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These data were compiled to evaluate the reproductive ecology of Agassiz's desert tortoises (Gopherus agassizzi) in the Sonoran Desert of California using two populations within Joshua Tree National Park, including five reproductive seasons that spanned 20 years (1997-1999, 2015-2016). Compared to their conspecifics inhabiting the Mojave Desert, the reproductive ecology of G. agassizii in the Sonoran Desert is understudied. Climatic variation between the two deserts can affect reproductive ecology, including fecundity and clutch phenology. Mature female tortoises (straight-line carapace length ≥ 20 cm) outfitted with radiotransmitters were located and X-radiographed approximately every 10-14 days during the reproductive...
Categories: Data;
Tags: Agassiz's desert tortoise,
California,
Ecology,
Geography,
Gopherus agassizii,
We conducted a radio telemetry study of adult western spadefoots (Spea hammondii) at 2 sites in southern California to characterize their survival, behavior, and movements from breeding through aestivation to inform conservation and management for the species. These data support the following publication: Halstead, B.J., Baumberger, K.L., Backlin, A.R., Kleeman, P.M., Wong, M.N., Gallegos, E.A., Rose, J.P., and Fisher, R.N., 2021. Conservation implications of spatiotemporal variation in the terrestrial ecology of an ephemeral pool-breeding amphibian. The Journal of Wildlife Management.
Categories: Data;
Tags: California,
Orange County,
Southern California,
Spea hammondii,
USGS Science Data Catalog (SDC),
Data includes satellite derived pre-fire functional group cover of annual and perennial herbaceous, shrubs, bareground and litter across four rangeland megafires in the Western US, as well as field estimated invasive annual grass measurements from the 2nd to 3rd years post-fire. Additional landscape and restoration treatment covariates hypothesized to influence post-fire invasive annual grass cover are included.
This data release links benthic macroinvertebrate sites to both the NHDPlus Version 2 and NHDPlus High Resolution Region 02 networks, hereafter referred to as V2 and HR, using the hydrolink methodology. Linked benthic macroinvertebrate sites are those included in the Chesapeake Bay Basin-wide Index of Biotic Integrity (Chessie BIBI) developed by the Interstate Commission on the Potomac River Basin (ICPRB) and available from the Chesapeake Bay Program (https://datahub.chesapeakebay.net/LivingResources). The data set contains a unique sample identifier created by ICPRB, survey program, coordinates of sample, linked V2 COMID and HR Permanent Identifier, and information regarding uncertainty in the attribution. We strongly...
Categories: Data;
Tags: Aquatic Biology,
District of Columbia (national district),
Ecology,
Hydrology,
Maryland (state),
The U.S. Army Corps of Engineers' Upper Mississippi River Restoration (UMRR) program, through its Long Term Resource Monitoring (LTRM) element, collected aerial imagery of the systemic Upper Mississippi River System (UMRS) during the summer of 2020. A Land Cover/Land Use (LCU) spatial database was developed based on the 2020 aerial imagery, which adds a fourth systemic-wide database to the existing 1989, 2000, and 2010/11 LCU databases. While a crosswalk was used to update the 1989 LCU database (originally developed using a different classification system), the 2000, 2010/11, and 2020 LCU databases share the same classification, making them directly comparable from a classification standpoint. Furthermore, protocols...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Iowa,
USGS-EMA-LOW-MR Landscape Ecology,
USGS-EMA-LOW-PL Mississippi River,
Wisconsin,
aquatic vegetation,
To address the data and information gap for characterizing coastal drought, a coastal salinity index (CSI) was developed using salinity data (Conrads 2016; Conrads and Darby, 2017). The CSI uses an approach similar to the Standardized Precipitation Index (SPI), a readily available drought index that is widely used for monitoring meteorological droughts (McKee and others, 1993). The CSI substitutes total monthly precipitation with monthly mean salinity data to determine the probability of recording a given salinity value in a particular month. The initial investigation demonstrated that the index could be used to delineate short- and long-term drought (saline) and wet (high freshwater inflow) conditions; however,...
Categories: Data;
Tags: Everglades National Park,
USGS Science Data Catalog (SDC),
brackish,
ecology,
estuary,
These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Shapefile;
Tags: California,
Ecology,
Marin County,
Point Reyes National Seashore,
USGS Science Data Catalog (SDC),
This data release includes data and metadata on 1) the coverage and composition of plants 2) species specific plant traits 3) sampling locations and 4) environmental data. All sites were within Hawaii Volcanoes National Park on Hawaii Island. Plant cover data were obtained from National Park Service Inventory and Monitoring Program. Plant trait data was collected for these plots in 2014. This study aims to evaluate how traits of native and exotic plant species change along environmental gradients and what this suggests for plant competition and invasion.
Categories: Data;
Tags: Ecology,
Hawaii,
Hawaii Volcanoes National Park,
USGS Science Data Catalog (SDC),
botany,
This data release includes data and metadata on 1) avian diet 2) seed rain 3) understory plant composition 4) seedling abundance and 5) sampling locations for these sites. In addition it includes data on seedling abundance, grass cover and light levels for a grass removal/seed addition experiment . All sites were within Hakalau Forest National Wildlife Refuge on Hawaii Island. This study looked at multiple biotic interactions that potentially lead to self-reinforcing feedbacks within intact forest and degraded forest sites. Most of this study was done with sampling, however we also implemented an experiment in which we manipulated grass biomass and seed addition to specifically ask how these factors limit native...
Categories: Data;
Tags: Hakalau Forest National Wildlife Refuge,
Hawaii,
avian diet,
botany,
ecology,
The dataset contains 3 components: (1) acceleration data logger (ADL) data, (2) GPS location data, and (3) body temperature data. We have ADL data from pythons in captivity (N = 2) and in free-ranging snakes (N=4). We have GPS data for 3 out of 4 free-ranging snakes. We have body temperature data for all 4 free-ranging snakes.
Categories: Data;
Tags: Ecology,
Everglades,
Florida,
Southern Florida,
USGS Science Data Catalog (SDC),
These are metadata related to the collection of samples on the FK190612 research expedition in the north Pacific Ocean along the Cascadia margin in June 2019. Samples were collected to examine characteristics of methane emissions from seafloor seeps at the edge of hydrate stability and the associated communities.
We used free-ranging northern elephant seals as a model species to investigate maternal transfer of mercury (Hg) to pups in relation to maternal traits, including maternal blood mercury concentrations, and to quantify the links between pup lanugo mercury concentrations and maternal mesopelagic foraging behavior during gestation. We satellite tracked known-age adult females at sea during their seven-month-long foraging trip to determine maternal foraging strategies (geographic locations and diving depths) and quantified mercury concentrations in maternal blood and their pups’ blood and lanugo (which is defined as pup hair grown in utero) early in lactation when seals were hauled out. We then tested how the maternal...
Categories: Data;
Tags: Ecology,
Environmental Health,
Marine Oceanic Mesopelagic Layer,
USGS Science Data Catalog (SDC),
Wildlife Biology,
We investigated the dynamics of canine distemper virus (CDV) in grizzly bears (Ursus arctos) and wolves (Canis lupus) of the Greater Yellowstone Ecosystem (GYE) using serological data collected from 1984 to 2014. 565 sera samples were obtained from 425 unique grizzly bears (134 females and 291 males) from 1984 to 2014 and 319 sera samples were obtained from 285 unique wolves (130 females and 155 males) from 1996 to 2014. Here we provide the unique identifier for each individual, the species and sex, the date the individual was captured, the estimated birth year and age, and the CDV antibody titer results based upon serum neutralization assays.
Categories: Data;
Tags: Grand Teton National Park,
Grizzly bear,
Idaho,
Montana,
USGS Science Data Catalog (SDC),
The focus of this dataset is soil temperature collected on four mountain summits in Glacier National Park, Montana, USA from 2003 through 2018. Two summit sites were established in 2003 on Dancing Lady and Bison Mountain, east of the continental divide. Two additional summit sites were established in 2004 on Pitamakin and Mt. Seward, also east of the continental divide. These four summit sites comprise a target region set up in accordance with the Global Observation Research Initiative in Alpine Environments (GLORIA). GLORIA was initiated by the University of Vienna in 2000 and protocols for operating target regions have been refined and revised since then. Sixty-nine GLORIA target regions now exist throughout the...
This dataset is focused on alpine plant species presence/absence, species turnover, and trends in species abundance on four mountain summits in Glacier National Park, Montana, USA from 2003 through 2014. Two summit sites were established in 2003 on Dancing Lady and Bison Mountain, east of the continental divide. Two additional summit sites were established in 2004 on Pitamakin and Mt. Seward, also east of the continental divide. This multi-summit approach to monitoring alpine plant species follows the protocols of the Global Observation Research Initiative in Alpine Environments (GLORIA) that were initiated by the University of Vienna in 2000 and which have been refined and revised since then. GLORIA summit sites...
Categories: Data;
Tags: CCME-alpine veg,
GLORIA,
Glacier National Park,
Montana,
USGS Science Data Catalog (SDC),
These data were compiled to allow further understanding of how aboveground net primary production of different plant functional types in ecosystems along an elevation gradient in the southwestern U.S. respond to extreme changes in warm-season precipitation (drought and water addition) associated with the North American Monsoon. The objectives of the study were to 1) determine how primary production responds to warm-season precipitation extremes over time; 2) compare production sensitivities to warm-season precipitation (slopes of production – precipitation relationships) across an elevation gradient; 3) evaluate whether the sensitivity of production differed under extreme dry and wet years compared to ambient precipitation....
This dataset is the largest global dataset to date of soil respiration, moisture, and temperature measurements, totaling >3800 observations representing 27 temperature manipulation studies, spanning nine biomes and nearly two decades of warming experiments. Data for this study were obtained from a combination of unpublished data and published literature values. We find that although warming increases soil respiration rates, there is limited evidence for a shifting respiration response with experimental warming. We also note a universal decline in the temperature sensitivity of respiration at soil temperatures >25°C. This dataset includes 3817 observations, from control (n=1812), first (i.e., lowest or sole) level...
Categories: Data,
Publication;
Types: Citation;
Tags: Boreal Forest,
Desert,
Ecology,
Meadow,
Northern Shrubland,
These datasets contain aquatic macroinvertebrate and water quality data collected from 159 wetlands in Montana and North Dakota within the Prairie Pothole Region of the Williston Basin.
The dataset consists of two csv files one for adult snakes and one for captive-reared juvenile snakes. The data contains start times (when snakes entered the study) and end times (when snakes died or were censored from the study) for survival analysis. The data also contains general information about the individual snakes (id, snout-vent length, treatment group, whether or not they were translocated), sex (juveniles only since adults were all female), surface activity (and data needed to calculate surface activity), and average distance moved between telemetry resighting. The above information was used as covariates in the survival models. These data support the following publication: Nguyen, A.M., Todd, B.D....
Categories: Data;
Tags: California,
Ecology,
USGS Science Data Catalog (SDC),
Wildlife Biology,
biota,
These data were used to describe temporal trends in fish communities in the Fountain Creek basin. Fish data were collected between 2003 and 2022. Datasets include fish frequency of occurrence and flathead chub catch per unit of effort. Description of fish sampling methodology are documented in the associated publication (https://doi.org/10.5066/P9PUY4FC).
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