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This dataset consists of one table with annual counts from population plots of Black-legged Kittiwakes and Common Murres at two seabird nesting colonies on Gull and Chisik Islands in lower Cook Inlet, Alaska.
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Fragment data from 11 nuclear microsatellite loci and sequence data from the mitochondrial cytochrome b gene were gathered from Arctic cod (Boreogadus saida) in the Beaufort and Chukchi seas. Mitogenomic analyses of Arctic cod and three other co-distributed gadoids (Polar cod [Arctogadus glacialis], Saffron cod [Eleginus gracilis], Walleye Pollock [Gadus chalcogrammus]) were also completed. Transcriptomic analyses of Arctic cod were used to identify genes associated with environmental perturbations. Genome-wide scans using RAD-Seq of Arctic cod and the co-distributed Polar Cod were collected.
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These data are part of the Gulf Watch Alaska (GWA) long term monitoring program, nearshore monitoring component. Specifically, these data describe sea otter (Enhydra lutris) aerial survey observations from the waters around Katmai National Park and Preserve from surveys conducted in 2008, 2012, 2015, and 2018. Sea otters are a keystone predator, well known for structuring the nearshore marine ecosystem through their consumption of invertebrate prey. The dataset consists of 3 comma-delimited files (CSV) exported from Microsoft Excel. The data consists of (1) Strip transect counts, (2) Intensive Search Unit (ISU) counts, and (3) Transect coordinates. For each aerial survey, a pilot flew an airplane at an altitude...
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This data package includes 2 child items with data from Pacific Black Brant (Branta bernicla nigricans) during winter and migration periods. Child Item 1: "Body mass, Morphological Measurements, Flock Counts, and Age-Ratios from Black Brant Overwintering in Three Lagoons Along the Baja California Peninsula, Mexico". The data include: (1) body mass and morphological measurements from sport hunter harvested brant, and (2) census counts of brant in Bahia de San Quintin, (3) counts for flock age ratio determination, and (4) behavior. Child Item 2: "Black Brant (Branta bernicla nigricans) Radio Detection and Migration Timing Alaska to Mexico". Data from brant tagged with VHF radio transmitters in July 1999 on the Yukon...
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This data release includes Lake Ontario prey fish data including species captured, relative abundance, spatial distribution, size structure, and age data from the April or spring prey fish bottom trawl survey, 1978 through 2024. Data from 1978 - 2015 are from U.S. waters of Lake Ontario while data from 2016 - 2024 include both U.S. and Canadian waters of Lake Ontario. Details about the vessel and gear descriptions, sampling protocols, and catch processing protocols are provided in the associated metadata.
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This data set contains sampling information, allele sizes of 11 microsatellite loci, and Genbank accession numbers of ddRAD seq results for scoters (Melanitta sp.). Microsatellite data is provided for three North American species of scoter (black scoter, M. americana n = 61; white-winged scoter, M. deglandi, n = 208; surf scoter, M. perspicillata, n = 145) and their European congeners (common scoter, M. nigra, n = 19; velvet scoter, M. fusca, n = 20). Individuals with ddRAD results include 27 black scoters, 4 common scoters, 32 surf scoters, 28 white-winged scoters, and 4 velvet scoters.
Categories: Data; Tags: Alaska, Alleles, Animals/Vertebrates, Baja California, Biota, All tags...
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Climate change vulnerability assessments are commonly used to identify species or populations at risk from global climate change, but few translate impact assessments to climate change adaptation actions. Furthermore, most climate change adaptation efforts emphasize where to implement management actions, whereas timing remains largely overlooked. The rate of modern climate change introduces urgency in evaluating whether delaying conservation actions compromises their efficacy for reaching important conservation targets. We evaluated the importance of multiple climate change adaptation strategies including timing of actions on preventing extinctions for a threatened climate-sensitive species, the Eastern Massasauga...
Snowshoe hare populations fluctuate over a period of several years and are thought to send the cats on migration routes in what’s known as the “travelling wave” theory. In a changing boreal region, scientists want to know where and how lynx move across the landscape to better understand how the larger system is connected.Researchers will build on on-going research in national wildlife refuges by placing satellite tracking collars on cats to better understand the dynamics across the region. Isotypes in the cats’ teeth as well as genetic markers give more clues about lynx movement. This project involves collaboration with local trappers.The project is a collaboration among the University of Alaska Fairbanks, Yukon...
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Of the vital rates that determine recruitment, breeding propensity (i.e., the proportion of females that lay at least one egg) and nest success appear to have the greatest influence, but breeding propensity remains poorly studied. The few studies that have been conducted reveal it to be highly variable among years (15–77%), likely in response to environmental conditions (e.g., precipitation and wetland availability), and lower than estimates from other dabbling ducks. Thus, quantifying breeding propensity across the mottled duck range in the WGC and identifying factors responsible for its variation remain high priorities for future investigation. Breeding propensity is also among the most difficult vital rates to...
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A study comparing reintroduction scenarios for the San Francisco gartersnake (Thamnophis sirtalis tetrataenia), an endangered subspecies native to San Mateo County and Santa Cruz County in northern California. Models for snake survival, growth, fecundity, and reproductive status were used to construct a demographic population model. Data are posterior distributions for demographic parameters from Markov Chain Monte Carlo sampling in hierarchical Bayesian models. These data support the following publication: Rose, J.P., Kim, R., Schoening, E.J., Lien, P.C., and Halstead, B.J., 2023. Comparing reintroduction strategies for the endangered San Francisco gartersnake (Thamnophis sirtalis tetrataenia) using demographic...
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This dataset includes tables summarizing image information and bird counts from the aerial digital images taken over open water at Izembek Lagoon in Alaska in fall 2017-2019. These summaries list one record per image and provide the camera parameters, latitude, longitude, altitude, and automated and manual counts representing the total number of birds in each taxon (brant, white-cheeked geese, emperor geese, gulls, and other birds) identified in the image. The original images (.JPG format) and annotations are provided in an accompanying USGS data release (Weiser et al. 2022).
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This dataset contains sampling information and genetic data of 12 novel microsatellite loci developed and polymorphic in the Sea Sandwort (Honckenya peploides) and screened in Merckia (Wilhelmsia physodes) from Alaska. The allele sizes for the 12 microsatellite loci developed in this study are included for two populations of Sea Sandwort (Fossil Beach, Kodiak and Egg Bay, Atka) and one population of Merckia (upper Coleen River, Brooks Range).
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Assessing the distribution and abundance of both predator and prey (forage) fish species is a cornerstone of ecosystem-based fishery management and supports decision making that considers food-web interactions. In support of binational Great Lakes fishery management, the objectives of this survey were to: provide estimates of densities of key forage and predator species in the western basin of Lake Erie, to assess seasonal and spatial distributions of fishes in tandem with water quality information, and to assess year class strength. A systematic grid sampling approach with 41 stations was sampled via bottom trawl during June (Spring) and September (Autumn), starting in 2013. This data release adds 2023 data to...
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The imagery and annotations presented here were generated while testing an aerial photographic survey design to improve repeatability, transparency, and estimation of variance for annual population estimates of geese staging at Izembek Lagoon, Alaska. This dataset includes 1) 131,031 .JPG images captured from a small fixed-wing occupied aircraft, usually at an altitude of about 457 m, over Izembek Lagoon; 2) annotations of objects (geese, ducks, and gulls) assigned by an automated algorithm, and 3) manually corrected annotations that were edited by project staff for only those photos automatically identified as containing geese of any species. The photos were captured at predetermined points to systematically sample...
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This is a child item of the USGS Data Release: https://doi.org/10.5066/F7T43R88 This data package provides data from Pacific Black Brant (Branta bernicla nigricans) tagged with VHF radio transmitters in July 1999 on the Yukon Kuskokwim Delta, Alaska and detected in the following two years during their annual migration. Data include: 1) one table with attributes of the tagged brant, 2) one table with estimated dates of migration events, and 3) seven tables of detection data from radio tracking scans at coastal sites between Alaska and Mexico. Version History: First release: April 2023 Revised: February 2024 (ver. 2.0)
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Twenty-three long-term mangrove vegetation plots were established between 1992-1997 within the southwest coastal region of Everglades National Park (Florida, USA) to quantify tree damage and recovery following hurricanes and to understand the effects of global climate change. Many of the mangrove vegetation plots were associated with hydrology, soil porewater, and soil surface elevation monitoring stations. Within each plot, trees were tagged, mapped, and identified to species. The diameter at breast height (DBH) and status of each tree were measured at one to two year intervals through 2011. This dataset includes 51,730 tree measurements.
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This dataset consists of three tables related to abundance and distribution of northern sea otters (Enhydra lutris kenyoni) in lower Cook Inlet and the outer Kenai Peninsula, Alaska, based on data collected during a series of aerial surveys from May-Aug 2002. The dataset consists of: (1) sea otter counts along strip transects, (2) sea otter counts in Intensive Search Unit (ISU) within the transects, and (3) transect coordinates. **NOTE: 2002 data from survey sections in Kenai Fjords National Park are also included in another USGS data release available at https://doi.org/10.5066/F7CJ8BN7
Snowshoe hare populations fluctuate over a period of several years and are thought to send the cats on migration routes in what’s known as the “travelling wave” theory. In a changing boreal region, scientists want to know where and how lynx move across the landscape to better understand how the larger system is connected.Researchers will build on on-going research in national wildlife refuges by placing satellite tracking collars on cats to better understand the dynamics across the region. Isotypes in the cats’ teeth as well as genetic markers give more clues about lynx movement. This project involves collaboration with local trappers.The project is a collaboration among the University of Alaska Fairbanks, Yukon...
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This data set contains allele sizes for 8 previously published and 16 novel microsatellite loci, and one microsatellite redesigned for amplification in Merlins (Falco columarius) associated with circadian clock control and polymorphism that has been associated with juvenile dispersal and migratory behavior in some avian species for Merlin (Falco columbarius) from North America (n=21). Allele sizes for the 16 microsatellite loci developed in this study are included for 12 Gyrfalcons (F. rusticolus) and 13 Peregrine Falcons (F. peregrinus). Additional population level data for Merlins and mtDNA will be added to this data release in the future.


map background search result map search result map Using light-level geolocators to measure breeding propensity of mottled ducks in the Western Gulf Coast Gulf Watch Alaska Nearshore Component: Sea Otter Aerial Survey Data Katmai National Park and Preserve, 2008-2018 Microsatellite Genetic Data for Sea Sandwort (Honckenya peploides) and Merckia (Wilhelmsia physodes), Alaska, 2009-2016 Publication: Delaying conservation actions matters for species vulnerable to climate change Genetic Data from Arctic, Polar, and Saffron Cod and Walleye Pollock, Alaska and Canada, 2011-2017 Scoter (Melanitta sp.) ddRAD SNP and Microsatellite Genetic Data, North America and Europe, 1977-2012 Genetic Data for Merlin (Falco columbarius) and Cross-Species Microsatellite Amplification in Select Falco Species, North America Aerial Photo Imagery from Fall Waterfowl Surveys, Izembek Lagoon, Alaska, 2017-2019 Data from Black Brant (Branta bernicla nigricans) Overwintering in Three Lagoons Along the Baja California Peninsula, Mexico Demographic Parameter Estimates for San Francisco Gartersnakes (Thamnophis sirtalis tetrataenia) for Fitting an Integral Projection Model Lake Erie Fish Community Data, 2013-2023 Everglades mangrove vegetation data from 23 long-term plots (1992-2011) Nesting Productivity of Black-Legged Kittiwakes and Common Murres at Two Seabird Colonies in Lower Cook Inlet, Alaska Population Plots at Two Seabird Colonies in Lower Cook Inlet, Alaska Child Item 2: Black Brant (Branta bernicla nigricans) Radio Detection and Migration Timing Alaska to Mexico Lake Ontario April Prey Fish Bottom Trawl Survey, 1978-2024 Sea Otter Aerial Survey Data from Lower Cook Inlet and the Outer Kenai Peninsula, Alaska, 2002 Counts of Birds in Aerial Photos from Fall Waterfowl Surveys, Izembek Lagoon, Alaska, 2017-2019 Everglades mangrove vegetation data from 23 long-term plots (1992-2011) Aerial Photo Imagery from Fall Waterfowl Surveys, Izembek Lagoon, Alaska, 2017-2019 Counts of Birds in Aerial Photos from Fall Waterfowl Surveys, Izembek Lagoon, Alaska, 2017-2019 Nesting Productivity of Black-Legged Kittiwakes and Common Murres at Two Seabird Colonies in Lower Cook Inlet, Alaska Population Plots at Two Seabird Colonies in Lower Cook Inlet, Alaska Lake Erie Fish Community Data, 2013-2023 Gulf Watch Alaska Nearshore Component: Sea Otter Aerial Survey Data Katmai National Park and Preserve, 2008-2018 Lake Ontario April Prey Fish Bottom Trawl Survey, 1978-2024 Sea Otter Aerial Survey Data from Lower Cook Inlet and the Outer Kenai Peninsula, Alaska, 2002 Using light-level geolocators to measure breeding propensity of mottled ducks in the Western Gulf Coast Publication: Delaying conservation actions matters for species vulnerable to climate change Data from Black Brant (Branta bernicla nigricans) Overwintering in Three Lagoons Along the Baja California Peninsula, Mexico Child Item 2: Black Brant (Branta bernicla nigricans) Radio Detection and Migration Timing Alaska to Mexico Genetic Data for Merlin (Falco columbarius) and Cross-Species Microsatellite Amplification in Select Falco Species, North America Genetic Data from Arctic, Polar, and Saffron Cod and Walleye Pollock, Alaska and Canada, 2011-2017 Microsatellite Genetic Data for Sea Sandwort (Honckenya peploides) and Merckia (Wilhelmsia physodes), Alaska, 2009-2016 Scoter (Melanitta sp.) ddRAD SNP and Microsatellite Genetic Data, North America and Europe, 1977-2012