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The Bull Trout (Salvelinus confluentus) is widely distributed within the region and occupies a variety of large lakes, small headwater streams and larger river systems. Of all the native salmonids in the Pacific Northwest, the Bull Trout generally has the most specific habitat requirements, which are often referred to as “the four Cs”: cold, clean, complex, and connected habitat. In November 1999, the U.S. Fish and Wildlife Service listed all Bull Trout populations within the lower 48 States of the United States as threatened pursuant to the Endangered Species Act. The U.S. Fish and Wildlife Service’s 2015 Bull Trout Recovery Plan lists historical habitat loss and fragmentation; interactions with nonnative species...
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Partnerships - Eastern Brook Trout Joint Venture, Great Lakes Basin Fish Habitat Partnership and Atlantic Coastal Fish Habitat Partnership Almost 32 miles of streams and 260 acres of riparian habitat were rehabilitated to improve Eastern Brook Trout habitat. Nearly 800 feet of riverine bottom in Maine was restored to improve spawning habitat for diadromous fish. Two acres of oysters were installed in the Great Bay Estuary (310,000 spat) to stabilize sediments, improve water quality, and provide habitat for species such as river herring, Atlantic Tomcod, Winter Founder, and Striped Bass. Partners removed or improved 46 barriers, which allowed inland and diadromous fish to access an additional 108 miles of riverine...
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The Greater Redhorse (Moxostoma valenciennesi) is sensitive to habitat changes, particularly excessive siltation, and pollution. Other threats include river channelization, alterations to flow regimes, dam construction, and removal of riverside vegetation. Barriers are especially problematic as this is a wide-ranging species that has different flow and habitat requirements for different stages of development.
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The Chesapeake Logperch is native to Maryland and Pennsylvania; populations in Virginia have been extirpated. It requires rocky habitat in larger rivers and is listed as imperiled. This species has suffered from water quality and habitat degradation in the larger rivers in Mid-Atlantic States with mining, agriculture, and wastewater discharges, which causes elevated metal concentrations, suspended solids, nutrient loading, pH, and high oxygen demand in river waters.
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The Columbia River is the fourth largest river by volume in North America, draining an area the size of France (670,000 square kilometers). There are 14 dams on the main stem of the Columbia River and more than 450 dams throughout the entire Columbia Basin. The dams on the Columbia River and its tributaries produce half of the electricity used in the Pacific Northwest. These dams have completely altered river habitat and significantly changed the river’s flow, water quality, and Pacific salmon spawning runs along with the survival of out-migrating smolts. By discharge, the Sacramento River is the second largest river on the west coast of the contiguous United States, after only the Columbia River, which has almost...
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Five National Fish Habitat Partnerships are working to protect intact and improve altered fish habitat in Alaska including: 1) Southeast Alaska Fish Habitat Partnership; 2) Matanuska-Susitna Basin Salmon Habitat Partnership; 3) Kenai Peninsula Fish Habitat Partnership; 4) Southwest Alaska Salmon Habitat Partnership; and 5) Western Native Trout Initiative. The results of some of their work includes: Removed 17 fish passage barriers on high priority salmon streams in the Anchorage area, opening 54 miles of upstream habitat and access to 604 acres of lakes, all critical rearing areas for Pacific salmon and other salmonids. Worked with partners and private landowners to voluntarily protect nearly 8,000 acres of...
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Partnership - Desert Fish Habitat Partnership Shoshone Pupfish are one of the most imperiled species in the Death Valley region due to their natural rarity, historic disruption of their habitats, lack of replication of the one remaining population, and genetic effects of small population size. Shoshone Spring and wetlands have been owned by one family for over 50 years. Endemic Shoshone Pupfish were considered extinct by 1969, but rediscovered in a ditch near the springs in 1986. A single pond was built and stocked with 75 of these fish, believed to be the last of their kind. The purpose of the project was to construct two new additional habitats, one secluded in a mesquite bosque, and one in a landscaped...
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While this assessment has found that many of the inland streams were at a low or very low risk of degradation, some fish habitat disturbances, including water diversions, timber harvest practices, and intensity of livestock grazing in watersheds, could not be directly included in this assessment because national datasets of these disturbances and their component variables are unavailable. These disturbances are known to have major, negative effects on fish habitats in this region. Their absence from this assessment, along with absences of other disturbances, has likely produced an overestimation of habitat condition (quality) for some water bodies. These gaps need to be kept in mind while examining the results....
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The Guadalupe Bass (Micropterus treculii) is endemic to the spring-fed central Texas rivers and streams. This species is threatened by a number of factors that have contributed to its overall decline including decreased stream flows, habitat loss and degradation, and hybridization with non-native Smallmouth Bass.
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Partnership - Eastern Brook Trout Joint Venture Historically, Nash Stream, New Hampshire was known as a high quality wild Brook Trout stream that provided exceptional angling opportunities. Unfortunately in 1969, the dam used to release water from Nash Bog Pond for log drives failed sending a torrent of water akin to the 500-year flood event down Nash Stream. Immediately thereafter and in response to the dam failure, stretches of Nash Stream were straightened and its banks made higher by bulldozers. Consequently, much of the instream and riparian habitat was altered to the detriment of wild Brook Trout and other fish species. Additionally, undersized culverts were placed in many essential Brook Trout spawning...
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The Central Mississippi River states contain the confluences of the Upper Mississippi River with the Ohio, Missouri, and Arkansas rivers. Alteration of these large rivers for transportation and flood control has substantially altered their ecological characteristics, eliminating natural floodplains, sandbars, and meanders, and impeding fish migration routes. Other major tributary rivers include the Tennessee, Cumberland, Kentucky, and Osage, all very large rivers in their own right. Large reservoirs are common in the landscape of this region and have increased recreational opportunities for sportfish as well as many other activities, but typically suffer from dissolved oxygen issues in both the reservoirs and in...
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Partnerships - Driftless Area Restoration Effort, Great Lakes Basin Fish Habitat Partnership, Great Plains Fish Habitat Partnership, Midwest Glacial Lakes Partnership, Fishes and Farmers Partnership, and Reservoir Fisheries Habitat Partnership Partners removed: one barrier in Minnesota that increased fish passage to over 3 miles of streams; 12 barriers in Wisconsin that increased fish passage by 12 miles and reconnected 15 acres of wetlands to streams; and 13 barriers in Michigan that reconnected over 147 miles of streams. In Wisconsin, enhanced 13.0 stream miles for Brook Trout including tributary spawning habitat, 20.5 miles of mixed Brook/Brown Trout water, and 13.2 miles of stream for Brown Trout. Improved...
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The Prairie Chub (Macrhybopsis australis) requires streams with gravel and rock bottoms and can live with high levels of dissolved salts that occur in intermittent streams in the upper Red River Basin, Texas. This Texas-listed species of special concern is potentially threatened by large-scale chloride removal planned for the upper Red River Basin that could drastically change the stream chemistry required by this unique fish species.
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Runoff and other land-based pollution from large riverside cities such as Philadelphia, Pittsburgh, Wilmington, and Washington, DC, New York City, and surrounding suburban sprawl adversely affect fish habitats in the Delaware, Susquehanna, Ohio, Hudson,and Potomac River basins, as well as many smaller streams. A concentration of human population and impervious surfaces extends from northeastern New Jersey to southeastern Virginia and to the coastal areas of the Mid-Atlantic. For example, the 2015 assessment determined high degradation risk in streams along the I-95, I-81, and I-79 corridors. Urban development continues to spread, as rural land in the states of this region declined by 5.9 million acres from 1982...
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Arctic Grayling (Thymallus arcticus) now inhabits less than 5 percent of its historic river range in the Mountain States. This species requires high-quality coldwater habitat with long, un-fragmented reaches. Historically, glacial relict river populations were found in the Upper Missouri River Basin with another now extinct population in the Midwest (Michigan). The Arctic Grayling has been affected by water withdrawals, barriers to movement, and habitat degradation. One of the last strongholds, the Big Hole River in Montana, was reduced to a trickle in the summers of the 1990s as a result of irrigation withdrawals. Recent cooperative efforts, which include better water management, have improved populations of Arctic...
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Map of the risk of current fish habitat degradation of inland streams of the Southwestern States.
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A total of 15 large dams have been constructed along the 1,040-mile (1,674-kilometer) Snake River from its headwaters in the Rocky Mountains to its mouth on Lake Wallula, a reservoir formed behind McNary Dam on the Columbia River. Compared to the lower Snake River, the rest of the Columbia River watershed, and most of the Rocky Mountain West, the Upper Snake ecoregion has a high level of unique organisms (endemism), especially among freshwater mollusks, such as snails and clams. There are at least 21 snail and clam species of special concern, including 15 that appear to exist only in single clusters. There are 14 fish species found in the Upper Snake region that are not present elsewhere in the Columbia River watershed,...
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The Woundfin (Plagopterus argentissimus) once ranged from southwest Utah to southern Arizona in the Colorado and Gila River basins, but now only occur in 12 percent of its historical range, and is classified as critically endangered. It prefers quiet water adjacent to riffles of swift, warm, turbid small to medium rivers, but spawns in swifter flowing water over gravel. Populations have been affected by habitat loss, fragmentation, and degradation caused by dams and water diversions. Woundfin populations have also shown declines in areas where the non-native Red Shiner has proliferated due to changes in water flow patterns caused by dams and diversions. The Red Shiner is both a predator of and a competitor with...
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The Gulf Sturgeon (Acipenser oxyrinchus ssp. desotoi) as the name implies lives in the estuaries of the Gulf of Mexico but migrates up coastal rivers to spawn (anadromous). It is found in rivers from spring until fall and in the Gulf during the winter. It feeds heavily while in the Gulf, but adults eat very little (or not at all) while in the rivers. The species declined dramatically after the late 1800s. It fell victim to overharvest for its meat and roe, dam construction, and dredging activities. The largest population is currently in the Suwannee River in Florida.
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Wheat, corn, and soybeans are some of the primary crops grown in the Northern Plains States. About 8.5 million acres, one-fourth of the state’s land area, are used to grow wheat in North Dakota. In areas of intense cultivation, streams are often channelized for irrigation, reducing their habitat value for fish as temperature, in-channel cover, and stream flow are significantly changed. In addition, watersheds dominated by row-crop agriculture discharge excess sediment and nutrients to downstream waters. Agricultural water withdrawal was also one of the most limiting disturbances identified in this assessment. A large number of groundwater wells in the Nemaha River basin in southeast Nebraska, an area dominated by...


map background search result map search result map Facts About Mountain States Southwestern States - Risk of Current Fish Habitat Degradation Map Fish Habitat Partnership Activities for the Upper Midwest States Summary of scientific findings for Pacific Coast States Summary of Scientific Findings for Central Mississippi River States Habitat Trouble for Arctic Grayling in Mountain States Habitat Trouble for Greater Redhorse in Central Midwest States Fish Habitat Partnerships Making a Difference in the Death Valley Region Habitat Trouble for Guadalupe Bass in Southern Plains States Habitat Trouble for Bull Trout in Pacific Coast States Habitat Trouble for Prairie Chub in Southern Plains States Fish Habitat Partnership Activities for Alaska Fish Habitat Partnerships Making a Difference in Nash Stream, New Hampshire Description of Urban Land Use and Pollution as Human Activities Affecting Fish Habitat in Mid-Atlantic States Habitat Trouble for Chesapeake Logperch in Mid-Atlantic States Facts About Pacific Coast States ​Habitat Trouble for Gulf Sturgeon in Eastern Gulf of Mexico States Habitat Trouble for Woundfin in Southwestern States Partnership Activities for the Northeastern States Description of Agriculture as a Human Activity Affecting Fish Habitat in Northern Plains States Description of Urban Land Use and Pollution as Human Activities Affecting Fish Habitat in Mid-Atlantic States Habitat Trouble for Chesapeake Logperch in Mid-Atlantic States Description of Agriculture as a Human Activity Affecting Fish Habitat in Northern Plains States Fish Habitat Partnerships Making a Difference in Nash Stream, New Hampshire Partnership Activities for the Northeastern States Habitat Trouble for Greater Redhorse in Central Midwest States Summary of Scientific Findings for Central Mississippi River States Fish Habitat Partnership Activities for the Upper Midwest States ​Habitat Trouble for Gulf Sturgeon in Eastern Gulf of Mexico States Summary of scientific findings for Pacific Coast States Fish Habitat Partnerships Making a Difference in the Death Valley Region Habitat Trouble for Bull Trout in Pacific Coast States Facts About Pacific Coast States Southwestern States - Risk of Current Fish Habitat Degradation Map Habitat Trouble for Woundfin in Southwestern States Facts About Mountain States Habitat Trouble for Arctic Grayling in Mountain States Habitat Trouble for Guadalupe Bass in Southern Plains States Habitat Trouble for Prairie Chub in Southern Plains States Fish Habitat Partnership Activities for Alaska