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This data release links benthic macroinvertebrate sites to both the NHDPlus Version 2 and NHDPlus High Resolution Region 02 networks, hereafter referred to as V2 and HR, using the hydrolink methodology. Linked benthic macroinvertebrate sites are those included in the Chesapeake Bay Basin-wide Index of Biotic Integrity (Chessie BIBI) developed by the Interstate Commission on the Potomac River Basin (ICPRB) and available from the Chesapeake Bay Program (https://datahub.chesapeakebay.net/LivingResources). The data set contains a unique sample identifier created by ICPRB, survey program, coordinates of sample, linked V2 COMID and HR Permanent Identifier, and information regarding uncertainty in the attribution. We strongly...
Categories: Data;
Tags: Aquatic Biology,
District of Columbia (national district),
Ecology,
Hydrology,
Maryland (state),
These data were compiled to create models that estimate entrainment rates and population growth rates of smallmouth bass below Glen Canyon Dam. Objective(s) of our study were to predict smallmouth bass entrainment rates and population growth under different future scenarios of Lake Powell elevations and management. These data represent parameters needed for associated models and data needed to produce figures. These data were collected from publicly available online sources including published papers and federal government datasets. These data were assembled by researchers from U.S. Geological Survey, Utah State University, Colorado State University, U.S. Fish and Wildlife Service. These data can be used to run...
This data release includes physical and chemical characteristics of field collected sediment and soil samples in Missouri representing potential sediment/soil that may enter the water column during construction related activities. Three samples were collected, including Spring River sediment, Osage River bank soil and Columbia crushed limestone. The impacts of increased suspended solid level due to the three samples on early-stage freshwater mussels were examined using three freshwater mussel species, including Fatmucket (Lampsilis siliquoidea), Arkansas Brokenray (Lampsilis reeveiana), and Washboard (Megalonaias nervosa). Specifically, toxicity endpoints including survival, biomass, and growth of juveniles were...
Categories: Data;
Tags: Acute toxicity,
Aquatic Biology,
Boone County,
Chronic toxicity,
Osage River,
These data were compiled for/to modeling efforts for U.S. Bureau of Reclamation National Environmental Policy Act (NEPA) analyses for the Colorado River in Grand Canyon, Arizona. Objective(s) of our study were to create revised monthly Lake Powell elevations and outflows from Bureau of Reclamation Colorado River Mid-term Modeling System (CRMMS) traces that incorporate the alternatives in the sEIS documents and indicate when potential actions may occur and how that changes water movement and storage. These data represent monthly hydrologies for Lake Powell: inflow, outflow, and elevation forecasts for 2024-2027, as well as volumes of water in outflows for different water mangement strategies in NEPA supplemental...
Hydroacoustic estimates of fish density are used for fisheries management in central Lake Erie. Hydroacoustic data were collected along up to four cross-lake transects in central Lake Erie July 2010 through July 2019. Software-generated raw variables used for calculating estimates of hydroacoustic fish densities are presented here.
Categories: Data;
Tags: Aquatic Biology,
Great Lakes,
Lake Erie,
USGS Science Data Catalog (SDC),
aquatic biology,
Freshwater fish are among the most vulnerable taxa to climate change globally but are generally understudied in tropical island ecosystems. Climate change is predicted to alter the intensity, frequency, and variability of extreme flow events on the Caribbean island of Puerto Rico. These changes may impact Caribbean native and non-native stream ecosystems and biota complex ways. We compiled an extensive dataset of native and non-native fish assemblages collected at 119 sites across Puerto Rico from 2005 to 2015. We coupled these data with stream flow indices and dam height to understand how flow dynamics drive fish assemblage structure. Sixteen percent of sites contained exclusively non-native species, 34% contained...
Categories: Data,
Publication;
Types: Citation;
Tags: Aquatic Biology,
Caribbean,
Caribbean ecosystems,
Hydrology,
USGS Science Data Catalog (SDC),
This data release includes multispectral images and field measurements of water depth from the Sacramento River near Glenn, California, used to evaluate the potential for efficient reach-scale mapping of river bathymetry using Uncrewed Aircraft Systems (UAS). The images were acquired by a MicaSense RedEdge-MX Dual Camera deployed from a Trinity F90 vertical take-off and landing (VTOL) UAS. The 4 km long study area along the Sacramento River was subdivided into three distinct but adjacent areas of interest (AOIs) and image data were collected from one AOI each day between September 14 and 16, 2021. The image data were ortho-rectified using Quantum-Systems QBase 3D and Agisoft Metashape software and saved as GeoTIFF...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
California,
Geomorphology,
Glenn,
Hydrology,
The data support a study that surveyed the spatial distribution of Oncorhynchus mykiss and Cottus aleuticus eDNA in coastal streams of Big Sur, California, 2021-2022 following post-fire debris flows. The metadata represent qPCR quantification cycle (Cq) values for O. mykiss and C. aleuticus assays performed on water samples collected during June and July of 2021 and 2022 from the following streams: Big Creek, Mill Creek, Prewitt Creek, and Willow Creek. The metadata also includes the distance (meters) of each eDNA sample site from the stream mouth, volume of water (Liters) collected for eDNA analysis at each site, and the Y-intercept, slope, and R-squared value for each assay run.
This .zip file contains five products that will allow users to recreate the analyses and spatial data figures used in Sergeant et al. 2023, Hypoxia Vulnerability in the Salmon Watersheds of Southeast Alaska: 1) Hypoxia vulnerability calculations (.csv file) at water temperature monitoring sites, 2) Hypoxia vulnerability calculations (.csv file) for stream reaches near hatchery release sites, 3) Habitat characteristics (.csv file) at water temperature monitoring sites, 4) R code (.R file) for recreating Figure 3, modeled contours of the estimated number of pink salmon/m2 to create hypoxia in Southeast Alaska streams across all potential combinations of velocity, depth, and water temperature, 5) Esri map package (.mpk...
These data were compiled for modeling efforts of Bureau of Reclamation National Environmental Policy Act (NEPA) analyses for the Colorado River in Grand Canyon, Arizona. Objective(s) of our study were to forecast water temperature, smallmouth bass population growth rate, and smallmouth bass entrainment rates under different water management scenarios. These data represent forecasted smallmouth bass entrainment rates and smallmouth bass population growth rates. Data were collected in 2023 and 2024 by the Bureau of Reclamation CRMMS and then used by the U.S. Geological Survey-Southwest Biological Science Center-Grand Canyon Monitoring & Research Center in the modeling process. These data can be used to evaluate different...
This dataset includes otolith and water chemistry used for determining natal origins of individuals from six species. The dataset contains Sr:Ca and Ba:Ca of water samples for the Mississippi River and tributaries as well as otolith Sr, Ba, Mg values from fishes collected in navigation pools 4, 8, 13, and 26 of the Upper Mississippi River, as well as the Open River Reach of the Middle Mississippi River and the La Grange Pool of the Illinois River. Fishes included Bullhead Minnow, Emerald Shiner, Gizzard Shad, Bluegill, Orangespotted Sunfish, and Yellow Perch. Laser ablation inductively coupled mass spectrometry to quantify natal origins of these prey fish. Upwards of 50-75% of individuals at a given river reach...
Since 2005, the U.S. Geological Survey - Great Lakes Science Center's Lake Erie Biological Station (LEBS) has participated in a collaborative, multiagency effort to assess pelagic prey fish populations in the western (WB), central (CB), and eastern (EB) basins of Lake Erie through a combination of hydroacoustic and midwater trawl sampling. Assessing lake-wide distribution and abundance of pelagic prey species over time facilitates evaluation of large-scale drivers of fish production while also considering food-web dynamics at a smaller sub-basin scale. Information from this survey will support decision making within an ecosystem-based fishery management framework. In support of binational Great Lakes fishery management,...
This dataset includes georeferenced, high-resolution, airborne thermal infrared (TIR) and high-resolution true-color imagery, a polyline shapefile of the channel centerline, a polyline shapefile with TIR sample points for longitudinal stream temperature profiles, and a tabular file with longitudinal stream temperature profiles for the Donner und Blitzen River and its tributaries, Oregon. The aerial TIR surveys were conducted with a helicopter by NV5 Geospatial and are published as 17 raster mosaics in GeoTiff format with a resolution of 0.3 meters (m). The TIR mosaics contain corrected surface temperatures in degrees Celsius (C) (multiplied by 10 to create an unsigned integer pixel type). The longitudinal stream...
Categories: Data;
Tags: Aquatic Biology,
Donner und Blitzen River,
Geomorphology,
Harney County,
Hydrology,
Grass Carp Movement and Capture Data from the Sandusky River, Lake Erie, Ohio, USA from 2020 to 2022
Data includes grass carp position and sampling data from 2020 to 2022. We used grass carp that were implanted with acoustic transmitters. The position data was generated in Fathom Position from receivers that composed several VEMCO Positioning Systems (VPS). We also queried the Great Lakes Acoustic Telemetry Observation Network (GLATOS) to obtain non-VPS position detections from receivers made from multiple projects across Lake Erie and associated tributaries. Sampling data was downloaded from the grass carp capture database hosted on ArcGIS Online These data contain information such as location of event, time gears were deployed and retrieved, and number of grass carp caught.
Categories: Data;
Tags: Aquatic Biology,
Catchability,
Lake Erie,
Sandusky River,
USGS Science Data Catalog (SDC),
Note: this data release has been deprecated. Please see new data release here: https://doi.org/10.5066/P9DSOPHD. The U.S. Inland Creel and Angler Survey Catalog (CreelCat) contains data compiled from 14,766 creel and angler surveys conducted by state natural resource management agencies (including Washington DC and Puerto Rico) in inland waters across the United States. Data is are contained in eight .csv files which contain information about survey characteristics (Survey_Data.csv), angler effort (AngEffort_Data.csv), catch and harvest (FishDataCompiled.csv), angler demographics (Demographic_Data.csv), angler preferences (AngPrefDataCompiled.csv), taxonomic classifications (Taxa_Data.csv), issues with catch and...
The dataset includes Roundtail Chub and Flannelmouth Sucker detections at passive integrated transponder (PIT) tag antenna systems. We installed nine instream Biomark PIT-tag antenna systems (five 24-meter and four 9-meter antennas) in a pass-over orientation throughout the Blacks Fork subbasin. In addition to the fixed antennas, we used a Biomark inflatable antenna and two Biomark submersible PIT-tag antenna systems to increase detections.
In 2015-2018, the U.S. Geological Survey (USGS) in cooperation with the U.S. Environmental Protection Agency Great Lakes Restoration Initiative investigated the biodegradation of microcystins in source waters and sand filters from drinking-water plants in the Western Lake Erie Basin. Four source waters and three sand filtrate samples were collected from the intakes and sand filters of Lake Erie drinking-water plants and transported to the USGS Ohio Water Microbiology Laboratory, where investigators set up microcosms to enrich for and identify indigenous bacteria capable of degrading microcystins. Quality control samples were set up in the microcosms to check analyses and included positive controls, negative controls,...
These data were compiled to monitor native fishes (particularly humpback chub Gila cypha) in the Little Colorado River, in the Grand Canyon, AZ. Objective(s) of our study were to evaluate the timing of native fish migration and the abundance of migratory and resident fishes between the Colorado and Little Colorado Rivers in the Grand Canyon. These data represent encounter histories for fishes - including array detections and physical captures. These data were collected in the lower 13.56 river kilometers of the Little Colorado River in April and May of 2021 and 2022. These data were collected by U.S. Fish and Wildlife Service (physical captures) and U.S. Geological Survey (array detections). These data can be used...
This dataset includes field hydrologic measurements and laboratory analyses of surface and pore waters, sediments, benthic plants/biofilms, and biota along the Middle Snake River upgradient of the Hells Canyon Complex. The study region for this work focuses on a section of the Snake River heavily utilized for agriculture, with complex systems of irrigation diversion and return drainage, spanning 164 km above the Hells Canyon Complex (Idaho, Oregon). The goal of this study was to identify potential loading sources of methylmercury from the upgradient Snake River into the reservoir complex, with a focus on the tributaries, irrigation return drains, and riparian zones adjacent to agricultural lands along the river....
Field observations in a Lake Ontario embayment suggested that there is a phototaxic response of larval cisco that changes with development. This switch was verified using cultured cisco in a laboratory environment. These data include counts of cisco larvae at three depth ranges within multiple 95 liter tanks. Each tank of larvae were exposed to one of three different light treatments with three replicate tanks per treatment. Light treatments were 24 hours per day of light exposure, 24 hours per day in darkness, and a 12-hour light then 12-hour dark exposure cycle. Observations of cisco positioning within the water column were recorded periodically. The information collected included the date and time of the observation,...
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