Filters: Tags: {"type":"USGS Scientific Topic Keyword","name":"water quality"} (X) > Date Range: {"choice":"year"} (X) > Tags: {"type":"USGS Scientific Topic Keyword","name":"aquatic biology"} (X) > Categories: Data (X)
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The Stream Conditions of Chester County Biological Monitoring Network was established by the U.S. Geological Survey and the Chester County Water Resources Authority in 1969. Benthic-macroinvertebrate, habitat, and stream chemistry data were collected annually from 1998-2021 at 18 fixed location sites. Additionally, nine flexible location sites were selected and sampled annually from 1998-2021. Some of the flexible location sites were sampled more than once over the study period. All data were collected in the fall months (October-November) during baseflow conditions. The benthic-macroinvertebrate data collected was used to calculate six metrics and to establish an index of biotic integrity for each sample, while...
A total of 27 temperature sensors were deployed along the lower 90 miles of the Yakima River at 7 locations where cold water had been previously observed. These 7 cold-water areas had 3 to 6 temperature sensors installed to document the extent and duration of these cold-water areas and their impacts on mainstem temperatures of the Lower Yakima River. Cold-water areas included the mouths of tributaries, alongside channels, and within alcoves. Sensor deployments ranged from 1 to 2 years beginning in October 2018. All temperature data are included in the Yakima.temperatures.zip folder. Details of each monitoring location are provided in the site.locs.csv file. In addition to the raw data and site location information,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Benton County,
Ecology,
Hydrology,
Richland, WA,
Comma-separated values (.csv) file containing data related to mercury concentrations in dragonfly samples from U.S. National Parks collected as part of the Dragonfly Mercury Project (DMP). This data release supersedes Eagles-Smith, C.A., Nelson, S.J., Flanagan-Pritz, C.M., Willacker Jr., J.J., and Klemmer, A.J., 2018, Total mercury concentrations in dragonfly larvae from U.S. national parks (ver. 8.0, December 2022): U.S. Geological Survey data release, https://doi.org/10.5066/P9TK6NPT. Please contact fresc_outreach@usgs.gov for access.
This dataset contains taxonomy, density (cells/mL), and biovolume (μm3/mL) data for phytoplankton sampled across the Sacramento San Joaquin River Delta and San Francisco Bay (Bay-Delta) beginning in 2016. Whole water phytoplankton samples were collected intermittently during special projects and during routine visits to service continuous monitoring stations. Samples were preserved with Lugol’s iodine solution (2-5 %) immediately after collection and stored in a cool, dark environment until analysis. Preserved whole water samples are sent to BSA Environmental Services (BSA) in Beachwood, Ohio for microscopic identification and enumeration. A Leica DMLB compound microscope is used for enumerating filtered phytoplankton...
Between 1900 and 1932, a copper (Cu) mine operated near Gay, Michigan, along the shore of Lake Superior, discharged approximately 22.8 million metric tons of waste material known as ‘stamp sands’ (SS) to a nearby beach. This pile of SS has migrated via wind and rain along the beaches in northern Grand Traverse Bay and into Buffalo Reef, an important spawning area for Lake Trout and Lake Whitefish. During their first summer, these newly spawned fish consume benthic invertebrates and zooplankton in nearby beach habitats. SS contain elevated concentrations of metals (especially Cu) that are toxic to many invertebrate taxa, and studies have observed very few benthic taxa in areas with very high SS. Here, we sampled...
Categories: Data;
Tags: Aquatic Biology,
Keweenaw Bay NE,
Lake Superior,
Michigan,
Southcentral Lake Superior,
Freshwater fish are among the most vulnerable taxa to climate change globally but are generally understudied in tropical island ecosystems. Climate change is predicted to alter the intensity, frequency, and variability of extreme flow events on the Caribbean island of Puerto Rico. These changes may impact Caribbean native and non-native stream ecosystems and biota complex ways. We compiled an extensive dataset of native and non-native fish assemblages collected at 119 sites across Puerto Rico from 2005 to 2015. We coupled these data with stream flow indices and dam height to understand how flow dynamics drive fish assemblage structure. Sixteen percent of sites contained exclusively non-native species, 34% contained...
Categories: Data,
Publication;
Types: Citation;
Tags: Aquatic Biology,
Caribbean,
Caribbean ecosystems,
Hydrology,
USGS Science Data Catalog (SDC),
The dataset documents the spatial and temporal variability of nutrients, phytoplankton, and related water quality parameters at high spatial resolution in the Sacramento-San Joaquin River Delta and Suisun Bay of California, USA. The dataset includes nitrate, ammonium, orthophosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, and chlorophyll as well as information about phytoplankton community composition. Data were collected under different environmental/flow conditions in June, July, August, and October of 2020, and May, July, and October of 2021. The data release consists of a .xml document, and .txt and shapefile documents. Descriptions for each document and file are listed in the...
Water quality and fish tissue samples were collected and measured for mercury concentrations in a total of 23 small to medium size lakes in Minnesota to assess the impact that zebra mussel (Dreissena polymorpha) invasion had on mercury bioaccumulation. Water samples were collected in October and November of 2021 from 22 lakes and analyzed for total mercury, methylmercury, dissolved organic carbon, and suspended particulate matter at the U.S. Geological Survey (USGS) Mercury Research Laboratory (MRL). Tissue samples of walleye (Sander vitreus) and yellow perch (Perca flavescens) were collected by researchers at the University of Minnesota, Twin Cities from July to October in 2019 and 2021 and June to October in 2020...
Categories: Data;
Tags: Aquatic Biology,
Environmental Health,
Minnesota,
USGS Science Data Catalog (SDC),
Water Quality,
IMPORTANT NOTE: More recent versions of these data release are available at this link. This dataset includes spatial locations where streamflow permanence observations (continuous flow, discontinuous flow, and dry) were recorded using the FLOwPER (FLOw PERmanence) field survey available in the Survey 123 and S1 mobile application. Additional information to describe the field conditions are included as part of the survey. Field observations in the FLOwPER Database have not been processed for quality control including spatial data accuracy or association with a stream network such as the National Hydrography Dataset. Streamflow permanence observations are collected from several governmental and non-governmental organizations...
This dataset provides the estimated cell abundance and total biovolume for whole-water picoplankton samples collected by the U.S. Geological Survey (USGS) at 25 different sites in Kansas between August of 2020 and August of 2022. The samples were analyzed by BSA Environmental Services, Inc. This data is part of a larger multi-agency project between U.S. Environmental Protection Agency, National Aeronautics and Space Administration, National Oceanic and Atmospheric Administration, and USGS called the Cyanobacteria Assessment Network (CyAN). The goal of the CyAN project is to develop a satellite-based, early warning system to detect harmful algal blooms (HABs) in freshwater systems.
This dataset records Cladophora and associated benthic algae, collectively Cladophora community or submerged aquatic vegetation (SAV), biomass collected during the growing season of 2021 at stations located along the U.S. shoreline of Lakes Michigan, Huron, Erie, and Ontario. It also records a variety of supporting data collected at Cladophora measurement stations. These supporting data include: - seasonal time series of light, currents, wave action, temperature, specific conductivity, turbidity, pH, phycocyanin, chlorophyll, and dissolved oxygen from moored sensors at a subset of stations; - measurements of Secchi disk depth and water chemistry; - water column profiles of PAR, temperature, specific conductivity,...
Comma-separated values (.csv) file containing data related to amphibian sampling across the United States between 2016 and 2021. Data files contain mercury concentrations in amphibian and dragonfly tissues, mercury concentrations in sediment, as well as amphibian morphometrics, and habitat and climate characteristics where the samples were collected.
This data release contains cyanotoxin concentrations for microcystins, cylindrospermopsins, anatoxins, and saxitoxins assessed using Enzyme-Linked Immunosorbent Assays (ELISA) on 363 samples collected from 82 surface-water sites located in the Cascade Range in Oregon, and eight sites located outside of the Oregon Cascade Range in Washington and California, during 2016-2020. Three sample types were assessed: 1) benthic colonies and mats of cyanobacteria (n=109), 2) plankton net tows (n=90), and 3) Solid Phase Adsorption Toxin Tracking samplers (SPATTs)(n=164).
Categories: Data;
Tags: Anderson Lake,
Aquatic Biology,
California,
Clackamas River,
Coast Fork Willamette River,
Malheur Lake is a shallow, freshwater lake in southeastern Oregon. This data release includes phytoplankton data from three sites located in Malheur Lake collected from 8/8/2018 to 8/11/2020. For each sample collected, the phytoplankton were reported to the lowest taxonomic unit. Phytoplankton biovolume, algal cell concentration, and algal biomass concentration are included. All phytoplankton data were generated by PhycoTech, Inc. The dataset includes two comma-separated values (.csv) files and metadata. The first CSV file includes all of the taxonomic, biovolume, and density information. The second CSV file includes the 111 unique taxa identified.
This dataset includes georeferenced, high-resolution, airborne thermal infrared (TIR) and high-resolution true-color imagery, a polyline shapefile of the channel centerline, a polyline shapefile with TIR sample points for longitudinal stream temperature profiles, and a tabular file with longitudinal stream temperature profiles for the Donner und Blitzen River and its tributaries, Oregon. The aerial TIR surveys were conducted with a helicopter by NV5 Geospatial and are published as 17 raster mosaics in GeoTiff format with a resolution of 0.3 meters (m). The TIR mosaics contain corrected surface temperatures in degrees Celsius (C) (multiplied by 10 to create an unsigned integer pixel type). The longitudinal stream...
Categories: Data;
Tags: Aquatic Biology,
Donner und Blitzen River,
Geomorphology,
Harney County,
Hydrology,
In 2015-2018, the U.S. Geological Survey (USGS) in cooperation with the U.S. Environmental Protection Agency Great Lakes Restoration Initiative investigated the biodegradation of microcystins in source waters and sand filters from drinking-water plants in the Western Lake Erie Basin. Four source waters and three sand filtrate samples were collected from the intakes and sand filters of Lake Erie drinking-water plants and transported to the USGS Ohio Water Microbiology Laboratory, where investigators set up microcosms to enrich for and identify indigenous bacteria capable of degrading microcystins. Quality control samples were set up in the microcosms to check analyses and included positive controls, negative controls,...
This dataset includes field hydrologic measurements and laboratory analyses of surface and pore waters, sediments, benthic plants/biofilms, and biota along the Middle Snake River upgradient of the Hells Canyon Complex. The study region for this work focuses on a section of the Snake River heavily utilized for agriculture, with complex systems of irrigation diversion and return drainage, spanning 164 km above the Hells Canyon Complex (Idaho, Oregon). The goal of this study was to identify potential loading sources of methylmercury from the upgradient Snake River into the reservoir complex, with a focus on the tributaries, irrigation return drains, and riparian zones adjacent to agricultural lands along the river....
The Grand Calumet River flows through northwestern Indiana and was designated an EPA Area of Concern (AOC) in 1987. There are multiple legacy pollutants in the river including but not limited to heavy metals and PCBs. To investigate potential causes and patterns of eutrophication in the river, water samples were collected for 16S rRNA microbial and eukaryotic 18S rRNA amplicon sequencing during April - September 2021. This data release describes the resulting sequencing data.
Categories: Data;
Tags: Aquatic Biology,
DNA Sequencing,
Environmental Health,
Environmental Health,
Eukaryotic 18S metabarcoding,
Note: This data release has been superseded by version 2.0, available here: https://doi.org/10.5066/P968UDS7. This U.S. Geological Survey (USGS) data release provides zooplankton data collected from Cheney Reservoir, Kansas, during October 2008 through July 2021. All data are reported as raw calculated values and are not rounded to USGS significant figures. This data release was produced in compliance with the open data requirements as a way to make scientific products associated with USGS research efforts and publications available to the public. The dataset includes all routine and quality assurance/quality control samples collected at the long-term sampling site on Cheney Reservoir located near the dam (USGS...
These tabular data are summaries of human related landscape variables within catchments of the Chesapeake Bay watershed using the Xstrm methodology at 1:24,000 scale. Variables being counted as human related include agriculture, barriers, road density and road/stream crossing data. Outputs consist of tabular comma-separated values files (CSVs) for both local catchment and network summaries linked to the National Hydrography Dataset Plus High-Resolution (NHDPlus HR) framework by NHDPlus ID. Local catchments are defined as the single catchment the data is summarized within. Network accumulation summaries were completed for each of the local catchments and their network connected upstream and/or downstream catchments....
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