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This collection of GIS layers was prepared for the report Alaska Arctic Marine Fish Ecology Catalog (U.S. Geological Survey Scientific Investigations Report 2016–5038). The layers display geographic distribution and sampling locations for Arctic marine fish species in the region of United States sectors of the Chukchi and Beaufort Seas. Certain diadromous species (for example, Pacific salmon, char, and whitefishes) are treated as marine fishes (McDowall, 1987) because much of their life cycle is in marine and brackish environments. This synthesis of information is meant to provide current information and understanding of this fauna and its relative vulnerability to changing Arctic conditions. There are 104 species...
Data were collected in 2017 by researchers at the USGS, USDA-ARS, and University of Wyoming on the food webs of plants, prairie dogs, arthropods, and birds in the Thunder Basin National Grassland. Data were collected from 87 sites in order to parameterize a structural equation model linking prairie dog impacts to changes in vegetation, arthropods, and birds. Abiotic information such as topographic wetness index, terrain roughness, and soil characteristics were estimated at the same set of plots in order to account for abiotic variation across the landscape.
Categories: Data;
Tags: Botany,
Ecology,
Thunder Basin,
Thunder Basin,
Thunder Basin National Grassland,
American pikas (Ochotona princeps) are small lagomorphs that live in mountainous talus areas of western North America. Studies on the histopathology of American pikas are limited. This report summarizes the clinical histories, and gross and histologic findings of 12 American pikas, including nine captive and three wild animals. Death was often attributed to stress (transport, handling, and anesthesia) with few to no premonitory clinical signs. Two cases died due to infection: one had bacterial pyogranulomatous dermatitis, cellulitis, and lymphadenitis with sepsis; the other case had fungal necrotizing colitis. Incidental parasite infections included sarcocystosis, nematodiasis (oxyurids), and ectoparasitism. Most...
Categories: Data;
Tags: American pika,
Colorado,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Wildlife Disease,
This dataset contains information from visual encounter surveys conducted between 2012 and 2016 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort in the Oregon Cascade Mountain Range. We surveyed 91 sites using a rotating frame design in the Klamath and Deschutes Basins, Oregon, which encompass most of the species' core extant range. Data consist of spotted frog counts aggregated by date, location, and life stage, as well as data on environmental conditions at the time of each survey.
Categories: Data;
Tags: Aquatic ecology,
Cascade Range,
Deschutes County,
Klamath County,
Lane County,
The point data file ("Soda Fire Point and Pasture Data (2016).Point Data.csv") includes 2016 vegetative cover values of exotic annual grass and perennial grass measured within three different types of plots for 75 pastures in the Soda Fire, which burned in 2015: 6m² plot using a grid-point intercept photo software, SamplePoint (Booth et al. 2006), 1m² quadrat using an unguided rapid ocular estimate in the field, 531m² circular plot using an unguided rapid ocular estimate in the field. Smaller plots were nested within larger plots. The pasture data file ("Soda Fire Point and Pasture Data (2016).Pasture Data.csv") includes pasture level metrics of area, elevation, precipitation, slope, heatload, soils, and herbicide...
Snags provide critical habitat for nearly one-third of wildlife species in forests of the Pacific Northwest, so historic declines in snags are thought to have had a strong impact on biodiversity. Resource managers often create snags to mitigate the scarcity of snags within managed forests, but information regarding the function and structure of created snags across long time periods (>20 years) is absent from the literature. Using snags that were created by topping mature Douglas-fir trees (Pseudotsuga menziesii) as part of the OSU College of Forestry Integrated Research Project, we measured characteristics of 731 snags and quantified foraging and breeding use of snags by birds 25-27 years after their creation....
***This dataset is superseded by Adams, M.J., Pearl, C.A., McCreary, B., Galvan, S.K., and Rowe, J.C., 2019, Oregon Spotted Frog (Rana pretiosa) Monitoring at Jack Creek 2015-2018 (final): U.S. Geological Survey data release, https://doi.org/10.5066/P9L2XC5B.*** This dataset contains information from mark-recapture surveys conducted in 2015 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort at Jack Creek, Klamath County, Oregon. Data consist of spotted frog counts aggregated by date, location, life stage, and sex, as well data on environmental conditions at the time of each survey.
This dataset is support materials for the publication "Crop type classification, trends, and patterns of central California agricultural fields from 2005 – 2020". This data release is comprised of two child datasets. The first dataset, 'Labeled_CropType_Points', is a shapefile that consists of randomly selected point locations in which crop types were verified using high resolution imagery for each examined year across the study period (2005 - 2020). The second dataset, 'Central_CA_Classified_Croplands', is also a shapefile, but contains polygons of 9 classified crop types derived from a random forest machine learning classifier for central California for each examined year across the study period (2005 - 2020).
These data were used to examine drivers behind changes in water temperature downriver of dams across the western U.S. from 1995-2015 and the influence of such changes on rainbow trout recruitment and rainbow and brown trout adult length. First, we linked reservoir storage capacity and dam size to the warmest monthly water temperature per water year (WY) to assess the influence of low storage capacity (shallow reservoirs) on downstream water temperature. We then took results from previously published Generalized Linear Mixed Models (GLMM) that assessed the influence of physical and biological predictors (e.g., flow, trout density, reservoir metrics) on trout recruitment and adult size and added mean annual, maximum...
This data release is comprised of tidal marsh biomass data and spatial predictions of peak biomass and Julian day of peak biomass using data from the Landsat archive. Aboveground biomass dry weight of mixed-species plots (25x50 cm) at a tidal marsh in Willapa Bay, Washington were used to establish a relationship between biomass and tasseled cap greeness (TCG). The julian day of annual peak greenness and the value of annual peak greenness for 32 years at Bandon National Wildlife Refuge (NWR), Grays Harbor NWR, and Nisqually NWR was calculated by fitting a Gaussian function to the TCG values for a given year. The value of each 30 meter pixel is the Julian day of maximum predicted TCG or the maximum predicted TCG....
These data were used to examine the effectiveness of a non-lethal tool (Bioelectrical Impedance Analysis, "BIA") to estimate the physiological condition of endangered and threatened fishes in the Colorado River Basin. We conducted laboratory trials using hatchery-raised Humpback Chub and Bonytail and wild-captured Roundtail Chub, where fish were subjected to different feeding trials to elucidate a response in physiological condition and different temperature treatments to approximate field conditions. At the end of each 6-week trial fish were removed from tanks, lateral and dorsal measurements of BIA were taken, and fish were sacrificed for proximate composition analysis (lipid, protein, water, ash, dry mass, energy...
Types: Citation;
Tags: Arizona,
Bioelectrical Impedance Analysis,
Bonytail,
Colorado River Basin,
Dorsal measurements,
These data were used to examine how post-fire sedimentation might change in western USA watersheds with future fire from the decade of 2001-10 through 2041-50. The data include previously published projections (Hawbaker and Zhu, 2012a, b) of areas burned by future wildfires for several climate change scenarios and general circulation models (GCMs) that we summarized for 471 watersheds of the western USA. The data also include previously published predictions (Miller et al., 2011) of first year post-fire hillslope soil erosion from GeoWEPP that we summarized for 471 watersheds of the western USA. We synthesized these summarized data in order to project sediment yield from future fires for 471 watersheds through the...
Categories: Data;
Types: Citation;
Tags: A1B emission scenario,
A2 emission scenario,
Annual Post-fire Sediment Yield,
Arizona,
Average Burned Area,
These data represent reproductive ecology characteristics for 4 species of mature female turtles captured at Elephant Butte Reservoir on the Rio Grande River in New Mexico, during two field survey periods in June 2012 and 2013. Data were collected on female reproductive ecology including clutch size, egg size, timing of egg production, and the percentage of reproductive females using X-radiography. The purpose of these data are to add to the deficient information on the reproductive ecology of four turtle species at the Elephant Butte Reservoir on the Rio Grande and Black River in New Mexico. Data contained in this worksheet were analyzed to determine clutch and egg sizes for four native species of turtles (Apalone...
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