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This data set consists of monthly averages of soil and litter properties. Rows are grouped in the following order: year, month, vegetation type, plot ID. Within a single month five plots were sampled within each of the 2 vegetation types (10 plots total). Columns F+ represent individual measurements.
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A site in north eastern MI, Oscoda Township, has some of the highest recorded exposure in birds to perfluorinated substances (PFASs) in the U.S. Some egg and plasma concentrations at that location exceeded the lowest reproductive effect threshold established for two avian laboratory species. The objectives of this study were to determine whether there were reproductive effects or physiological responses in a model bird species, the tree swallow (Tachycineta bicolor), associated with this extremely high exposure to PFASs. The lack of exposure above background to other contaminants at this site allowed for an assessment of PFAS effects without the complication that responses may be caused by other contaminants. A...
Aerial imagery for the Upper Mississippi River System (UMRS) Navigational Pool 5 drawdown follow-up was collected in true color (TC) in August of 2015 at 6”/pixel using a mapping-grade Applanix DSS 439 digital aerial camera. All TC aerial images were orthorectified, mosaicked, and compressed into a JPEG2000-format image. The TC aerial images were interpreted and automated using a genus-level 150-class Long Term Resource Monitoring (LTRM) vegetation classification. The 2015 vegetation database was prepared by or under the supervision of competent and trained professional staff using documented standard operated procedures.
We applied Zequanox using a custom-engineered, boat mounted application system to replicated 0.30 Hectare plots within a small inland lake. The objectives of these applications were to determine if uncontained, open-water Zequanox applications could effectively control zebra mussel populations and protect native unionid mussel populations within zebra mussel infested systems. The datasets included are as follows: Exposure Water Chemistry Hardness and Alkalinity Native Mussel Sonde Water Chemistry Zebra Mussel Density Zebra Mussel Length Zebra Mussel Mortality Zequanox Concentration ShapeFiles: PLOTS, UNIONID, ZEQUANOX CONCENTRATION, ZM_DENSITY, ZM_MORTALITY
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Invasive species may vary in their seasonal distribution and abundance due to environmental conditions such as precipitation and temperature. Bigheaded carps, which include silver and bighead carp, are one such taxon of invasive species that appear to change habitats seasonally. Seasonal changes in bigheaded carp distribution may occur because of hydrological changes, water temperature changes, and spawning activities. Monitoring this seasonal dispersal and migration is important for management to control the population size and spread of the species. We examined if environmental DNA (eDNA) approaches could detect seasonal changes in the occurrence of DNA in water samples and used these approaches to calculate the...
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During summer 2019, botanists with the Maine Natural Areas Program collected data from 94 vegetation plots for plant community characterization. The sampling data were entered into the National Park Service PLOTS version 4.0 (National Park Service 2018) for analyses to characterize vegetation associations in the U.S. National Vegetation Classification. An accuracy assessment was performed on the draft version of the vegetation map layer. During the summer of 2020, field crews collected data from 107 stratified and randomly selected sites for evaluating the accuracy of the vegetation map layer for those map classes representing U.S. National Vegetation Classification associations. The accuracy assessment field data...
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Observations and subtle shifts of vegetation communities in western Lake Erie have USGS researchers concerned about the potential for Grass Carp to alter these vegetation communities. Broad-scale surveys of vegetation using remote sensing and GIS mapping, coupled with on-the-ground samples in key locations will permit assessment of the effect Grass Carp may have already had on aquatic vegetation communities and establish baseline conditions for assessing future effects. Existing aerial imagery was used with object-based image analysis to detect and map aquatic vegetation in the western basin of Lake Erie.
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To describe calling activity of Pseudacris crucifer in relation to temperature, precipitation, and wetland water levels, we programmed an acoustic recorder (Wildlife Acoustics) to sample seasonal amphibian calls remotely at study site SC4DAI2 in the St. Croix National Scenic Riverway from 2008 to 2012. We programmed the recorder to sample for five minutes at the top of every hour of every day from late winter/early spring through late summer. We used the Songscape option in Songscope software to generate annual summaries of all of our acoustic samples from SC4DAI2. These summaries included a median dB level for each prescribed frequency within each recording. Pseudacris crucifer, the spring peeper, inhabited SC4DAI2...
The shapefiles depict the valley bottom areas over which HEC-RAS model results were summarized. Valley bottoms were manually delineated in ArcMap by visually interpreting LIDAR terrain models and aerial imagery. Substantial changes in elevation, curvature, and slope were interpreted within the context of their position within the study reach to be channel banks and valley walls. Such areas were excluded from the valley bottom delineation.
Since 2008, over 1,400 quadrats and about 2,500 mussels have been systematically sampled within West Newton Chute (WNC), contributing to a diverse assemblage of 25 live species, including 2 federally endangered species, and 10 Minnesota listed species. West Newton Chute is a 2.4 km long side channel in Navigation Pool 5 of the Upper Mississippi River and has an overall aquatic area of ~75 ha. The Minnesota Department of Natural Resources has been quantitatively sampling a mussel bed here (~650 meters long X 170 meters wide) annually since 2008. About 200 systematically-placed 0.25 m2 quads are sampled annually and the quads are spaced ~25 m apart. Briefly, divers excavate substrates to a depth of ~15 cm and place...
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From 1994-1997 I surveyed breeding birds and sampled vegetation at 391 random points on UMR floodplain forest along a latitudinal gradient to characterize bird assemblages and associations with gradients in forest structure at the local survey point and land cover composition within 200m radius of survey points (landscape scale). We conducted 10 minute 50m fixed radius point counts (Ralph et al. 1993) to survey birds during the breeding period between 30 May and 10 July in all years. We sampled the southernmost pool (13) first and then progressed to each pool in succession northward, finishing in Pool 4, sampling each point once a season. Surveys were conducted from 30 minutes before to five hours after local sunrise....
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High-resolution digital aerial imagery was collected on August 24, 2018, with an 80-megapixel Phase One iXU-R 180 natural color aerial camera co-mounted with a Phase One iXU-RS 160 achromatic aerial camera. Software co-registers the simultaneously collected images to create 4-band imagery that can be displayed in either true color (RGB) or color-infrared (CIR) format. The camera system is connected to the plane's positioning and orientation system and precise metadata was generated for each exposure. This imagery was intended to be used as a base layer for object-based image analysis (OBIA) to map aquatic vegetation in western Lake Erie as well as shallow areas along the shoreline of the eastern portion.
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Data set includes water Sr:Ca, Ba:Ca, and δ18O for the Upper Mississippi River and tributaries and otolith Sr:Ca, Ba:Ca, and δ18O data from bigheaded carp collected in pools 19-21 of the Upper Mississippi River. Abstract from manuscript: Knowledge of environments used during early life history and movement patterns of Bighead Carp (Hypophthalmichthys nobilis) and Silver Carp (H. molitrix), collectively termed bigheaded carps, in the Upper Mississippi River (UMR) would be valuable for informing control measures to limit further population expansion and impacts of these species. Lock and Dam 19 (LD19) is a high-head dam on the UMR that delineates downriver areas where bigheaded carps are well-established from upriver...
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The Katahdin Woods and Waters National Monument Seboeis Unit Vegetation Mapping Project was initiated in the fall of 2019 by a grant through the USGS Natural Resource Preservation Program to classify and map vegetation types of the Seboeis Unit thereby providing resource managers and biological researchers with useful baseline vegetation information. The Study Area Boundary (SAB) for this project is similar to, but not exactly the same as, the official boundary for the Seboeis Unit. Because of uncertainty on the exact location of the Seboeis Unit boundary, mapping may have occurred beyond the official boundary. Additionally, this SAB is based upon the Seboeis Unit boundary as it appeared in September of 2019.
Transects in backwaters of Navigation Pools 4 and 8 of the Upper Mississippi River (UMR) were established in 1997 to measure sedimentation rates. Annual surveys were conducted from 1997-2002 and then some transects surveyed again in 2017-18. Changes and patterns observed were reported on in 2003 for the 1997-2002 data, and a report summarizing changes and patterns from 1997-2017 will be reported on at this time. Several variables are recorded each survey year and placed into an Excel spreadsheet. The spreadsheets are read with a SAS program to generate a SAS dataset used in SAS programs to determine rates, depth loss, and associations between depth and change through regression.
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The sampling locations provided here were selected as a two-stage Generalized Random Tessellation Stratified (GRTS) sample (Stevens & Olsen 2004). The first stage of the GRTS draw used a master sample developed by the North American Bat Monitoring Program (Loeb et al. 2015) from a 10 x 10 km grid placed over the conterminous U.S., Canada, and Mexico. Each 10 x 10 km grid cell (hereafter, master cell) was assigned a GRTS rank by NABat. The rank represents the priority order in which master cells should ideally be sampled. For the second stage of the draw, sampling points within a master cell were selected. Each point was defined as a 30 x 30 m cell of the GIS raster that defined monarch-relevant habitat. Sampling...
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We sampled vegetation and breeding birds in Upper Mississippi River floodplain forest edge and interior areas to (1) measure Phalaris cover and (2) evaluate if the breeding bird assemblage responded to differences in Phalaris cover or other forest structure variables. Data are counts of birds collected during 3 surveys within 50m at each site using 10 minute point count methods. Vegetation was sampled using a releve technique at the bird count point within 10m of the point.
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This set of non-spatial tables provides a detailed link (crosswalk) between the general classification within Long Term Resource Monitoring (LTRM) land cover/use (LCU) geospatial layers and the U.S. National Vegetation Classification (USNVC), current as of April 2017. The Upper Mississippi River Restoration (UMRR) Program’s LTRM element has produced LCU data over the past three decades consisting of geospatial layers (maps) showing locations of vegetation and developed lands within the Upper Mississippi River System (UMRS). The LCU data layers contain a classification of 31 general classes specifically developed to meet needs and objectives of the LTRM element of the UMRR Program. Because the LTRM classification...
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We surveyed fixed-width transects to determine waterbird distribution and estimate relative density. Transects generally paralleled shorelines to maximize efficiency and safety. Fixed-width transects were spaced at 3.2 and 4.8 km intervals and extended up to 32 km offshore so as to include waters with depth up to 80 m. Transects were established using snapPLAN software (TRACK’AIR Aerial Survey Systems, The Netherlands). Surveys were flown at an average ground speed of about 220 km/h at an altitude of about 61-76 m above the water using a US Fish and Wildlife Service fix-winged aircraft (Partenavia P68 Observer 2). Two trained observers, one on each side of the plane, identified and tallied waterbirds within 200...
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Invasion of North American waters by Dreissena polymorpha and D. rostriformis bugensis has resulted in declines in native North American Unionoida mussels. Dreissenid mussels biofoul unionid mussels in large numbers and interfere with unionid movement, acquisition of food and ability to open and close their shells. Initial expectations for the Great Lakes were that unionids would be extirpated where they co-occur with dreissenids, but recently adult and juvenile unionids have been found alive in several apparent refugia. These unionid populations may persist due to reduced dreissenid biofouling in these areas, and/or due to processes that remove biofoulers. For example, locations inaccessible to veligers may reduce...
map background search result map search result map Spatial Variation in Biofouling of a Unionid Mussel (Lampsilis siliquoidea) Across the Western Basin of Lake Erie Data 2015 Pool 5 Drawdown Land Cover/Land Use Data Seasonal trends in eDNA detection and occupancy of bigheaded carps, Wabash River, IN: Raw Data Effects of Flood Inundation and Invasion by Phalaris arundinacea on Nitrogen Cycling in an Upper Mississippi River Floodplain Forest data Lake Erie, Western Basin Aquatic Vegetation data Vermillion/Cannon River Bottoms Important Bird Area Raw Breeding bird survey data Lake Michigan 2011-13 aerial surveys common loon observations Crosswalk between UMRR General Classification and USNVC 2017 Daily calling activity for Pseudacris crucifer at site SC4DAI2 in the St. Croix National Scenic Riverway from 2008 to 2012, as indicated by the results of integrating daily median dB values across 2900 to 3200 Hz and 2100 to 2300 h Priority sampling locations for the Integrated Monarch Monitoring Program Seneca Shapefiles depicting the valley bottom areas Upper Mississippi River water and bigheaded carp otolith chemistry data 1990s bird and vegetation data from UMR floodplain forest Perfluoroalkyl contaminant exposure in tree swallows nesting at Clarks Marsh, Oscoda, MI Dataset Mussel Density Quadrat Sampling Locations in West Newton Chute from 2008 to 2017 Zebra Mussel Mortality - Assessment of uncontained Zequanox applications in a Midwestern lake data Backwater Sedimentation in Navigation Pools 4 and 8 of the Upper Mississippi River data 2018 Eastern Lake Erie Shoreline 4-Band Mosaics and Orthophotos Katahdin Woods and Waters National Monument Seboeis Unit Vegetation Mapping Project: Project Boundary Polygon Katahdin Woods and Waters National Monument Seboeis Unit Vegetation Mapping Project: Vegetation Points (Accuracy Assessment Sites and Vegetation Plots) Mussel Density Quadrat Sampling Locations in West Newton Chute from 2008 to 2017 Seneca Shapefiles depicting the valley bottom areas Zebra Mussel Mortality - Assessment of uncontained Zequanox applications in a Midwestern lake data Katahdin Woods and Waters National Monument Seboeis Unit Vegetation Mapping Project: Vegetation Points (Accuracy Assessment Sites and Vegetation Plots) Katahdin Woods and Waters National Monument Seboeis Unit Vegetation Mapping Project: Project Boundary Polygon 2015 Pool 5 Drawdown Land Cover/Land Use Data Effects of Flood Inundation and Invasion by Phalaris arundinacea on Nitrogen Cycling in an Upper Mississippi River Floodplain Forest data Vermillion/Cannon River Bottoms Important Bird Area Raw Breeding bird survey data Perfluoroalkyl contaminant exposure in tree swallows nesting at Clarks Marsh, Oscoda, MI Dataset Upper Mississippi River water and bigheaded carp otolith chemistry data Lake Erie, Western Basin Aquatic Vegetation data Backwater Sedimentation in Navigation Pools 4 and 8 of the Upper Mississippi River data Daily calling activity for Pseudacris crucifer at site SC4DAI2 in the St. Croix National Scenic Riverway from 2008 to 2012, as indicated by the results of integrating daily median dB values across 2900 to 3200 Hz and 2100 to 2300 h Spatial Variation in Biofouling of a Unionid Mussel (Lampsilis siliquoidea) Across the Western Basin of Lake Erie Data 2018 Eastern Lake Erie Shoreline 4-Band Mosaics and Orthophotos Seasonal trends in eDNA detection and occupancy of bigheaded carps, Wabash River, IN: Raw Data Lake Michigan 2011-13 aerial surveys common loon observations 1990s bird and vegetation data from UMR floodplain forest Crosswalk between UMRR General Classification and USNVC 2017 Priority sampling locations for the Integrated Monarch Monitoring Program