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Probability map of Cheatgrass occurrence in relation to vegetation, abiotic, and anthropogenic features. These data were released prior to the October 1, 2016 effective date for the USGS’s policy dictating the review, approval, and release of scientific data as referenced in USGS Survey Manual Chapter 502.8 Fundamental Science Practices: Review and Approval of Scientific Data for Release.
Probability map of green-tailed towhee occurrence in relation to vegetation, abiotic, and anthropogenic features. These data were released prior to the October 1, 2016 effective date for the USGS’s policy dictating the review, approval, and release of scientific data as referenced in USGS Survey Manual Chapter 502.8 Fundamental Science Practices: Review and Approval of Scientific Data for Release.
Probability map of Halogeton occurrence in relation to vegetation, abiotic, and anthropogenic features. These data were released prior to the October 1, 2016 effective date for the USGS’s policy dictating the review, approval, and release of scientific data as referenced in USGS Survey Manual Chapter 502.8 Fundamental Science Practices: Review and Approval of Scientific Data for Release.
Probability map of least chipmunk occurrence in relation to vegetation, abiotic, and anthropogenic features. These data were released prior to the October 1, 2016 effective date for the USGS’s policy dictating the review, approval, and release of scientific data as referenced in USGS Survey Manual Chapter 502.8 Fundamental Science Practices: Review and Approval of Scientific Data for Release.
These data address experimental evaluations of dietary preference by captive brown treesnakes on Guam. Snakes were collected from the wild in areas with birds present and in areas without birds present 2018–2019. Snakes were then run through preference trials during which they were offered first live lures (mouse and finch) in snake traps on opposite sides of the arena. On the second night, snakes were offered dead carrion (baits) of each prey type (mouse, chicken chick) equal to 30% of their mass. Choices were monitored overnight using game cameras and then transcribed the following day. Individuals were classified as BIRD or NOBIRD snakes based on whether they had birds in their gut contents at the time of capture....
Categories: Data;
Tags: Ecology,
Guam,
Guam National Wildlife Refuge,
Preference,
USGS Science Data Catalog (SDC),
The fathead minnow (Pimephales promelas) is a key model of vertebrate toxicity. Standardized tests of toxicity in fathead minnow have been developed to support regulatory science, and much is known about the response of the species to various environmental pollutants. However, there is little data on genetic variation within the species, despite the potential influence of genetic background on toxicological outcomes. Furthermore, the phylogenetic relationships among Pimephales species are not fully established and rates of evolutionary divergence within the species and genus have not been investigated. This study examined patterns of genetic variation across the genome within a single wild population of fathead...
Nocturnal visual encounter survey data conducted by 29 searchers over 17 transects obtained during a Brown Treesnake rapid response deployment to island of Saipan in 2016. Surveys took place in the vicinity of the Saipan airport and Dandan village (ca. 15.127°N, 145.735°E) from 06 January to 13 March 2016, 6–7 nights/week but with a break in surveying from 26 January through 21 February. During Brown Treesnake searches over 386.8 kilometers, we collected data on selected vertebrate taxa (lizards and small mammals, both potential snake prey) recorded from survey transects with similar vegetation structure (secondary forest dominated by the introduced leguminous tree Leucaena leucocephala; emergent trees were partially...
Categories: Data;
Tags: Emerald Tree Skink,
Green Anole,
Saipan,
USGS Science Data Catalog (SDC),
biota
Oral sylvatic plague vaccine baits (SPV) and placebo baits were distributed once annually from 2013-2016 on treated and non-treated paired plots from 2013-2016. Black-tailed prairie dogs (BTPD) were live-trapped and permanently marked with passive integrated transponders and ear tags on 4 pairs of plots each year from 2013-2017 to provide capture/recapture data for use in estimating BTPD survival. The first data set (CMR_SPV_RAW_CAPTURE_DATA.csv) lists all captures and associated covariates with each line representing data from a single prairie dog. The second data set (CMR_BTPD_WEIGHTS.csv) lists the weight and associated information for each prairie dog at each handling. The third data set (CMR_FLEAS_BY_HOST.csv)...
Categories: Data;
Tags: Charles M. Russell National Wildlife Refuge,
Montana,
Phillips County,
Plague,
Prairie dogs,
Note: this data release has been superseded by version 2.0, available here: https://doi.org/10.5066/P9V54H5K We developed habitat suitability models for invasive plant species selected by Department of Interior land management agencies. We applied the modeling workflow developed in Young et al. 2020 to species not included in the original case studies. Our methodology balanced trade-offs between developing highly customized models for a few species versus fitting non-specific and generic models for numerous species. We developed a national library of environmental variables known to physiologically limit plant distributions and relied on human input based on natural history knowledge to further narrow the variable...
Data on body condition and reproduction of Utah prairie dogs at 5 colonies on the Awapa Plateau, Utah, USA, June-August 2013-2016. Utah prairie dogs were live-trapped and sampled on 5 colonies. We recorded the age (juvenile/adult) and mass (nearest 5 grams) of each prairie dog and marked its ears and body with metal tags and passive integrated transponders, respectively, for permanent identification. We measured each prairie dog's right hind foot length (nearest millimeter). We indexed each adult prairie dog's body condition as the ratio between its mass and hind-foot length. Prairie dogs were allowed to recover from anesthesia and released at their trapping locations. We indexed prairie dog reproduction, by colony...
The data release details the samples, methods, and raw data used to generate high-quality genome assemblies for greater sage-grouse (Centrocercus urophasianus), white-tailed ptarmigan (Lagopus leucura), and trumpeter swan (Cygnus buccinator). The raw data have been deposited in the Sequence Read Archive (SRA) of the National Center for Biotechnology Information (NCBI), the authoritative repository for public biological sequence data, and are not included in this data release. Instead, the accessions that link to those data via the NCBI portal (www.ncbi.nlm.nih.gov) are provided herein. The release consists of a single file, sample.metadata.txt, which maps NCBI accessions to the samples sequenced and the different...
This data set includes the relative production scenarios for eight (8) grass species based on linear models from Epstein, et al. (1998). We selected two indicator species for each community: shortgrass prairie: blue grama (Bouteloua gracilis; BOGR) and buffalo grass (Bouteloua dactyloides; BODA); mixedgrass prairie: sideoats grama (Bouteloua curtipendula; BOCU) and little bluestem (Schizachyrium scoparium; SCSC); tallgrass prairie: big bluestem (Andropogon gerardii; ANGE) and Indiangrass (Sorghastrum nutans; SONU); and semiarid grasslands: black grama (Bouteloua eriopoda; BOER) and tobosagrass (Pleuraphis mutica; PLMU). Soil texture (percent by weight) came from the Earth Systems Science Center (2008) which provided...
This data set includes the relative production scenarios for bufflaograss [0.72(Temp) - 0.12(Precip) - 0.04(Sand) + 3.08]; this is the model from Epstein, et al. (1998). Soil texture (percent by weight) came from the Earth Systems Science Center (2008) which provided processed soils data from NRCS (gSSURGO), mean annual temperature (Celsius) and/or mean annual precipitation (millimeters) came from contemporary (1981 - 2010) estimates (Maurer et al. 2002) or a GCM. Global Climate Models (GCM) providing scenarios included: warmer-wetter scenario (CESM1-BGC, RCP4.5, Neale et al., 2010), warmer drier scenario (GISS-E2-R, RCP4.5, Schmidt, 2014), hotter-wetter scenario (Miroc-ESM, RCP8.5, Watanabe et al., 2011), and hotter-drier...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Colorado,
Great Plains Landscape Conservation Cooperative,
Kansas,
Nebraska,
New Mexico,
This data release comprises a dataset that contains sample collection information and microsatellite genotypes, and another dataset that contains single nucleotide polymorphism (SNP) genotypes with sample collection information for populations of white-tailed ptarmigan across the species' range. There is also an additional file (accession numbers.xlsx) linking samples to accession numbers in Genbank. This data was collected in order to address the following: The delineation of intraspecific units that are evolutionarily and demographically distinct is an important step in the development of species-specific management plans. Neutral genetic variation has served as the primary data source for delineating units for...
The Aga, also known as the Mariana Crow, is an endangered endemic crow of the Northern Mariana Islands, a Commonwealth of the United States of America. The only known population currently extant is on the island of Rota and has been in decline over the past two decades. Unknown pathogens are among the factors that may be contributing to this decline. To support metagenomic and transcriptomic analysis of potential disease agents, a reference genome was generated and gene features comprehensively annotated. The methods used and data availability are described. This data release consists of: 1. Gene annotations for the endangered Aga or Mariana Crow, including summary statistics, that are available from the National...
This dataset “Broad-scale assessment of biophysical features in Colorado: Soil salinity using electrical conductance” presents information extracted from the Natural Resources Conservation Service (NRCS) gridded surface soils geographic database (gSSURGO). Fields retained and presented here include map unit (MU) codes and component (COMP) codes that may be used to reference records in the original, NRCS, data. Soil salinity is typically measured and evaluated based on electrical conductance (EC), and values presented here include the representative value for the map unit component (ECR) and the highest estimated value (ECH). Soils with high salinity can affect the composition of vegetation and can limit production...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Colorado,
geoscientificInformation,
salinity,
soil chemistry,
soil sciences
The NABat sampling frame is a grid-based finite-area frame spanning Canada, the United States, and Mexico consisting of N total number of 10- by 10-km (100-km2) grid cell sample units for the continental United States, Canada, and Alaska and 5- by 5-km (25km2) for Hawaii and Puerto Rico. This grain size is biologically appropriate given the scale of movement of most bat species, which routinely travel many kilometers each night between roosts and foraging areas and along foraging routes. A Generalized Random-Tessellation Stratified (GRTS) Survey Design draw was added to the sample units from the raw sampling grids (https://doi.org/10.5066/P9M00P17). This sampling design produces an ordered list of units such that...
The rasters in this dataset represent modeled outputs of potential fire connectivity and relative flow patterns in the Great Basin. We define ‘fire connectivity’ as the landscape’s capacity to facilitate fire transmission from one point on the landscape to another. We applied an omnidirectional circuit theory algorithm (Omniscape) to model fire connectivity in the Great Basin of the western United States. We used predicted rates of fire spread to approximate conductance and calculated current densities to identify connections among areas with high spread rates. We calculated the cumulative current density as well as normalized cumulative current density, with the outputs included here as raster data.
Map of Brewer's sparrow density (birds/ha) in relation to vegetation, abiotic, and anthropogenic features. These data were released prior to the October 1, 2016 effective date for the USGS’s policy dictating the review, approval, and release of scientific data as referenced in USGS Survey Manual Chapter 502.8 Fundamental Science Practices: Review and Approval of Scientific Data for Release.
Probability map of Crested wheatgrass occurrence in relation to vegetation, abiotic, and anthropogenic features. These data were released prior to the October 1, 2016 effective date for the USGS’s policy dictating the review, approval, and release of scientific data as referenced in USGS Survey Manual Chapter 502.8 Fundamental Science Practices: Review and Approval of Scientific Data for Release.
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