2019. The purpose of the experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) tracer from various types of remotely sensed data in water with varying levels of turbidity. Whereas previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, the Missouri River is much more turbid and the reflectance signal associated with the sediment-laden water...
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Suspended particles are an essential component of large rivers influencing channel geomorphology, biogeochemical cycling of nutrients, and food web resources. The Upper Mississippi River (UMR) is a large floodplain river that exhibits pronounced spatiotemporal variation in environmental conditions and biota, providing an ideal environment for investigating dynamics of suspended particles in large river ecosystems. Here we investigated two questions: (1) How do suspended particle characteristics (e.g., size and morphology) vary temporally and spatially? and (2) What environmental variables have the strongest association with particle characteristics? Water sampling was conducted in June, August, and September of...
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To help determine when winter conditions were changing to spring conditions annually in our four study areas, we determined the first eight-day interval (in accordance with the scale limitations of satellite data we used to assess the presence of snow) during which the first amphibian of the season called at each of our study wetlands in those areas. To do this, we examined contour plots of summaries of all the acoustic data we collected at that site in a given year to identify the unique call signatures of individual amphibian species by date and time. When necessary due to potential confounding on a contour plot, we also examined relevant individual five-minute recordings aurally and visually to confirm whether...
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The sampling locations provided here were selected as a two-stage Generalized Random Tessellation Stratified (GRTS) sample (Stevens & Olsen 2004). The first stage of the GRTS draw used a master sample developed by the North American Bat Monitoring Program (Loeb et al. 2015) from a 10 x 10 km grid placed over the conterminous U.S., Canada, and Mexico. Each 10 x 10 km grid cell (hereafter, master cell) was assigned a GRTS rank by NABat. The rank represents the priority order in which master cells should ideally be sampled. For the second stage of the draw, sampling points within a master cell were selected. Each point was defined as a 30 x 30 m cell of the GIS raster that defined monarch-relevant habitat. Sampling...
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Breeding common loons for the movement and foraging pattern study were obtained from lakes in central and northern Minnesota and Wisconsin, and the Upper Peninsula of Michigan during summers 2010-2012. Both adults of a territorial pair were fitted with archival geolocator tags (Model LAT 2500; 34.6 x 8.3 mm, 4.4 g; Lotek Wireless Inc.). A combination of adhesive and plastic cable ties were used to affix the geolocator tag to a modified lock-on aluminum leg band. Tags were programmed to collect daily location estimates for up to two years, tag temperature (0.02o C accuracy, ≤ 0.05o C resolution) at 30-min intervals, and pressure data (±1% accuracy, 0.05% resolution) at 20-sec intervals during daylight hours to document...


map background search result map search result map Large River Monitoring Forum Fish Assemblage Database 2016 Elk movement and predicted number of brucellosis-induced abortion events in the southern Greater Yellowstone Ecosystem (1993-2015) Effects of local shoreline and subestuary watershed condition on waterbird use influences of geography scale and season in the Chesapeake Bay Spatial and temporal dynamics of suspended particle characteristics and composition in Navigation Pool 19 of the Upper Mississippi River data Asian carp acoustic stimuli data Missouri River bend classification data sets Lake Michigan common loon dive data Preliminary evaluation of behavioral response of nesting waterbirds to small unmanned aircraft flight The eight-day interval during which amphibians first called annually at individual study wetlands across four study areas Mineral content, bulk density, and beryllium-7 activity of wetland soils of the Davis Pond Freshwater Diversion Outfall Area, Louisiana, in 2015 Priority sampling locations in the U.S., Canada, and Mexico for the Integrated Monarch Monitoring Program Ephemeral channel heads and digital elevation models used to extract stream networks in Clarksburg, MD (ver. 2.0, October 2021) Field spectra, UAS-based hyperspectral and RGB images, and in situ measurements of turbidity and Rhodamine WT dye concentration from an experiment conducted at the USGS Columbia Environmental Research Center, Columbia, MO, on April 2, 2019 Field spectra from an experiment conducted at the USGS Columbia Environmental Research Center, Columbia, MO, on April 2, 2019 Comparisons of Gambel's quail survey methods conducted in 2016 within the Mohave Desert of California with results and summaries Image and biometric data for fish from Great Lakes tributaries collected during spring 2019 Projected future habitat, elevation change, and carbon accumulation of coastal wetlands in the Nisqually River Delta, Washington Great Lakes Coastal Wetland Restoration Assessment (GLCWRA) Upper Peninsula, U.S.: Dikes USGS National Wildlife Health Center necropsy results to determine cause of illness/death for seabirds collected in Alaska from January 1, 2017 through December 31, 2021 Assessment of Giant Sequoia Mortality and Regeneration within Burned Groves in Sequoia and Kings Canyon National Parks (ver. 2.0, January 2024) Field spectra from an experiment conducted at the USGS Columbia Environmental Research Center, Columbia, MO, on April 2, 2019 Field spectra, UAS-based hyperspectral and RGB images, and in situ measurements of turbidity and Rhodamine WT dye concentration from an experiment conducted at the USGS Columbia Environmental Research Center, Columbia, MO, on April 2, 2019 Ephemeral channel heads and digital elevation models used to extract stream networks in Clarksburg, MD (ver. 2.0, October 2021) Preliminary evaluation of behavioral response of nesting waterbirds to small unmanned aircraft flight Projected future habitat, elevation change, and carbon accumulation of coastal wetlands in the Nisqually River Delta, Washington Mineral content, bulk density, and beryllium-7 activity of wetland soils of the Davis Pond Freshwater Diversion Outfall Area, Louisiana, in 2015 Assessment of Giant Sequoia Mortality and Regeneration within Burned Groves in Sequoia and Kings Canyon National Parks (ver. 2.0, January 2024) Spatial and temporal dynamics of suspended particle characteristics and composition in Navigation Pool 19 of the Upper Mississippi River data Great Lakes Coastal Wetland Restoration Assessment (GLCWRA) Upper Peninsula, U.S.: Dikes Elk movement and predicted number of brucellosis-induced abortion events in the southern Greater Yellowstone Ecosystem (1993-2015) Effects of local shoreline and subestuary watershed condition on waterbird use influences of geography scale and season in the Chesapeake Bay Lake Michigan common loon dive data Comparisons of Gambel's quail survey methods conducted in 2016 within the Mohave Desert of California with results and summaries Missouri River bend classification data sets Image and biometric data for fish from Great Lakes tributaries collected during spring 2019 The eight-day interval during which amphibians first called annually at individual study wetlands across four study areas USGS National Wildlife Health Center necropsy results to determine cause of illness/death for seabirds collected in Alaska from January 1, 2017 through December 31, 2021 Large River Monitoring Forum Fish Assemblage Database 2016 Priority sampling locations in the U.S., Canada, and Mexico for the Integrated Monarch Monitoring Program