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These data sets are is a compilation of bird and environmental samples obtained from 6 sites in Maricopa County, Arizona on the dates shown. Sites were only visited and sampled if they had Rosy-cheeked lovebirds coming to bird feeders at the location and with the permission of the property owner. Two swab samples were obtained from each captured bird and 3 swab samples were collected from the environment at each site. Each sample was tested by PCR for Chlamydia psittaci, Psittacine Circovirus genotype 1 [PCV-1]), and Psittacine Circovirus genotype 2 (PCV-2) and, for appropriate samples (love birds and environmental samples) and where enough sample material remained for PBFD virus Pathotype 2.
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This dataset uses the ITIS recommended Ortmanniana pectorosa, Conrad, 1834 in place of Actinonaias pectorosa, which was used in the Richard et al. 2020 manuscript. Biologists monitoring freshwater mussel (Order Unionida) populations rely on behavioral, often subjective, symptoms to identify “sick” or stressed animals, such as gaping valves and slow response to probing and lack clinical indicators to support a diagnosis. As part of a multi-year study to investigate causes of reoccurring mortality of pheasantshell (Ortmanniana pectorosa, Conrad 1834) in the Clinch River, Virginia and Tennessee, USA, we analyzed the hemolymph metabolome of a subset of mussels from the 2018 sampling period. Mussels at the mortality...
During 2002−2015 we examined the causes of mortality in beachcast northern sea otters (Enhydra lutris kenyoni) collected from the coasts of Washington and Oregon states. A total of 333 moribund or dead sea otters were reported through opportunistic observations and 93 otter carcasses were collected for necropsy. Retrieved carcasses received a full diagnostic evaluation to determine cause of death when carcass condition permitted. Otter stranding reports were received from the entire Washington coast and northern Oregon coast, but carcasses located near areas populated by humans were most often in suitable condition for cause of death determination. Data in this release include basic demographic information on the...
We reviewed pathological findings and to a lesser extent epidemiological data from 70 free-ranging columbiforms naturally infected with Pigeon paramyxovirus-1 (PPMV-1) from 25 different PPMV-1 mortality events in columbiforms in the USA. In a subset of 17 birds from 10 of the studied outbreaks, we carried out immunohistochemistry targeting PPMV-1 nucleoprotein to determine the tissue distribution of the virus.
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The emergence of ophidiomycosis (or snake fungal disease) in snakes has prompted increased awareness of the potential impacts of fungal infections on wild reptile populations. Yet, aside from Ophidiomyces ophidiicola, little is known about other mycoses affecting wild reptiles. The closely related genus Paranannizziopsis has been associated with dermatomycosis in snakes and tuataras in captive collections and P. australasiensis was recently identified as the cause of skin infections in non-native wild panther chameleons (Furcifer pardalis) in Florida, USA. Here we describe five cases of Paranannizziopsis spp. associated with skin lesions in wild snakes in North America and one additional case from a captive snake...
As harmful algal blooms (HABs) increase in magnitude and duration worldwide, they are becoming an expanding threat to marine wildlife. Over the past decade, domoic acid (DA) and saxitoxin (STX) have been increasingly problematic bicoastally in the United States. We investigated pooled seabird mortality data from opportunistic sampling events between 2007-2018, across three states, to examine the patterns and role of DA and STX in seabird mortality events from the continental United States. Patterns in DA and STX levels and affected tissue type were reviewed, and two specific accounts of localized and pervasive event types were examined. There has been increased toxin detection with expanded tissue testing during...
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We experimentally challenged wild Mexican free-tailed bats (TABR) with SARS-CoV-2 to determine the susceptibility, reservoir potential, and population impacts of infection in this species. Of nine bats oronasally inoculated with SARS-CoV-2, five became infected and orally excreted moderate amounts of virus for up to 18 days post inoculation. These five subjects all seroconverted and cleared the virus before the end of the study with no obvious clinical signs of disease. We additionally found no evidence of viral transmission to uninoculated subjects. These results indicate that while TABR are susceptible to SARS-CoV-2 infection, infection of wild populations of TABR would not likely cause mortality.
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Freshwater mussels of the order Unionida are among the most endangered animal groups globally, but the causes of population declines are often enigmatic with little known about the role of disease. In 2018, we collected wild adult pheasantshell (Actinonaias pectorosa) and mucket (Actinonaias ligamentina) during an epidemiologic survey investigating an ongoing mussel mass mortality event in the Clinch River, USA. Histopathology and transmission electron microscopy showed a novel microsporidian parasite primarily infecting the ovary of pheasantshell. Sequencing of the small subunit rRNA gene produced a 1333 bp sequence with greatest similarity to Pseudonosema cristatellae (AF484694.1; 86.36%; e-value = 0), a microsporidium...
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Comprehensive list of carcasses detected at Haul Trail in Bayou Sauvage National Wildlife Refuge (Orleans Parish, LA) and relevant findings for specimens subject to postmortem examination at the USGS National Wildlife Health Center (Madison, WI).
Morbillivirus epidemics in marine mammals first gained prominence in 1988 when an outbreak of phocine distemper virus (PDV) occurred in European harbor seals (Phoca vitulina vitulina). Prior to 2001, all serosurveys for morbilliviruses in sea otters (Enhydra lutris) in California, Washington and Alaska documented a 0% seroprevalence. The first published serodetections of morbillivirus in sea otters occurred in 2001–2002 in live-captured Washington sea otters with a documented 80% seroprevalence. We conducted a retrospective study of sea otter cases from 1989–2010 compiled at the U.S. Geological Survey’s National Wildlife Health Center to identify cases of morbilliviral disease in Washington sea otters, and to characterize...
Rabbit hemorrhagic disease, a notifiable foreign animal disease in the USA, was reported for the first time in wild native North American rabbits and hares in April 2020 in the southwestern USA. Affected species included the Desert Cottontail (Sylvilagus audubonii), Mountain Cottontail (S. nutallii), Black-tailed Jackrabbit (Lepus californicus), and Antelope Jackrabbit (L. alleni). Desert Cottontails (n=7) and Black-tailed Jackrabbits (n=7) collected in April and May 2020 were necropsied at the U.S. Geological Survey National Wildlife Health Center (NWHC) and tested positive for Lagovirus europaeus GI.2, also known as rabbit hemorrhagic disease virus 2 (GI.2/RHDV2/b), by real-time PCR at the U.S. Department of Agriculture’s...
    map background search result map search result map Mortality trends in northern sea otters (Enhydra lutris kenyoni) collected from the coast of Washington and Oregon during 2002—2015: Data Occurrence of Chlamydia sp in apparently healthy birds associated with a mortality event caused by chlamydiosis: Data Domoic acid and saxitoxin in seabirds from California and Rhode Island 2015-2017 Bayou Sauvage NWR (LA) Haul Trail Snake Mortality, 2015-2017 Data from pathology of Lagovirus europaeus GI.2/RHDV2/b (rabbit hemorrhagic disease virus 2) in native North American lagomorphs A Novel Gonadotropic Microsporidian Parasite (Microsporidium clinchi n. sp.) Infecting a Declining Population of Pheasantshell Mussels (Actinonaias pectorosa) (Unioinidae) from the Clinch River, USA Experimental infection of Mexican free-tailed bats (Tadarida brasiliensis) with SARS-CoV-2 Metabolomic analysis of pheasantshell mussel (Ortmanniana pectorosa; Order Unionida) from a mass mortality event in the Clinch River, Virginia and Tennessee, USA Paranannizziopsis spp. associated with skin lesions in wild snakes in North America and development of a real-time PCR assay for rapid detection of the fungus in clinical samples Experimental infection of Mexican free-tailed bats (Tadarida brasiliensis) with SARS-CoV-2 Bayou Sauvage NWR (LA) Haul Trail Snake Mortality, 2015-2017 Occurrence of Chlamydia sp in apparently healthy birds associated with a mortality event caused by chlamydiosis: Data A Novel Gonadotropic Microsporidian Parasite (Microsporidium clinchi n. sp.) Infecting a Declining Population of Pheasantshell Mussels (Actinonaias pectorosa) (Unioinidae) from the Clinch River, USA Mortality trends in northern sea otters (Enhydra lutris kenyoni) collected from the coast of Washington and Oregon during 2002—2015: Data Data from pathology of Lagovirus europaeus GI.2/RHDV2/b (rabbit hemorrhagic disease virus 2) in native North American lagomorphs Domoic acid and saxitoxin in seabirds from California and Rhode Island 2015-2017 Paranannizziopsis spp. associated with skin lesions in wild snakes in North America and development of a real-time PCR assay for rapid detection of the fungus in clinical samples