Filters: Tags: {"scheme":"none"} (X) > partyWithName: Robert T Massatti (X)

Filters Date Range Past year (1) Past month (0) Past week (0) Past day (0) Custom range... To   Search Contacts Southwest Biological Science Center U.S. Geological Survey U.S. Geological Survey - ScienceBase Ecosystems Daniel E Winkler Robert K Shriver Matthew R Jones Tag Types Theme (27) Place (6) Tags (with Scheme=none) restoration (4) environmental gradients (3) native plant materials development (3) phylogeography (3) seed transfer guidelines (3) hilaria jamesii (2) intermountain west (2) More... View Results as: JSON ATOM CSV

Penstemon grahamii genetic data from a dryland region of the western United States These data were compiled to investigate the evolutionary history of Graham's beardtongue (Penstemon grahamii). Objective(s) of our study were to determine the evolutionary history of P. grahamii, including ancestral population sizes, the history of population divergences, and historical connectivity. In addition, we characterized population structure, genetic diversity summary statistics, and landscape factors influencing differentiation. These data represent anonymous loci sequenced from throughout the P. grahamii genome (specifically, .vcf and .structure files). Data in these files were manipulated to represent site frequency spectra between population pairs (.data files). These data were collected in 2019 from... Tags: Botany, Colorado, Ecology, Genetics, Geography, All tags... Information Sciences, Penstemon grahamii, USGS Science Data Catalog (SDC), Utah, adaptation, biogeography, biota, demographics, demography, ecosystem management, ecosystem restoration, environmental gradients, evolution, genetic diversity, native plant materials development, native species, phylogeny, phylogeography, population structure, restoration, seed transfer guidelines, Fewer tags 'Viva' native plant material data in support of restoration and conservation These data were compiled to investigate the evolutionary history of Hilaria jamesii, Hilaria mutica, and Hilaria rigida. The data release consists of two tab delimited text files that may be used to infer population structure (viva_structure.stru) or relationships among sampling localities (viva.phylip). Files record genetic variation on an individual (.stru) or sampling locality (.phylip) level. These files may be opened and edited in a text editor program, such as Notepad ++ (PC) or BBEdit (Mac). The .phylip file can be uploaded to phyML or SVDQuartets to generate a tree-based visualization of relationships ( http://www.atgc-montpellier.fr/phyml/ or https://paup.phylosolutions.com, repectively). The .stru file... Tags: Arizona, Botany, California, Colorado, Colorado Plateau, All tags... Ecology, Genetics, Geography, Great Basin, Hilaria jamesii, Hilaria mutica, Hilaria rigida, Information Sciences, Intermountain West, Kansas, Mojave Desert, Nevada, New Mexico, North America, Poaceae, Texas, USGS Science Data Catalog (SDC), Utah, Wyoming, adaptation, biogeography, biota, demographics, demography, ecosystem management, ecosystem management, ecosystem restoration, evolution, genetic diversity, genetics, hybridization, indigenous plants, native plant materials development, native species, phylogeny, phylogeography, population genetics, population structure, remediation, restoration, seed transfer guidelines, seeds, western United States, Fewer tags Population genetic and climatic variability data across western North America, 1915-2015 Environmental Analysis Data: These data were compiled to investigate the complex interactions between environmental gradients and geographic distance across the Intermountain West of the western United States. Due to complex topography, physiographic heterogeneity, and complicated relationships with large bodies of water, spatial autocorrelation of environmental similarity may be expected. We provide an R script (VarioAnalysis.R) that uses four associated data files (annualprecip.csv, annualSWA.csv, annualtemp.csv, key.csv) to reproduce Figure 3 in Massatti et al. 2020 (see Larger Work Citation). The data files contain information on yearly soil water availability, temperature, and precipitation, which are summed... Tags: Arizona, Botany, California, Climatology, Colorado, All tags... Colorado Plateau, Ecology, Genetics, Geography, Great Basin, Idaho, Information Sciences, Intermountain West, Iowa, Kansas, Louisiana, Missouri, Mojave Desert, Montana, Nebraska, Nevada, New Mexico, North America, North Dakota, Oklahoma, Oregon, Soil Sciences, South Dakota, Texas, USGS Science Data Catalog (SDC), Utah, Washington, Western United States, Wyoming, air temperature, biogeography, biota, botany, climate change, ecological processes, ecology, ecosystem restoration, environmental gradients, environmental similarity, geographic distance, native plant materials, native species, population dynamics, population genetics, precipitation, remediation, restoration, seed transfer zones, site-specific information, soil water availability, spatial analysis, spatial autocorrelation, spatial context, Fewer tags Hilaria jamesii data for the Colorado Plateau of the southwestern United States These data were compiled to investigate the demographic, phylogeographic, and adaptation history of Hilaria jamesii. The data release consists of three tab delimited text files that may be used to infer population structure or putative adaptive loci (hija_adaptation_dataset.stru), relationships among sampling localities (hija_phylogeny_dataset.phylip), or genetic diversity statistics (hija_diversity_stats.vcf). All files record genetic variation on an individual (.stru and .vcf) or sampling locality (.phylip) level. The .vcf file contains all of the information contained in the other files, but the file structures vary based on the programs used for analysis. These files may be opened and edited in a text editor... Tags: Arizona, Botany, Colorado, Colorado Plateau, Ecology, All tags... Genetics, Geography, Great Basin, Hilaria jamesii, Information Sciences, Intermountain West, Nevada, New Mexico, North America, Soil Sciences, USGS Science Data Catalog (SDC), Utah, Western United States, Wyoming, adaptation, biogeography, biota, demographics, demography, ecosystem management, ecosystem restoration, environmental gradients, evolution, genetic diversity, native plant materials development, native species, phylogeny, phylogeography, population structure, restoration, seed transfer guidelines, Fewer tags